IVF0020972 (gene) Melon (IVF77) v1

Overview


Name	IVF0020972
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr04: 23897097 .. 23906685 (+)
RNA-Seq Expression	IVF0020972
Synteny	IVF0020972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTTAAACATTGAGGCTATTCAAATAAGGAAGAAAAATAAGAGACTATTAAGAGATATTGCTACTTTGCATAATGAAGCTAAAGCTCAAAGGTGTGCATTAGAGAATTGAAACATGAGTTGGAAGGAGTGAACAATGTTGCCGTAGATTATCAAAGTGCATTGGAACAGCAAGCGACATCAACTCAAAGAATCACTGCAGAATTTGAGATTTTATAAAATTTGACTAAAGGATATAAAATATGGCTTACAGAAGAGCAGTGCAAAATGCACTTCTACGAAAGGCTGTTGCAAGTTCTGAACATCAGTTGTTGATTTGTCGTAATGCGCAAGAGGTGGTGACCGAAGATCATGCTCGATTAAAGAATGAGCATAAAGAAGTGTTAGCAGATTTTGCAATTTGGAGAGATGAATATAACATTATGAGGCCAAAAACAGATAGACAAGGAGCTGAAAAGCTGAAGCATATGGTAAAAATGGCAGATCAGTTTTCAACGCGAGCTACAGCCCTCCAACAAGACATCGTACCACACAACAGGCAATCGAGAGTTGTCTCGTTTCCTAGGGGCGACATGGAAAACAGGGATGGCTCGGCTAAGGCTTTGGAAACGGCTCGGGTAGGGGCGTCACAAACCATATATAGCCAACTTGAAAATATAATACATCAGTAGTGAACCTAAAAAGATATTACACATAATAGGAAAAAAGAGCGGAAAAAATGGAACAATTAAGATGAATATACCAAAAAATACAAAAGATAGTAATAATATATAAAAAGAAAAAAAATGAAACAACAGTGTACCCACACAAAATTGCCAAGCAAATAAAACAAGAAGATTAAGAATAATGTTTTAACTAAAAAACACAAAGAGAAATGGGCGGAAATATTTAAGACCATCAAAGAAAAATAAATTACACATCCAATCTCAAAATTAATGAAATATATGATCCAAATTTTTAAACAATAATATCACAACGAATGCATACATCGTGTGAATGTTCTAAGGTATAAATCTCCCCTAGTTCTAATAGTTCTACTTAAAAGAACATAGATGGAACAATAAGAAATGTTAAAAGAGAAGAGACCAAACAAAAGAAGAATAGAACAAACGAAAAAATAAATGAAAAATGTATTCTAAAGAATAATGAAACAAAGAAAAATAAATCTTCAAAAGAGACTTGGAAAAAGAACAAACATATATCAAACAAAAAGGAGAAATGTGTTAATATTTTATGCCAAACAAAATTTAACTAATACAATAAGAAATGTTTATAAAAAGAGAACAACAATAGAGGTTGAAAACAACTTGAGCTATCCAAGAAAAATAATTACCGTAAGAAATGAAAAAGAAAGCTTAATGGGTCGTACATTGGGCCAAATATCTTCAAACAGGGAAGAAAGCCCAGGAGTAAACCTCTCAAGCTTGTCAGCCATAGCTGTTATATTGGGCTTTGGCTCATATTGTTGTAGTTGACTTTGTTTAGAAGTGGGCTTATTTAAGCCCAACAAGAAAACCGAAGAAGTTACTTAACAATCTAACATAATCAAATATATATATATATATACTTCTCTACAAAAATCTAACAAATCGATACAAAAGTAGAATTAAGAAAATAATACACAAAAGCGAAATTAGACAATGCCACAATAGAAGAAGGATTTTTTTTTAAATAACAGAACAATATAAAACAAATGTCCTGTAAGAATATAAAAAAGAACAAAATAACCATAATGTAATCAAGAAGAGATAATGTTACATATCTTGATACGATGACAAAATAACATTGCTATAATTAGAACTCACGAAAATAATAGAGAATGAAACAAAGGAATGTGTACCAAATAATTAATAGAGCCATTCAAAGAAGAAGAGACAACATTCCAAAAATTAACAATGTATCAAATAATTGTAAAACCAAAAAAACAAAAGGAGAATCCACGGTGCCAAAAGGAAAATAAAATTCAACACAACTAAGAAAATCTACGTAGAATAGAAAATACTAGACGACAAAAATAAATTGAGAAAATTAAAAAAAAAAAAAAAATCAAACATGGACATTATCCACACCTACTAGTCGTAAAACACAATATCATATTTGACTTTCATAAAAAGTTCCATCCATCATCCTCACAGTAAAAACCAATCAGTACCATATGTAAAATATCCAACAAATCAACCTACTAAACAATAGTGGACATGAAAATATAATATAACAAAAGTGAAACTAAAAAGTATCACACAATAGAAAAAAGATTGAAAAAATAGAACTAAGATGATATACTTACCTTTTCAAGAAAAAAATATGAATATACTAAAAAACACCAAATGCAAACCATAATTTGTCAACCGGACAGATAATAATAATATAAAAAAGGTGAACAAAAAAACGTACCCAGCACAAAATTGGCAAGCAAAATAAAAGAAGACTAAGAGTAATGTTATAATTAAAAGACAGACCAACACAAGGAGAAAATAGTGAAAATATTTAAAACCATACAAAAAGTAAATCAAACATCTAATCTTAAAGAAATGAAATATATGATCCAAATTTACAGCAAACGAATAAATAACAGTAAAATTTTTAGCAATAGTAGTAGAACAACAACAAAAAAAAAGTTCAACCGTCATAGGGGTGTTTTCTCCCCTAGTCCCGATTATTGAACTTAAAAGAAAACCAGGCAATAAAACAACAAGAAATGTTAAATAAAGAGAAAAGACAGAACAAAGGAGAAATAAATCTCTAAAAGAGAATTTAAAAATTGTCTAGTAATATTAGCCTAACCGAACAATCACAAAAATAATAAAACAAAAAAAAATCTAATTAAAGAATAACAAACGTCACAGTAAAAGAGAACAACACATAAATGGTGAAGACAATTTGAGCTATCCAAGAAAAATAAAAATGAAATAAAACCAAAGACTGTCAAATAAAACAAAGGCAAAGGGTGAAAAAAATATGATAGGATTCCAAAAGATAAATAAAATAATCTTCTTCAAAAGAAAAAGGTAATAATAGAAAAATATACCAAATACACATAATACAATCCACAATTGTCTAGTGAGCTAAATAGATATGATTCTAAAACAATAATGAAACAGGAAAAAAATATCTTTGAAAGAGAATGAGAGAACAGAAAAAATATAATTAGTAATCGTATGCACGATACCTAATAAATCAACATACTAAATAACAACCGACTTAAAAATATAATACAACAAAAGTGAAACTAAAATGATATCGCACAATAGGAAAAAAGAGCAAAAACAAGAGCAAAAAACATGGAACAATTCAGATGAATATACCAAAAAACACAAAATTCTAATAATATAGAAAAAGTGAAACAAAACAACTTACCACAACTTACCACATTGCCAAGCAAAATAAAAATTTAAGAATAATGTTTTAACTAAAAGACAACACAAAACAGAAAAGGGCGAAATATTTAATAACCAATACATCTGATCTCAGAGAAATGAAATATATGATCCAAATTTTCAAAAAATAATATTACAGCGAAAAAATTAAAATTAACAATAGCAATAGAAACACAATAAAAAAGAAATAATTAAAAAAGAAAAGAAAAAATAGTTCAACCATCGTTAGAACACTGTTCTAAGGTTTGAATCTTCCTTAATCCCAATATAGTGGTACTTAAAAAAGCATGGTAGAACGACAAGAAATATTAAATAAAGAGAACAGACAGAACAAAAGAAGAATAGAAAACAAAGGAGAAAATTAATGAAAAATAAATCTTTAAAGAGAAATAGAATAAAAAGAAGAATCAACAAGAAAAAGAAACAAACATATACAAACTCGAAGGGAGTATTATTTCAACAAGAAATGTGCCAAACAAAATTTAACTAAAAGAATAAGAAATGTCACTATAAAAGAGAGCAACACACAGAGAAAGGGTGAAAACAATTTATCCAAGAAAAATAAATTTATTGTCTAAAAAATGAAATAAACAATAGTACCAAAAGAATGTCAAATAAAAGAGAGCGACAACAGACAAAGTGTGAAAAAACTATAAACCATGATATAATACCAAAAGATGAATAAGATAATCTACTTCGAAAAGAAAAAAAAAGGTACCAAAAGAAAAATGAACCAAAAATATTAACAAACAAATAAGGAAGAAAAAAACAATGCACCATATACACAAATACAATCCACAATAGTTAAGAGAGTTAAACATAAATTGCTCTAAAAGCAATAATGAAATAGACAAAATAAATTTCTAAAAGAGAATAAGGAACACAAAAGCTTTTAAGAAAATATTTTGTATATAGAATAATATTTGTACACTACTAGTAATAATAAAAATAGTAACAGAAATAATGTTTTTGGATACACTTTTTAAAAGAAAGTTTTTGCAAAAAAAAAAATAAGAGAGGAAAACGTTATGCAGAACTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAGAATCATCATAGGCTGTACATGGAAACATGTCAACGGCTAATACAGTATACATATATAGGATTTAGCTACAATTAAGCATTAGGCTGCAATTATACCATATTTAACATCCAGCGTAATTATAGGAATAGATTAACGGCTAATTGTACAAGCCAATTATAAATAGATATATACTCTTCTGTAAAGAATAAGAACAACAATCCTTTTATTTTAAATCAATACCTTCTTAAAATCTTCATGGTATCAGAGCAATTTGATCCCAATTTCAAGCTCTCAGACCAAGCACAAAGGTGCCATTAGCAAGCAGTACTCAACGCCACAAAGGTGACGAAACTTCTGCTGCATCAATTCAAATTTGTCCTCATCGAGCAAAACATAACCGAGGGAGACAACCAGTGGAAAGGAACAAGGAAAGCATCTGTTCTTCTCAGCAAAAATCAGCAAAATCAGTATCAATTTAAAACTGTTCTTTTCTTTGTTATTTTTCTCTCTGGATTACATTTCTGCTACCAGCAACTTAACATGATCGAAAACAACAAAATCACCACATATATCCTCACTGGTAACAATAACTACGTACCATGGGCCAGATCTGTGGAAATAGGCTTAGGGGGTAAGGGTAAAAGGTCATTCATTAATGGATCCAAAGGAAAACCAAAACCAAAAGACCAAGCCAACCCTACTGATGATGAACTAACAGCCATAGAAAATTGGGAGACCACAGATCAGATGATCATGTCGTGGCTCTTAAGCACAATGGACACTAAAATCTCTAGTGCTCTTATGTACTGTAAAACCTCAAAGGAAATCTGGACAAAAGCCAAAACCCGATATGGTCAAGGAAAAAACTTCGCACATATTTTTTCATTAAAACAAGAACTTTCCAACATCAAACAAGGCAACCTCAATAACTCAGACCTAGTGGCCGAAATACTGACCAAATGGGAAGAGTTACAGATGTATCTCCCAGAAACAATAAATCCAGAGGAAATTTACAAAAGAAACGAACATGAATTAATTTATACTTATCTCGGGGCTTTAGATTCCAGTTTTGAACCCATTCGGGCTCAAATTCTCTCATCGGCAGAAATGCCACAGTTTGATGATGTAGTTCTCAAGATTGAGCAGGAGGAATCAAGAAGACGGCTCATGAATCCGTCGCCAGCTCCATCAACAGACAACCAAGCATTTCGCGCAACCTACAACAAGGACAGAGGAAAGGGGAACTTGTGGTGTGATCATTGCAAACGATCGAGTCACAACAAGGAGAGTTGCTGGGTTCTTCATCCGCATCTCAAGCCCCAACGCAAAGGTGGCGGAAGTACCAACAACGGCGGGTGGCGCCGAGAGGCACATTCCGCCATAGGAGAACTCAACAGCGGGACAAATACGAAGGCTGACTTCGGGATGAATGGGATGAACCCTAATCCCTCTCAAGGGCCAGCTGATCACGGGCCACCAGGCTTCTATGGAACGACTGCTGCTGGGCCAGTGCAAGGCCCAATCTCCTTTGTCACGCCTGCTGGGCCTTCCGGACCTAATTCGGATCAACTCATGCAGCTGGTTAACCAATTAAATCAACTACTTCAGCCGAGGCAACAGAACTCAGGTTTATCTGAACTCAAACTTTCAAATAATTCAATATACTTGAATAAGCATGACTCAAATTGGATTATTGATTCGGGAGCAACGCATCACATGTCATGTAGTCCAAACAATTTTTTAAACTTGATAACCTCCAATGAACCACAATTTGTCACAACTGCTAATGGTGGTCAGACCAAAATTTTCGGTACCGGAACCATTTCTGTTTTTAACAAACCAGTCAATGAGGTTTTGTATCTACCTGATTTTCACTCTAATTTATTATCTGTTAATAAGATTGTCAAAGATCTTAATTGTGCTGTAATATTCTTACCAGAAAAAGTGATTTTTCAGGACATAGTCTCAGGGGAGATGATTGGTGAAGGAATTCTTAGGAACGGGCTATATTATCTTCAACAAAATAATAAATGCTTTGTATCAAGTAAAAACACTGATCGTGGACATTTATTGCATTTAAGATTTGGCCATCCATCTGATCAGGTTTTGAATAGACTTTTTCATTATAATTATGATTCCTTTAGTTGTGATACTTGTAGATTTGCAAAACAAACTCGTTTACCTTTTCCTACTTCCATAACTAAAGTAGAAAAATGTTTTGATTTAATTCATTCTGATGTTTGGGGACCTTCTCCCGAAGAATCATACAATCATTATAAATACTATGTTACATTCATTGATGATTTTTCAAAAACTACTTGGGTATATCTTTTAAAAACCAAAAATGAAGTCTTCTCATGCTTTCAAGAATTTTTTAATTTTATTACCAACCAATACAATGCTCAAGTCAAAATTTTTCGATCTGACAATGGTACTGAGTATGTGAATAAGGAATTCACCAATTTTTTCAAACAACATGGTATTCTTCATCAAACAACATGTACTCATACACCACAACAAAATGGAGTTTCTGAAAGAAAAAACAGACATCTTCTTGAAAAAACAAGAGCTTTACTACTTCAGAATAATGTTCCAAAAAAATTCTGGTCAGATGCAATTCTAACTGCTACTTATATCATAAATAGATTACCAAGCCCAAATCTCAATAATTTAAGTCCTCTTGAAATTCTCAAAGGAAGAAAAATCGACTTAGATCATATTAGAGTATTTGGATGCACCTGCTTTGTATATATAAAACGAAAGGACAAACTAGATAAAAACTCTGTGAAAACTATTTTTCTTGGCTACTCCTCAACCCAAAAGGGATACAAGTGCTTTGATCCCGAACAAAATAAACTGTATATTTCCAGGGATGTAGTTTTCAGAGAGCATGAACCATTCTTCACGCCTACACAAGACACCACCGCTGCAACACCAAGCACTCTGCAATTCCTCTTTCCTTCCCTTGACGATGAAGAAAATCCTTCCGCATCTTCTTCAGGGGGAGATTATGAGGATGAACGGAACAATACAGAAGACAGACAAGAAGAAGAAGGAGAAGATACAATCAGACGACGATCAACACGAACAAGGCAACCTTCAACAAGGTTAAGGGATTTTGTATCCCATCAGGTTTTGTATCCTATCCAAAATTTTATTAATTACAACAAGGTATCACCAACCTACCAGATTTATTTAAGCAAACTTGACGGTAACAATGAACCAAACACGTATGACGAGGCCAAACAACAGACCATATGGATTCAAGCCATGAATGAAGAATTAAAAGCCTTAGAACAAAACAACACATGGGATATGGTAGAACTACCCAAAGGTAAGAAACCAGTAGGATGCAAATGGGTCTATAAAATAAAATATAACAGTGATGGCACAGTTGAAAGGTATAAAGCCAGATTAGTTGCCAAAGGTTTCACCCAAACATACGGCATTGACTATCAAGAAACATTTGCCCCTGTAGCAAAAATGAACACTTTTAGGATATTAATGTCAGTAGCAACCAATCATGGGTGGGATCTGTTCCAAATGGATGTAAAAAATGCTTTCTTACAAGGAGATCTAGAGGAGGAAGTTTACATGACACCCCCACCAGGGTATTTCGAAACCTCCAAGGTATGCAAACTTCGAAAGGCTATTTATGGCCTTAAACAGTCACCAAGAGCTTGGTATGCCAAACTTAGTACTTTTCTCACAGAAAATAATTTCAAGAAGAGCACTGCAGACTGCTCTGTGTTCATAAGAAAGAATGGTGACTCAATTACTATTATTTTAGTTTATGTGGATGATATTATCATTTCCGGTAATAACAACCAAAAATTAAAAGAAGTCAAAGAAATGTTAAAAAGAAAATTTGACATAAAAGATCTGGGTAAACTCTCATACTTTCTAGGAATAGAAATAGCACACTCGACAAAAGGACTGTTTTTATCCCAAAGAAAGTATACACTAGATCTACTAAAAGAAACTGGTAAATTAGGTACCAAACCAGCCACTAGTCCAATGGAAACCAACATCAAATTAAACACTGAGGATGGTAAACCACTATCAGGCATAAGCCAATATCAAAGGATAGTTGGAAAATTAATCTACCTAACCGTTACTAGACCTGATATTACATTTGCAGTTAGCATAGTAAGCCAATTCATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAGAATCATCATAGGCTGTACATGGAAACATGTCAACGGCTAATACAGTATACATATATAGGATTTAGCTACAATTAAGCATTAGGCTGCAATTATACCATATTTAACATCCAGCGTAATTATAGGAATAGATTAACGGCTAATTGTACAAGCCAATTATAAATAGATATATACTCTTCTGTAAAGAATAAGAACAACAATCCTTTTATTTTAAATCAATACCTTCTTAAAATCTTCAAGAACTTTTGGCAAAAAATTGAAGAAAGAAAACTTTGAGAGCAAAGAAAAAAAAGTTTCGAAAAGTTCATGAAAAGGTATCTTTGCAAAAAAAACAAATTGAAGAGATCGATATTT

