IVF0021383 (gene) Melon (IVF77) v1

Overview


Name	IVF0021383
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	(thale cress) hypothetical protein
Location	chr06: 18924477 .. 18925165 (+)
RNA-Seq Expression	IVF0021383
Synteny	IVF0021383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATACACATTTTCCATATCCATAAAGAAAAATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAAATTTCCATTTTTCCTTTCTTTCTTTGTCCCGCTTCTCTTTGTAATAATATTGTATAACCCTTCACTAGTGTCAATAATTCCTTCTTTTTTGTCTCCCTCTTCCTCTCTCTCGTTTTAGCTCAGTTTCTCACTCCCTCTCTGGAAAAGCGTTGCATGCCATGATTATACGTTTTAAAAAAATATCATTCGTTACTACTGCCTAGCGATGACATATGGTCCACGGTTTGCACGGTTCTATGGCTTGAGAGAGATTACCATGTTTGTGATTACATAGCGGGAAGTCATACCGCCCCTCGCTACCAAAGTTAAAAGCTCCACTGAAGGAGGGAAAGAGAAAGGGAGAGATATAGAGAGAAAACTAGTCAGGAAAACAAACTAGAAAAGTTCATTTAATTTTCTTTTTAAAAGTAGGTCAAATCTAGTGAAGTTTTTAGGTATTTATTCCACTTT

mRNA sequence

AACATACACATTTTCCATATCCATAAAGAAAAATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAAATTTCCATTTTTCCTTTCTTTCTTTGTCCCGCTTCTCTTTGTAATAATATTGTATAACCCTTCACTAGTGTCAATAATTCCTTCTTTTTTGTCTCCCTCTTCCTCTCTCTCGTTTTAGCTCAGTTTCTCACTCCCTCTCTGGAAAAGCGTTGCATGCCATGATTATACGTTTTAAAAAAATATCATTCGTTACTACTGCCTAGCGATGACATATGGTCCACGGTTTGCACGGTTCTATGGCTTGAGAGAGATTACCATGTTTGTGATTACATAGCGGGAAGTCATACCGCCCCTCGCTACCAAAGTTAAAAGCTCCACTGAAGGAGGGAAAGAGAAAGGGAGAGATATAGAGAGAAAACTAGTCAGGAAAACAAACTAGAAAAGTTCATTTAATTTTCTTTTTAAAAGTAGGTCAAATCTAGTGAAGTTTTTAGGTATTTATTCCACTTT

Coding sequence (CDS)

ATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAA

Protein sequence

MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTCGALLKSYR

Homology

[Close]

BLAST of IVF0021383 vs. ExPASy TrEMBL
Match: A0A1S3BTI9 (uncharacterized protein LOC103493350 OS=Cucumis melo OX=3656 GN=LOC103493350 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.8e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. ExPASy TrEMBL
Match: A0A0A0L6J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099780 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+QKRKVRQTKPVAGTCSRCGRGAQVA+M+TSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLIHQKRKVRQTKPVAGTCSRCGRGAQVAEMKTSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. ExPASy TrEMBL
Match: A0A6J1J7Q2 (uncharacterized protein LOC111483321 OS=Cucurbita maxima OX=3661 GN=LOC111483321 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-29
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+Q+RKVR+TKPVAGTCSRCGRGA+VA+METSTTFCRIPIHST WKAIICSTC
Sbjct: 1  MVCFCFLIDQRRKVRRTKPVAGTCSRCGRGARVAEMETSTTFCRIPIHSTFWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. ExPASy TrEMBL
Match: A0A6J1EN99 (uncharacterized protein LOC111436040 OS=Cucurbita moschata OX=3662 GN=LOC111436040 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-29
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+Q+RKVR+TKPVAGTCSRCGRGA+VA+METSTTFCRIPIHST WKAIICSTC
Sbjct: 1  MVCFCFLIDQRRKVRRTKPVAGTCSRCGRGARVAEMETSTTFCRIPIHSTFWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. ExPASy TrEMBL
Match: A0A6J1EUI7 (uncharacterized protein LOC111436039 OS=Cucurbita moschata OX=3662 GN=LOC111436039 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+Q+R VR+TKPVAGTCSRCGRGA+VA+METSTTFCRIPIHST WKAIICSTC
Sbjct: 1  MVCFCFLIHQRRTVRRTKPVAGTCSRCGRGARVAEMETSTTFCRIPIHSTFWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. NCBI nr
Match: XP_008452279.1 (PREDICTED: uncharacterized protein LOC103493350 [Cucumis melo])

HSP 1 Score: 146 bits (368), Expect = 3.35e-44
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 68
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. NCBI nr
Match: XP_011650561.1 (uncharacterized protein LOC101205611 [Cucumis sativus])