mRNA sequence

ATGGATTCTTTAAACATTGAGGCTATTCAAATAAGGAAGAAAAATAAGAGACTATTAAGAGATATTGCTACTTTGCATAATGAAGCTAAAGCTCAAAGAAGAGCAGTGCAAAATGCACTTCTACGAAAGGCTGTTGCAAGTTCTGAACATCAGTTGTTGATTTGTCGTAATGCGCAAGAGGTGGTGACCGAAGATCATGCTCGATTAAAGAATGAGCATAAAGAAGTGTTAGCAGATTTTGCAATTTGGAGAGATGAATATAACATTATGAGGCCAAAAACAGATAGACAAGGAGCTGAAAAGCTGAAGCATATGGTAAAAATGGCAGATCAGTTTTCAACGCGAGCTACAGCCCTCCAACAAGACATCGTACCACACAACAGGCAATCGAGAGTTGTCTCGTTTCCTAGGGGCGACATGGAAAACAGGGATGGCTCGGCTAAGGCTTTGGAAACGGCTCGGCAACTTAACATGATCGAAAACAACAAAATCACCACATATATCCTCACTGGTAACAATAACTACGTACCATGGGCCAGATCTGTGGAAATAGGCTTAGGGGGTAAGGGTAAAAGGTCATTCATTAATGGATCCAAAGGAAAACCAAAACCAAAAGACCAAGCCAACCCTACTGATGATGAACTAACAGCCATAGAAAATTGGGAGACCACAGATCAGATGATCATGTCGTGGCTCTTAAGCACAATGGACACTAAAATCTCTAGTGCTCTTATGTACTGTAAAACCTCAAAGGAAATCTGGACAAAAGCCAAAACCCGATATGGTCAAGGAAAAAACTTCGCACATATTTTTTCATTAAAACAAGAACTTTCCAACATCAAACAAGGCAACCTCAATAACTCAGACCTAGTGGCCGAAATACTGACCAAATGGGAAGAGTTACAGATGTATCTCCCAGAAACAATAAATCCAGAGGAAATTTACAAAAGAAACGAACATGAATTAATTTATACTTATCTCGGGGCTTTAGATTCCAGTTTTGAACCCATTCGGGCTCAAATTCTCTCATCGGCAGAAATGCCACAGTTTGATGATGTAGTTCTCAAGATTGAGCAGGAGGAATCAAGAAGACGGCTCATGAATCCGTCGCCAGCTCCATCAACAGACAACCAAGCATTTCGCGCAACCTACAACAAGGACAGAGGAAAGGGGAACTTGTGGTGTGATCATTGCAAACGATCGAGTCACAACAAGGAGAGTTGCTGGGTTCTTCATCCGCATCTCAAGCCCCAACGCAAAGGTGGCGGAAGTACCAACAACGGCGGGTGGCGCCGAGAGGCACATTCCGCCATAGGAGAACTCAACAGCGGGACAAATACGAAGGCTGACTTCGGGATGAATGGGATGAACCCTAATCCCTCTCAAGGGCCAGCTGATCACGGGCCACCAGGCTTCTATGGAACGACTGCTGCTGGGCCAGTGCAAGGCCCAATCTCCTTTGTCACGCCTGCTGGGCCTTCCGGACCTAATTCGGATCAACTCATGCAGCTGGTTAACCAATTAAATCAACTACTTCAGCCGAGGCAACAGAACTCAGGTTTATCTGAACTCAAACTTTCAAATAATTCAATATACTTGAATAAGCATGACTCAAATTGGATTATTGATTCGGGAGCAACGCATCACATGTCATGTAGTCCAAACAATTTTTTAAACTTGATAACCTCCAATGAACCACAATTTGTCACAACTGCTAATGGTGGTCAGACCAAAATTTTCGGTACCGGAACCATTTCTGTTTTTAACAAACCAGTCAATGAGGTTTTGTATCTACCTGATTTTCACTCTAATTTATTATCTGTTAATAAGATTGTCAAAGATCTTAATTGTGCTGTAATATTCTTACCAGAAAAAGTGATTTTTCAGGACATAGTCTCAGGGGAGATGATTGGTGAAGGAATTCTTAGGAACGGGCTATATTATCTTCAACAAAATAATAAATGCTTTGTATCAAGTAAAAACACTGATCGTGGACATTTATTGCATTTAAGATTTGGCCATCCATCTGATCAGGTTTTGAATAGACTTTTTCATTATAATTATGATTCCTTTAGTTGTGATACTTGTAGATTTGCAAAACAAACTCGTTTACCTTTTCCTACTTCCATAACTAAAGTAGAAAAATGTTTTGATTTAATTCATTCTGATGTTTGGGGACCTTCTCCCGAAGAATCATACAATCATTATAAATACTATGTTACATTCATTGATGATTTTTCAAAAACTACTTGGGTATATCTTTTAAAAACCAAAAATGAAGTCTTCTCATGCTTTCAAGAATTTTTTAATTTTATTACCAACCAATACAATGCTCAAGTCAAAATTTTTCGATCTGACAATGGTACTGAGTATGTGAATAAGGAATTCACCAATTTTTTCAAACAACATGGTATTCTTCATCAAACAACATGTACTCATACACCACAACAAAATGGAGTTTCTGAAAGAAAAAACAGACATCTTCTTGAAAAAACAAGAGCTTTACTACTTCAGAATAATGTTCCAAAAAAATTCTGGTCAGATGCAATTCTAACTGCTACTTATATCATAAATAGATTACCAAGCCCAAATCTCAATAATTTAAGTCCTCTTGAAATTCTCAAAGGAAGAAAAATCGACTTAGATCATATTAGAGTATTTGGATGCACCTGCTTTGTATATATAAAACGAAAGGACAAACTAGATAAAAACTCTGTGAAAACTATTTTTCTTGGCTACTCCTCAACCCAAAAGGGATACAAGTGCTTTGATCCCGAACAAAATAAACTGTATATTTCCAGGGATGTAGTTTTCAGAGAGCATGAACCATTCTTCACGCCTACACAAGACACCACCGCTGCAACACCAAGCACTCTGCAATTCCTCTTTCCTTCCCTTGACGATGAAGAAAATCCTTCCGCATCTTCTTCAGGGGGAGATTATGAGGATGAACGGAACAATACAGAAGACAGACAAGAAGAAGAAGGAGAAGATACAATCAGACGACGATCAACACGAACAAGGCAACCTTCAACAAGGTTAAGGGATTTTGTATCCCATCAGGTTTTGTATCCTATCCAAAATTTTATTAATTACAACAAGGTATCACCAACCTACCAGATTTATTTAAGCAAACTTGACGGTAACAATGAACCAAACACGTATGACGAGGCCAAACAACAGACCATATGGATTCAAGCCATGAATGAAGAATTAAAAGCCTTAGAACAAAACAACACATGGGATATGGTAGAACTACCCAAAGGTAAGAAACCAGTAGGATGCAAATGGGTCTATAAAATAAAATATAACAGTGATGGCACAGTTGAAAGGTATAAAGCCAGATTAGTTGCCAAAGGTTTCACCCAAACATACGGCATTGACTATCAAGAAACATTTGCCCCTGTAGCAAAAATGAACACTTTTAGGATATTAATGTCAGTAGCAACCAATCATGGGTGGGATCTGTTCCAAATGGATGTAAAAAATGCTTTCTTACAAGGAGATCTAGAGGAGGAAGTTTACATGACACCCCCACCAGGGTATTTCGAAACCTCCAAGGTATGCAAACTTCGAAAGGCTATTTATGGCCTTAAACAGTCACCAAGAGCTTGGTATGCCAAACTTAGTACTTTTCTCACAGAAAATAATTTCAAGAAGAGCACTGCAGACTGCTCTGTGTTCATAAGAAAGAATGGTGACTCAATTACTATTATTTTAGTTTATGTGGATGATATTATCATTTCCGGTAATAACAACCAAAAATTAAAAGAAGTCAAAGAAATGTTAAAAAGAAAATTTGACATAAAAGATCTGGGTAAACTCTCATACTTTCTAGGAATAGAAATAGCACACTCGACAAAAGGACTGTTTTTATCCCAAAGAAAGTATACACTAGATCTACTAAAAGAAACTGGTAAATTAGGTACCAAACCAGCCACTAGTCCAATGGAAACCAACATCAAATTAAACACTGAGGATGGTAAACCACTATCAGGCATAAGCCAATATCAAAGGATAGTTGGAAAATTAATCTACCTAACCGTTACTAGACCTGATATTACATTTGCAGTTAGCATAGTAAGCCAATTCATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAGAATCATCATAGGCTGTACATGGAAACATGTCAACGGCTAATACAGTATACATATATAGGATTTAGCTACAATTAAGCATTAGGCTGCAATTATACCATATTTAACATCCAGCGTAATTATAGGAATAGATTAACGGCTAATTGTACAAGCCAATTATAAATAGATATATACTCTTCTGTAAAGAATAAGAACAACAATCCTTTTATTTTAAATCAATACCTTCTTAAAATCTTCAAGAACTTTTGGCAAAAAATTGAAGAAAGAAAACTTTGAGAGCAAAGAAAAAAAAGTTTCGAAAAGTTCATGAAAAGGTATCTTTGCAAAAAAAACAAATTGAAGAGATCGATATTT

Coding sequence (CDS)

ATGGATTCTTTAAACATTGAGGCTATTCAAATAAGGAAGAAAAATAAGAGACTATTAAGAGATATTGCTACTTTGCATAATGAAGCTAAAGCTCAAAGAAGAGCAGTGCAAAATGCACTTCTACGAAAGGCTGTTGCAAGTTCTGAACATCAGTTGTTGATTTGTCGTAATGCGCAAGAGGTGGTGACCGAAGATCATGCTCGATTAAAGAATGAGCATAAAGAAGTGTTAGCAGATTTTGCAATTTGGAGAGATGAATATAACATTATGAGGCCAAAAACAGATAGACAAGGAGCTGAAAAGCTGAAGCATATGGTAAAAATGGCAGATCAGTTTTCAACGCGAGCTACAGCCCTCCAACAAGACATCGTACCACACAACAGGCAATCGAGAGTTGTCTCGTTTCCTAGGGGCGACATGGAAAACAGGGATGGCTCGGCTAAGGCTTTGGAAACGGCTCGGCAACTTAACATGATCGAAAACAACAAAATCACCACATATATCCTCACTGGTAACAATAACTACGTACCATGGGCCAGATCTGTGGAAATAGGCTTAGGGGGTAAGGGTAAAAGGTCATTCATTAATGGATCCAAAGGAAAACCAAAACCAAAAGACCAAGCCAACCCTACTGATGATGAACTAACAGCCATAGAAAATTGGGAGACCACAGATCAGATGATCATGTCGTGGCTCTTAAGCACAATGGACACTAAAATCTCTAGTGCTCTTATGTACTGTAAAACCTCAAAGGAAATCTGGACAAAAGCCAAAACCCGATATGGTCAAGGAAAAAACTTCGCACATATTTTTTCATTAAAACAAGAACTTTCCAACATCAAACAAGGCAACCTCAATAACTCAGACCTAGTGGCCGAAATACTGACCAAATGGGAAGAGTTACAGATGTATCTCCCAGAAACAATAAATCCAGAGGAAATTTACAAAAGAAACGAACATGAATTAATTTATACTTATCTCGGGGCTTTAGATTCCAGTTTTGAACCCATTCGGGCTCAAATTCTCTCATCGGCAGAAATGCCACAGTTTGATGATGTAGTTCTCAAGATTGAGCAGGAGGAATCAAGAAGACGGCTCATGAATCCGTCGCCAGCTCCATCAACAGACAACCAAGCATTTCGCGCAACCTACAACAAGGACAGAGGAAAGGGGAACTTGTGGTGTGATCATTGCAAACGATCGAGTCACAACAAGGAGAGTTGCTGGGTTCTTCATCCGCATCTCAAGCCCCAACGCAAAGGTGGCGGAAGTACCAACAACGGCGGGTGGCGCCGAGAGGCACATTCCGCCATAGGAGAACTCAACAGCGGGACAAATACGAAGGCTGACTTCGGGATGAATGGGATGAACCCTAATCCCTCTCAAGGGCCAGCTGATCACGGGCCACCAGGCTTCTATGGAACGACTGCTGCTGGGCCAGTGCAAGGCCCAATCTCCTTTGTCACGCCTGCTGGGCCTTCCGGACCTAATTCGGATCAACTCATGCAGCTGGTTAACCAATTAAATCAACTACTTCAGCCGAGGCAACAGAACTCAGGTTTATCTGAACTCAAACTTTCAAATAATTCAATATACTTGAATAAGCATGACTCAAATTGGATTATTGATTCGGGAGCAACGCATCACATGTCATGTAGTCCAAACAATTTTTTAAACTTGATAACCTCCAATGAACCACAATTTGTCACAACTGCTAATGGTGGTCAGACCAAAATTTTCGGTACCGGAACCATTTCTGTTTTTAACAAACCAGTCAATGAGGTTTTGTATCTACCTGATTTTCACTCTAATTTATTATCTGTTAATAAGATTGTCAAAGATCTTAATTGTGCTGTAATATTCTTACCAGAAAAAGTGATTTTTCAGGACATAGTCTCAGGGGAGATGATTGGTGAAGGAATTCTTAGGAACGGGCTATATTATCTTCAACAAAATAATAAATGCTTTGTATCAAGTAAAAACACTGATCGTGGACATTTATTGCATTTAAGATTTGGCCATCCATCTGATCAGGTTTTGAATAGACTTTTTCATTATAATTATGATTCCTTTAGTTGTGATACTTGTAGATTTGCAAAACAAACTCGTTTACCTTTTCCTACTTCCATAACTAAAGTAGAAAAATGTTTTGATTTAATTCATTCTGATGTTTGGGGACCTTCTCCCGAAGAATCATACAATCATTATAAATACTATGTTACATTCATTGATGATTTTTCAAAAACTACTTGGGTATATCTTTTAAAAACCAAAAATGAAGTCTTCTCATGCTTTCAAGAATTTTTTAATTTTATTACCAACCAATACAATGCTCAAGTCAAAATTTTTCGATCTGACAATGGTACTGAGTATGTGAATAAGGAATTCACCAATTTTTTCAAACAACATGGTATTCTTCATCAAACAACATGTACTCATACACCACAACAAAATGGAGTTTCTGAAAGAAAAAACAGACATCTTCTTGAAAAAACAAGAGCTTTACTACTTCAGAATAATGTTCCAAAAAAATTCTGGTCAGATGCAATTCTAACTGCTACTTATATCATAAATAGATTACCAAGCCCAAATCTCAATAATTTAAGTCCTCTTGAAATTCTCAAAGGAAGAAAAATCGACTTAGATCATATTAGAGTATTTGGATGCACCTGCTTTGTATATATAAAACGAAAGGACAAACTAGATAAAAACTCTGTGAAAACTATTTTTCTTGGCTACTCCTCAACCCAAAAGGGATACAAGTGCTTTGATCCCGAACAAAATAAACTGTATATTTCCAGGGATGTAGTTTTCAGAGAGCATGAACCATTCTTCACGCCTACACAAGACACCACCGCTGCAACACCAAGCACTCTGCAATTCCTCTTTCCTTCCCTTGACGATGAAGAAAATCCTTCCGCATCTTCTTCAGGGGGAGATTATGAGGATGAACGGAACAATACAGAAGACAGACAAGAAGAAGAAGGAGAAGATACAATCAGACGACGATCAACACGAACAAGGCAACCTTCAACAAGGTTAAGGGATTTTGTATCCCATCAGGTTTTGTATCCTATCCAAAATTTTATTAATTACAACAAGGTATCACCAACCTACCAGATTTATTTAAGCAAACTTGACGGTAACAATGAACCAAACACGTATGACGAGGCCAAACAACAGACCATATGGATTCAAGCCATGAATGAAGAATTAAAAGCCTTAGAACAAAACAACACATGGGATATGGTAGAACTACCCAAAGGTAAGAAACCAGTAGGATGCAAATGGGTCTATAAAATAAAATATAACAGTGATGGCACAGTTGAAAGGTATAAAGCCAGATTAGTTGCCAAAGGTTTCACCCAAACATACGGCATTGACTATCAAGAAACATTTGCCCCTGTAGCAAAAATGAACACTTTTAGGATATTAATGTCAGTAGCAACCAATCATGGGTGGGATCTGTTCCAAATGGATGTAAAAAATGCTTTCTTACAAGGAGATCTAGAGGAGGAAGTTTACATGACACCCCCACCAGGGTATTTCGAAACCTCCAAGGTATGCAAACTTCGAAAGGCTATTTATGGCCTTAAACAGTCACCAAGAGCTTGGTATGCCAAACTTAGTACTTTTCTCACAGAAAATAATTTCAAGAAGAGCACTGCAGACTGCTCTGTGTTCATAAGAAAGAATGGTGACTCAATTACTATTATTTTAGTTTATGTGGATGATATTATCATTTCCGGTAATAACAACCAAAAATTAAAAGAAGTCAAAGAAATGTTAAAAAGAAAATTTGACATAAAAGATCTGGGTAAACTCTCATACTTTCTAGGAATAGAAATAGCACACTCGACAAAAGGACTGTTTTTATCCCAAAGAAAGTATACACTAGATCTACTAAAAGAAACTGGTAAATTAGGTACCAAACCAGCCACTAGTCCAATGGAAACCAACATCAAATTAAACACTGAGGATGGTAAACCACTATCAGGCATAAGCCAATATCAAAGGATAGTTGGAAAATTAATCTACCTAACCGTTACTAGACCTGATATTACATTTGCAGTTAGCATAGTAAGCCAATTCATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAG

Protein sequence

MDSLNIEAIQIRKKNKRLLRDIATLHNEAKAQRRAVQNALLRKAVASSEHQLLICRNAQEVVTEDHARLKNEHKEVLADFAIWRDEYNIMRPKTDRQGAEKLKHMVKMADQFSTRATALQQDIVPHNRQSRVVSFPRGDMENRDGSAKALETARQLNMIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAIENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELSNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIRAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDHCKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMNPNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQTKIFGTGTISVFNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMIGEGILRNGLYYLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYIKRKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVVFREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGEDTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS

Homology

[Close]

BLAST of IVF0020972 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.4e-204
Identity = 497/1532 (32.44%), Postives = 745/1532 (48.63%), Query Frame = 0


Query: 146  SAKALETARQLNMIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKP- 205
            +A A E       I N  ++      + NY+ W+R V     G     F++GS   P   
Sbjct: 2    AAHAEELVLNNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPAT 61

Query: 206  --KDQANPTDDELTAIENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYG 265
               D A   + + T    W+  D++I S +L  +   +  A+    T+ +IW   +  Y 
Sbjct: 62   IGTDAAPRVNPDYT---RWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYA 121

Query: 266  QGKNFAHIFSLKQELSNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEH-E 325
               ++ H+  L+ +L    +G     D +  ++T++++L +          + K  +H E
Sbjct: 122  -NPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLAL----------LGKPMDHDE 181

Query: 326  LIYTYLGALDSSFEPIRAQILSSAEMPQFDDVVLKIEQEESR-RRLMNPSPAPSTDNQAF 385
             +   L  L   ++P+  QI +    P   ++  ++   ES+   + + +  P T N   
Sbjct: 182  QVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAV- 241

Query: 386  RATYNKDRGKGNLWCDHCKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGE 445
                                 SH   +                +TNN             
Sbjct: 242  ---------------------SHRNTT----------------TTNNNN----------- 301

Query: 446  LNSGTNTKADFGMNGMNPNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQ 505
             N   N + D   N  N  P Q  + +  P       + P  G        G S     Q
Sbjct: 302  -NGNRNNRYDNRNNNNNSKPWQQSSTNFHP---NNNQSKPYLGKCQICGVQGHSAKRCSQ 361

Query: 506  LMQLVNQLNQLLQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNL 565
            L   ++ +N    P           L+  S Y     +NW++DSGATHH++   NN    
Sbjct: 362  LQHFLSSVNSQQPPSPFTPWQPRANLALGSPY---SSNNWLLDSGATHHITSDFNNLSLH 421

Query: 566  ITSNEPQFVTTANGGQTKIFGTGTISVFNK--PVN--EVLYLPDFHSNLLSVNKIVKDLN 625
                    V  A+G    I  TG+ S+  K  P+N   +LY+P+ H NL+SV ++     
Sbjct: 422  QPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANG 481

Query: 626  CAVIFLPEKVIFQDIVSGEMIGEGILRNGLY----YLQQNNKCFVSSKNTDRGHLLHLRF 685
             +V F P     +D+ +G  + +G  ++ LY       Q    F S  +       H R 
Sbjct: 482  VSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARL 541

Query: 686  GHPSDQVLN--------RLFHYNYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDV 745
            GHP+  +LN         + + ++   SC  C   K  ++PF  S     +  + I+SDV
Sbjct: 542  GHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDV 601

Query: 746  WGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFR 805
            W  SP  S+++Y+YYV F+D F++ TW+Y LK K++V   F  F N + N++  ++  F 
Sbjct: 602  WS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFY 661

Query: 806  SDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKK 865
            SDNG E+V      +F QHGI H T+  HTP+ NG+SERK+RH++E    LL   ++PK 
Sbjct: 662  SDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKT 721

Query: 866  FWSDAILTATYIINRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLD 925
            +W  A   A Y+INRLP+P L   SP + L G   + D +RVFGC C+ +++   + KLD
Sbjct: 722  YWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLD 781

Query: 926  KNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVVFREH-EPF------FTPTQD----- 985
              S + +FLGYS TQ  Y C   + ++LYISR V F E+  PF       +P Q+     
Sbjct: 782  DKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRES 841

Query: 986  -------TT------------------AATP-------------------STLQFLFPSL 1045
                   TT                  AATP                   S+    FPS 
Sbjct: 842  SCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSS 901

Query: 1046 DDEENP----------------SASSSGGDYEDERNNTEDRQEEEGEDTIRRRSTRTRQP 1105
             +   P                   SS    ++   N    Q  +   T  + S+ +  P
Sbjct: 902  PEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSP 961

Query: 1106 STRLRDFVSH----QVLY----PIQNFINYN-------------------KVSPTYQIYL 1165
            +T      +      +L     P+   +N N                   K +P Y + +
Sbjct: 962  TTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAV 1021

Query: 1166 SKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKP-VGCKWVYKIK 1225
            S L   +EP T  +A +   W  AM  E+ A   N+TWD+V  P      VGC+W++  K
Sbjct: 1022 S-LAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1081

Query: 1226 YNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVK 1285
            YNSDG++ RYKARLVAKG+ Q  G+DY ETF+PV K  + RI++ VA +  W + Q+DV 
Sbjct: 1082 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1141

Query: 1286 NAFLQGDLEEEVYMTPPPGYFETSK---VCKLRKAIYGLKQSPRAWYAKLSTFLTENNFK 1345
            NAFLQG L ++VYM+ PPG+ +  +   VCKLRKA+YGLKQ+PRAWY +L  +L    F 
Sbjct: 1142 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1201

Query: 1346 KSTADCSVFIRKNGDSITIILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFL 1405
             S +D S+F+ + G SI  +LVYVDDI+I+GN+   L    + L ++F +KD  +L YFL
Sbjct: 1202 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1261

Query: 1406 GIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQR 1465
            GIE      GL LSQR+Y LDLL  T  +  KP T+PM  + KL+   G  L+  ++Y+ 
Sbjct: 1262 GIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG 1321

Query: 1466 IVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTN 1525
            IVG L YL  TRPDI++AV+ +SQFMH P   H++A+ RILRYL GTP  GI +K+ +T 
Sbjct: 1322 IVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTL 1381

Query: 1526 TVVGFSDADWAG-SCDRKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASE 1551
            ++  +SDADWAG   D  ST G+  ++G + ++W SKKQ  V RSS EAEYR++A+T+SE
Sbjct: 1382 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1441

[Close]

BLAST of IVF0020972 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 5.2e-197
Identity = 484/1522 (31.80%), Postives = 724/1522 (47.57%), Query Frame = 0


Query: 156  LNMIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDEL 215
            +NM    K+T      + NY+ W+R V     G     F++GS   P      +      
Sbjct: 18   VNMSNVTKLT------STNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVN 77

Query: 216  TAIENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQ 275
                 W   D++I S +L  +   +  A+    T+ +IW   +  Y    ++ H+  L+ 
Sbjct: 78   PDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYA-NPSYGHVTQLR- 137