HSP 1 Score: 141 bits (355), Expect = 3.24e-42
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+QKRKVRQTKPVAGTCSRCGRGAQVA+M+TSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLIHQKRKVRQTKPVAGTCSRCGRGAQVAEMKTSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 68
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. NCBI nr
Match: XP_022929486.1 (uncharacterized protein LOC111436040 [Cucurbita moschata] >XP_022985281.1 uncharacterized protein LOC111483321 [Cucurbita maxima] >XP_023553236.1 uncharacterized protein LOC111810712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136 bits (342), Expect = 3.13e-40
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+Q+RKVR+TKPVAGTCSRCGRGA+VA+METSTTFCRIPIHST WKAIICSTC
Sbjct: 1  MVCFCFLIDQRRKVRRTKPVAGTCSRCGRGARVAEMETSTTFCRIPIHSTFWKAIICSTC 60

Query: 61 GALLKSYR 68
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. NCBI nr
Match: XP_038905446.1 (uncharacterized protein LOC120091475 [Benincasa hispida])

HSP 1 Score: 136 bits (342), Expect = 3.13e-40
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+QK+KVR+TKPVAG CSRCGRGA+VA+METSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLIDQKKKVRRTKPVAGMCSRCGRGARVAEMETSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 68
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. NCBI nr
Match: XP_022929485.1 (uncharacterized protein LOC111436039 [Cucurbita moschata])

HSP 1 Score: 134 bits (336), Expect = 2.58e-39
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+Q+R VR+TKPVAGTCSRCGRGA+VA+METSTTFCRIPIHST WKAIICSTC
Sbjct: 1  MVCFCFLIHQRRTVRRTKPVAGTCSRCGRGARVAEMETSTTFCRIPIHSTFWKAIICSTC 60

Query: 61 GALLKSYR 68
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of IVF0021383 vs. TAIR 10
Match: AT3G15534.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52855.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 1.6e-26
Identity = 50/68 (73.53%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ +KP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of IVF0021383 vs. TAIR 10
Match: AT1G52855.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 7.5e-24
Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++Q RKV+++KP AGTCSRCG  A +ADM+TST FC IPI+  SW+A++CS C
Sbjct: 1  MVCFCFLVDQTRKVKRSKPAAGTCSRCGHCASIADMKTSTRFCFIPIYWRSWRAVVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of IVF0021383 vs. TAIR 10
Match: AT2G20835.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 66 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 6.0e-21
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          M  FCFL++Q++KVR  KP AG CSRCG GA VADM TST FC +P +  +WKAI+C  C
Sbjct: 1  MAIFCFLVDQRKKVRGRKPAAGLCSRCGGGAVVADMRTSTRFCGVPFYRKAWKAIVCHIC 60

Query: 61 GALLKSY 68
          GA+LKSY
Sbjct: 61 GAVLKSY 67

[Close]

BLAST of IVF0021383 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 7.1e-06
Identity = 21/63 (33.33%), Postives = 32/63 (50.79%), Query Frame = 0


Query: 2  VCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTCG 61
          +C  F+ +Q  +V       G C  CG   QV D+ +   FC +P+ + S +  +CSTCG
Sbjct: 1  MCLVFVCDQDERVIGRYAAPGACPYCGGAVQVVDVNSQWRFCFVPLSNKSKRRHLCSTCG 60

Query: 62 ALL 65
            L
Sbjct: 61 KRL 63

The following BLAST results are available for this feature:

BLAST of IVF0021383 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0021383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BTI9	5.8e-32	100.00	uncharacterized protein LOC103493350 OS=Cucumis melo OX=3656 GN=LOC103493350 PE=...	[more]
A0A0A0L6J9	1.9e-30	95.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099780 PE=4 SV=1	[more]
A0A6J1J7Q2	6.0e-29	91.18	uncharacterized protein LOC111483321 OS=Cucurbita maxima OX=3661 GN=LOC111483321...	[more]
A0A6J1EN99	6.0e-29	91.18	uncharacterized protein LOC111436040 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1EUI7	3.0e-28	89.71	uncharacterized protein LOC111436039 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]

BLAST of IVF0021383 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452279.1	3.35e-44	100.00	PREDICTED: uncharacterized protein LOC103493350 [Cucumis melo]	[more]
XP_011650561.1	3.24e-42	95.59	uncharacterized protein LOC101205611 [Cucumis sativus]	[more]
XP_022929486.1	3.13e-40	91.18	uncharacterized protein LOC111436040 [Cucurbita moschata] >XP_022985281.1 unchar...	[more]
XP_038905446.1	3.13e-40	91.18	uncharacterized protein LOC120091475 [Benincasa hispida]	[more]
XP_022929485.1	2.58e-39	89.71	uncharacterized protein LOC111436039 [Cucurbita moschata]	[more]

BLAST of IVF0021383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15534.1	1.6e-26	73.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G52855.1	7.5e-24	66.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G20835.1	6.0e-21	62.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G10695.1	7.1e-06	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33320	METHIONYL-TRNA SYNTHETASE	coord: 1..67
None	No IPR available	PANTHER	PTHR33320:SF12	BNACNNG72440D PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021383.1	IVF0021383.1	mRNA