Query: 276  ELSNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEH-ELIYTYLGALDSSF 335
                               +T++++L +          + K  +H E +   L  L   +
Sbjct: 138  ------------------FITRFDQLAL----------LGKPMDHDEQVERVLENLPDDY 197

Query: 336  EPIRAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSP-APSTDNQAFRATYNKDRGKGNL 395
            +P+  QI +    P   ++  ++   ES+   +N +   P T N       N +R + N 
Sbjct: 198  KPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNR 257

Query: 396  WCDHCKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGM 455
              +    +++N+ + W                                            
Sbjct: 258  GDNRNYNNNNNRSNSW-------------------------------------------- 317

Query: 456  NGMNPNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQ 515
                P+ S   +D+  P         P  G     +  G S     QL Q  +  NQ   
Sbjct: 318  ---QPSSSGSRSDNRQP--------KPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQS 377

Query: 516  PRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTAN 575
                        L+ NS Y   + +NW++DSGATHH++   NN            V  A+
Sbjct: 378  TSPFTPWQPRANLAVNSPY---NANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIAD 437

Query: 576  GGQTKIFGTGTISV----FNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQ 635
            G    I  TG+ S+     +  +N+VLY+P+ H NL+SV ++      +V F P     +
Sbjct: 438  GSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVK 497

Query: 636  DIVSGEMIGEGILRNGLY----YLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNR--- 695
            D+ +G  + +G  ++ LY       Q    F S  +       H R GHPS  +LN    
Sbjct: 498  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 557

Query: 696  -----LFHYNYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYK 755
                 + + ++   SC  C   K  ++PF  S     K  + I+SDVW  SP  S ++Y+
Sbjct: 558  NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYR 617

Query: 756  YYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFT 815
            YYV F+D F++ TW+Y LK K++V   F  F + + N++  ++    SDNG E+V     
Sbjct: 618  YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLR 677

Query: 816  NFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYII 875
            ++  QHGI H T+  HTP+ NG+SERK+RH++E    LL   +VPK +W  A   A Y+I
Sbjct: 678  DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLI 737

Query: 876  NRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIFLGYSS 935
            NRLP+P L   SP + L G+  + + ++VFGC C+ +++   + KL+  S +  F+GYS 
Sbjct: 738  NRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSL 797

Query: 936  TQKGYKCFDPEQNKLYISRDVVFREH-EPFFT-------------------PTQDTTAAT 995
            TQ  Y C      +LY SR V F E   PF T                   P+  T   T
Sbjct: 798  TQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTT 857

Query: 996  PSTL---QFLFPSLDDEENPSASSS----------------------------------- 1055
            P  L     L P LD    P +S S                                   
Sbjct: 858  PLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQP 917

Query: 1056 -GGDYEDERNNTED----------------------RQEEEGEDTIRRRSTRTRQPSTRL 1115
                ++ + +N+                         Q       I   ST   +P++  
Sbjct: 918  TAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPS 977

Query: 1116 RDFVSHQVLYPI---QNFINYNKVSP--TYQI----------------YLSKLDGNNEPN 1175
                S   L P+      I  N  +P  T+ +                Y + L  N+EP 
Sbjct: 978  SSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPR 1037

Query: 1176 TYDEAKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKP-VGCKWVYKIKYNSDGTVERY 1235
            T  +A +   W QAM  E+ A   N+TWD+V  P      VGC+W++  K+NSDG++ RY
Sbjct: 1038 TAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRY 1097

Query: 1236 KARLVAKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEE 1295
            KARLVAKG+ Q  G+DY ETF+PV K  + RI++ VA +  W + Q+DV NAFLQG L +
Sbjct: 1098 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1157

Query: 1296 EVYMTPPPGYFETSK---VCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFI 1355
            EVYM+ PPG+ +  +   VC+LRKAIYGLKQ+PRAWY +L T+L    F  S +D S+F+
Sbjct: 1158 EVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFV 1217

Query: 1356 RKNGDSITIILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKG 1415
             + G SI  +LVYVDDI+I+GN+   LK   + L ++F +K+   L YFLGIE     +G
Sbjct: 1218 LQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG 1277

Query: 1416 LFLSQRKYTLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTV 1475
            L LSQR+YTLDLL  T  L  KP  +PM T+ KL    G  L   ++Y+ IVG L YL  
Sbjct: 1278 LHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAF 1337

Query: 1476 TRPDITFAVSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADW 1535
            TRPD+++AV+ +SQ+MH P   H  A+ R+LRYL GTP  GI +K+ +T ++  +SDADW
Sbjct: 1338 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1397

Query: 1536 AGSC-DRKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHD 1551
            AG   D  ST G+  ++G + ++W SKKQ  V RSS EAEYR++A+T+SEL WI  LL +
Sbjct: 1398 AGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTE 1442

[Close]

BLAST of IVF0020972 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 3.3e-167
Identity = 427/1341 (31.84%), Postives = 677/1341 (50.48%), Query Frame = 0


Query: 272  SLKQELSNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALD 331
            +++  LS+    N+ + D    I T+ E L  Y+ +T+   ++Y + +   ++   G   
Sbjct: 62   AIRLHLSDDVVNNIIDEDTARGIWTRLESL--YMSKTLT-NKLYLKKQLYALHMSEGTNF 121

Query: 332  SSFEPIRAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKG 391
             S   +   +++     Q  ++ +KIE+E+    L+N  P+ S DN A    + K     
Sbjct: 122  LSHLNVFNGLIT-----QLANLGVKIEEEDKAILLLNSLPS-SYDNLATTILHGK----- 181

Query: 392  NLWCDHCKRSSHNKESCWVLHPHL--KPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKA 451
                        +  S  +L+  +  KP+ +G      G  R    S        +N   
Sbjct: 182  ------TTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRS--------SNNYG 241

Query: 452  DFGMNGMNPNPSQGPADH----GPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLV 511
              G  G + N S+    +      PG +      P +G           G  S Q     
Sbjct: 242  RSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKG----------KGETSGQ----K 301

Query: 512  NQLNQLLQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNE 571
            N  N     +  ++ +  +      ++L+  +S W++D+ A+HH +   + F   + + +
Sbjct: 302  NDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV-AGD 361

Query: 572  PQFVTTANGGQTKIFGTGTISVFNK-----PVNEVLYLPDFHSNLLSVNKIVKDLNCAVI 631
               V   N   +KI G G I +         + +V ++PD   NL+S   + +D      
Sbjct: 362  FGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRD-GYESY 421

Query: 632  FLPEKVIFQDIVSGEMIGEGILRNGLYYLQQNNKCFVSSKNTDRGH----LLHLRFGHPS 691
            F  +K  ++      +I +G+ R  LY  + N +      N  +      L H R GH S
Sbjct: 422  FANQK--WRLTKGSLVIAKGVARGTLY--RTNAEICQGELNAAQDEISVDLWHKRMGHMS 481

Query: 692  DQVLNRLFHYNYDSFS-------CDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSP 751
            ++ L  L   +  S++       CD C F KQ R+ F TS  +     DL++SDV GP  
Sbjct: 482  EKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPME 541

Query: 752  EESYNHYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGT 811
             ES    KY+VTFIDD S+  WVY+LKTK++VF  FQ+F   +  +   ++K  RSDNG 
Sbjct: 542  IESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGG 601

Query: 812  EYVNKEFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDA 871
            EY ++EF  +   HGI H+ T   TPQ NGV+ER NR ++EK R++L    +PK FW +A
Sbjct: 602  EYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEA 661

Query: 872  ILTATYIINRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYI--KRKDKLDKNSVK 931
            + TA Y+INR PS  L    P  +   +++   H++VFGC  F ++  +++ KLD  S+ 
Sbjct: 662  VQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIP 721

Query: 932  TIFLGYSSTQKGYKCFDPEQNKLYISRDVVFREHE----------------PFFTPTQDT 991
             IF+GY   + GY+ +DP + K+  SRDVVFRE E                P F  T  +
Sbjct: 722  CIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFV-TIPS 781

Query: 992  TAATPSTLQFLFPSLDDE-ENPSASSSGGDYEDER-NNTEDRQEEEGEDTIRRRSTRTRQ 1051
            T+  P++ +     + ++ E P      G+  DE     E   + E +    RRS R R 
Sbjct: 782  TSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRV 841

Query: 1052 PSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEA---KQQTIWIQ 1111
             S R          YP   ++               +  + EP +  E     ++   ++
Sbjct: 842  ESRR----------YPSTEYV--------------LISDDREPESLKEVLSHPEKNQLMK 901

Query: 1112 AMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYG 1171
            AM EE+++L++N T+ +VELPKGK+P+ CKWV+K+K + D  + RYKARLV KGF Q  G
Sbjct: 902  AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 961

Query: 1172 IDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFETS 1231
            ID+ E F+PV KM + R ++S+A +   ++ Q+DVK AFL GDLEEE+YM  P G+    
Sbjct: 962  IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 1021

Query: 1232 K---VCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTAD-CSVFIRKNGDSITIILVY 1291
            K   VCKL K++YGLKQ+PR WY K  +F+    + K+ +D C  F R + ++  I+L+Y
Sbjct: 1022 KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1081

Query: 1292 VDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIA--HSTKGLFLSQRKYTLD 1351
            VDD++I G +   + ++K  L + FD+KDLG     LG++I    +++ L+LSQ KY   
Sbjct: 1082 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1141

Query: 1352 LLKETGKLGTKPATSPMETNIKLN------TEDGKPLSGISQYQRIVGKLIYLTV-TRPD 1411
            +L+       KP ++P+  ++KL+      T + K       Y   VG L+Y  V TRPD
Sbjct: 1142 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1201

Query: 1412 ITFAVSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC 1471
            I  AV +VS+F+  P   H EA+  ILRYL+GT G   L    S   + G++DAD AG  
Sbjct: 1202 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGD-CLCFGGSDPILKGYTDADMAGDI 1261

Query: 1472 D-RKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIE 1531
            D RKS+TG+     G  ++W+SK Q  VA S+ EAEY A   T  E+IW+K  L ++ + 
Sbjct: 1262 DNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH 1321

Query: 1532 CSEPIQMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADI 1554
              E + ++CD+Q+A  ++ N ++H RTKHI+V  H+IR+ V  + +++  I + E  AD+
Sbjct: 1322 QKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADM 1327

[Close]

BLAST of IVF0020972 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 516.2 bits (1328), Expect = 1.3e-144
Identity = 366/1147 (31.91%), Postives = 578/1147 (50.39%), Query Frame = 0


Query: 525  KLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQTKIFGT-- 584
            +++N S+  N     +++DSGA+ H+    + + + +    P  +  A  G+  I+ T  
Sbjct: 277  EVNNTSVMDN---CGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEF-IYATKR 336

Query: 585  GTISVFNK---PVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMIGE 644
            G + + N     + +VL+  +   NL+SV ++ ++   ++ F             +  G 
Sbjct: 337  GIVRLRNDHEITLEDVLFCKEAAGNLMSVKRL-QEAGMSIEF-------------DKSGV 396

Query: 645  GILRNGLYYLQQNNKC-----------FVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNY 704
             I +NGL  ++ +               +++K+ +   L H RFGH SD  L  +   N 
Sbjct: 397  TISKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNM 456

Query: 705  DSFS------------CDTCRFAKQTRLPFP--TSITKVEKCFDLIHSDVWGPSPEESYN 764
             S              C+ C   KQ RLPF      T +++   ++HSDV GP    + +
Sbjct: 457  FSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLD 516

Query: 765  HYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNK 824
               Y+V F+D F+     YL+K K++VFS FQ+F       +N +V     DNG EY++ 
Sbjct: 517  DKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 576

Query: 825  EFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTAT 884
            E   F  + GI +  T  HTPQ NGVSER  R + EK R ++    + K FW +A+LTAT
Sbjct: 577  EMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTAT 636

Query: 885  YIINRLPSPNL--NNLSPLEILKGRKIDLDHIRVFGCTCFVYIKRKD-KLDKNSVKTIFL 944
            Y+INR+PS  L  ++ +P E+   +K  L H+RVFG T +V+IK K  K D  S K+IF+
Sbjct: 637  YLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFV 696

Query: 945  GYSSTQKGYKCFDPEQNKLYISRDVVFRE-----------HEPFFTPTQDT--------- 1004
            GY     G+K +D    K  ++RDVV  E              F   ++++         
Sbjct: 697  GYE--PNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDS 756

Query: 1005 ----------TAATPSTLQFLFPSLDDE--------------ENPSASSSGGDYEDERNN 1064
                       +     +QFL  S + E              E P+ S    + +  +++
Sbjct: 757  RKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 816

Query: 1065 TEDRQEEEGEDTIRRRSTRTRQP-------STRLRDFVSHQVLYPIQN--------FIN- 1124
             E  +    E   R+R     +         +R  +   H     I N         IN 
Sbjct: 817  KESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINR 876

Query: 1125 -YNKVSPTYQIYLSKLDG-------------NNEPNTYDEAK---QQTIWIQAMNEELKA 1184
               ++    QI  ++ D              N+ PN++DE +    ++ W +A+N EL A
Sbjct: 877  RSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNA 936

Query: 1185 LEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFA 1244
             + NNTW + + P+ K  V  +WV+ +KYN  G   RYKARLVA+GFTQ Y IDY+ETFA
Sbjct: 937  HKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFA 996

Query: 1245 PVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGY-FETSKVCKLRK 1304
            PVA++++FR ++S+   +   + QMDVK AFL G L+EE+YM  P G    +  VCKL K
Sbjct: 997  PVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNK 1056

Query: 1305 AIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNG--DSITIILVYVDDIIISGN 1364
            AIYGLKQ+ R W+      L E  F  S+ D  ++I   G  +    +L+YVDD++I+  
Sbjct: 1057 AIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATG 1116

Query: 1365 NNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTK 1424
            +  ++   K  L  KF + DL ++ +F+GI I      ++LSQ  Y   +L +       
Sbjct: 1117 DMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCN 1176

Query: 1425 PATSPMETNIK---LNTEDGKPLSGISQYQRIVGKLIYLTV-TRPDITFAVSIVSQFMHA 1484
              ++P+ + I    LN+++       +  + ++G L+Y+ + TRPD+T AV+I+S++   
Sbjct: 1177 AVSTPLPSKINYELLNSDE----DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSK 1236

Query: 1485 PRTCHMEAINRILRYLKGTPGQGILMKQNST--NTVVGFSDADWAGS-CDRKSTTGFC-T 1544
              +   + + R+LRYLKGT    ++ K+N    N ++G+ D+DWAGS  DRKSTTG+   
Sbjct: 1237 NNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFK 1296

Query: 1545 FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 1551
                NL+ W +K+QN VA SS EAEY A+     E +W+K LL  + I+   PI+++ DN
Sbjct: 1297 MFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDN 1356

[Close]

BLAST of IVF0020972 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-49
Identity = 103/224 (45.98%), Postives = 145/224 (64.73%), Query Frame = 0


Query: 1239 ILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYT 1298
            +L+YVDDI+++G++N  L  +   L   F +KDLG + YFLGI+I     GLFLSQ KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1299 LDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAV 1358
              +L   G L  KP ++P+   +  +    K     S ++ IVG L YLT+TRPDI++AV
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1359 SIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAG-SCDRKS 1418
            +IV Q MH P     + + R+LRY+KGT   G+ + +NS   V  F D+DWAG +  R+S
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1419 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIW 1462
            TTGFCTF+G N+++W +K+Q  V+RSS E EYRA+A TA+EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0020972 vs. ExPASy TrEMBL
Match: A0A5D3DP15 (Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00090 PE=4 SV=1)

HSP 1 Score: 1792.3 bits (4641), Expect = 0.0e+00
Identity = 978/1418 (68.97%), Postives = 979/1418 (69.04%), Query Frame = 0


Query: 158  MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 217
            MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA
Sbjct: 1    MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 60

Query: 218  IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 277
            IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL
Sbjct: 61   IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 120

Query: 278  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 337
            SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI
Sbjct: 121  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 180

Query: 338  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 397
            RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH
Sbjct: 181  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 240

Query: 398  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 457
            CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN
Sbjct: 241  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 300

Query: 458  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 517
            PNPSQGPADHGPPGFYGTTAAGPVQ PISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ
Sbjct: 301  PNPSQGPADHGPPGFYGTTAAGPVQDPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 360

Query: 518  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 577
            NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT
Sbjct: 361  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 420

Query: 578  KIFGTGTISVFNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMI 637
            KIFGTGTISVFNKPVNE                                   DIVSGEMI
Sbjct: 421  KIFGTGTISVFNKPVNE-----------------------------------DIVSGEMI 480

Query: 638  GEGILRNGLYYLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNYDSFSCDTCR 697
            GEGILRNGLYYLQQNNKCFVS                                       
Sbjct: 481  GEGILRNGLYYLQQNNKCFVS--------------------------------------- 540

Query: 698  FAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKT 757
                                                                        
Sbjct: 541  ------------------------------------------------------------ 600

Query: 758  KNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQ 817
                                                                        
Sbjct: 601  ------------------------------------------------------------ 660

Query: 818  NGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGR 877
                                                                        
Sbjct: 661  ------------------------------------------------------------ 720

Query: 878  KIDLDHIRVFGCTCFVYIKRKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVV 937
                                                                       +
Sbjct: 721  -----------------------------------------------------------I 780

Query: 938  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 997
            FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE
Sbjct: 781  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 840

Query: 998  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 1057
            DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE
Sbjct: 841  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 900

Query: 1058 AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 1117
            AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV
Sbjct: 901  AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 960

Query: 1118 AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 1177
            AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT
Sbjct: 961  AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 980

Query: 1178 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSIT 1237
            PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN     
Sbjct: 1021 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN----- 980

Query: 1238 IILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKY 1297
                                                                        
Sbjct: 1081 ------------------------------------------------------------ 980

Query: 1298 TLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFA 1357
                                                                        
Sbjct: 1141 ------------------------------------------------------------ 980

Query: 1358 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 1417
            VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS
Sbjct: 1201 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 980

Query: 1418 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 1477
            TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI
Sbjct: 1261 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 980

Query: 1478 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 1537
            QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL
Sbjct: 1321 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 980

Query: 1538 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 1576
            DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 1381 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 980

[Close]

BLAST of IVF0020972 vs. ExPASy TrEMBL
Match: A0A5A7SYC4 (Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00190 PE=4 SV=1)

HSP 1 Score: 1548.9 bits (4009), Expect = 0.0e+00
Identity = 876/1418 (61.78%), Postives = 876/1418 (61.78%), Query Frame = 0


Query: 158  MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 217
            MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA
Sbjct: 1    MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 60

Query: 218  IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 277
            IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL
Sbjct: 61   IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 120

Query: 278  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 337
            SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI
Sbjct: 121  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 180

Query: 338  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 397
            RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH
Sbjct: 181  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 240

Query: 398  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 457
            CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN
Sbjct: 241  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 300

Query: 458  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 517
            PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ
Sbjct: 301  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 360

Query: 518  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 577
            NS                                                          
Sbjct: 361  NS---------------------------------------------------------- 420

Query: 578  KIFGTGTISVFNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMI 637
                                                                        
Sbjct: 421  ------------------------------------------------------------ 480

Query: 638  GEGILRNGLYYLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNYDSFSCDTCR 697
                                                                        
Sbjct: 481  ------------------------------------------------------------ 540

Query: 698  FAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKT 757
                                                                        
Sbjct: 541  ------------------------------------------------------------ 600

Query: 758  KNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQ 817
                                                                        
Sbjct: 601  ------------------------------------------------------------ 660

Query: 818  NGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGR 877
                                                                        
Sbjct: 661  ------------------------------------------------------------ 720

Query: 878  KIDLDHIRVFGCTCFVYIKRKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVV 937
                                                                       V
Sbjct: 721  -----------------------------------------------------------V 780

Query: 938  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 997
            FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE
Sbjct: 781  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 840

Query: 998  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 1057
            DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE
Sbjct: 841  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 876

Query: 1058 AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 1117
            AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV
Sbjct: 901  AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 876

Query: 1118 AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 1177
            AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT
Sbjct: 961  AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 876

Query: 1178 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSIT 1237
            PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN     
Sbjct: 1021 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN----- 876

Query: 1238 IILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKY 1297
                                                                        
Sbjct: 1081 ------------------------------------------------------------ 876

Query: 1298 TLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFA 1357
                                                                        
Sbjct: 1141 ------------------------------------------------------------ 876

Query: 1358 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 1417
            VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS
Sbjct: 1201 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 876

Query: 1418 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 1477
            TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI
Sbjct: 1261 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 876

Query: 1478 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 1537
            QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL
Sbjct: 1321 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 876

Query: 1538 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 1576
            DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 1381 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 876

[Close]

BLAST of IVF0020972 vs. ExPASy TrEMBL
Match: A0A4Y1RIV4 (Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_014560 PE=4 SV=1)

HSP 1 Score: 1270.0 bits (3285), Expect = 0.0e+00
Identity = 685/1446 (47.37%), Postives = 931/1446 (64.38%), Query Frame = 0


Query: 159  IENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAI 218
            +  N+    +L    NY+PW+R+V + LGG+ K  F+NG+   P         +D     
Sbjct: 26   VNPNQRLCSVLLNEFNYLPWSRAVTLALGGRSKLGFVNGTIEAP---------EDSSPEY 85

Query: 219  ENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELS 278
            E W   DQ++MSWLL++MD K+S    + ++S  +W   K  YG   N A +F LK+ L+
Sbjct: 86   EAWLCKDQLVMSWLLNSMDPKLSEIFSFSESSLSLWKAVKDMYGNQNNAARVFQLKRNLA 145

Query: 279  NIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIR 338
            +++QG+ +    +  +   W EL MY P TI+   + KR+E + I+  L +L S +E +R
Sbjct: 146  SLQQGDKSFVHHLGCMKNMWNELDMYRPHTIDAAILLKRSEEDKIFHLLASLGSEYEDLR 205

Query: 339  AQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRG-------KG 398
            + IL + E+P F  V   I++EE RR++MN     S        T +K  G       + 
Sbjct: 206  SHILMNPELPSFASVCTTIQREEVRRKVMNVDIKSSVSEARAFVTNHKSSGDRVYKGKRP 265

Query: 399  NLWCDHCKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADF 458
            +L C HC    H  + CW+LHP LKP+ +   S +  G +  +H+   + ++   T  D 
Sbjct: 266  DLKCLHCNNIGHLIDRCWILHPELKPKFENKPSRDYKGSQTRSHT--NKNHAAAATSID- 325

Query: 459  GMNGMNPNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQL 518
            G+     NP+    +        +      +G  S V   G       Q    + + N++
Sbjct: 326  GLMNFTANPADLINEF-------SAYLHTKKGSTSEVLTGGNQTALLGQFAGFLAESNRV 385

Query: 519  LQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTT 578
              P+    G+    LS      + HD  WIIDSGAT HM+   +   N  +   P  V+ 
Sbjct: 386  --PQGDVPGIM-CALSTALNVSHSHDF-WIIDSGATDHMTNQYSKLYNFESYTTPSLVSI 445

Query: 579  ANGGQTKIFGTGTISVFNKPV-NEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQD 638
            ANG    + G G + + +  V +  LY+P F   LLSV +I   LNC  IF P  V+FQD
Sbjct: 446  ANGRGVPVLGRGKVKLISDSVESTALYVPSFPFQLLSVGRITNSLNCRAIFSPHNVVFQD 505

Query: 639  IVSGEMIGEGILRNGLYYLQQN---NKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLF-HY 698
            + + ++IGEG   NGLYY  +N    K F  S N +   L H R  HPS+ VL+ LF   
Sbjct: 506  LATKKLIGEGHYLNGLYYFSKNLNVPKGFQVSSNLEH-QLWHQRLAHPSEFVLSTLFPSL 565

Query: 699  NYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDF 758
               S  C+ C  +K TRLPF +SI++  K F+++HSDVWGP+P ES++ Y+YYVTF+DDF
Sbjct: 566  CKSSLVCEICHLSKFTRLPFNSSISRASKLFEIVHSDVWGPAPLESFDGYRYYVTFVDDF 625

Query: 759  SKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGIL 818
            S+ TW+YLLK K+EV   F+ F N + N +++Q+ I RSDNGTEY +K  TN+   HGI+
Sbjct: 626  SRVTWLYLLKFKSEVMDAFKNFHNLVMNHFSSQIHILRSDNGTEYTSKNMTNYLSTHGII 685

Query: 819  HQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLN 878
            HQT+C  TPQQNG++ERKNR LLEKTRAL+LQ NVPK+FWS  +L ATY+INRLPS  L+
Sbjct: 686  HQTSCVGTPQQNGIAERKNRDLLEKTRALMLQMNVPKRFWSQGVLAATYLINRLPSRVLD 745

Query: 879  NLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIFLGYSSTQKGYKCFD 938
            + SP E+++ +KI+L H+R+FGCTC+ +I+   +DKLD  ++K +F+GYSSTQKGYKC++
Sbjct: 746  SKSPYEVMQNKKINLSHLRIFGCTCYAHIQSHHRDKLDPKAIKCVFMGYSSTQKGYKCYN 805

Query: 939  PEQNKLYISRDVVFREHEPFFTPTQDTTAATPSTLQFLFPSLDDEEN-------PSASSS 998
            P   KL++SRDV F E +P+F    D        L F FP  +  E        P  S S
Sbjct: 806  PCSRKLFVSRDVRFDEIKPYFNKPSDQNRQGEHLLDF-FPLPNPVETSDCVHSVPHNSDS 865

Query: 999  ----------GGDYEDER-------NNTEDRQEEEGEDTI-----RRRSTRTRQPSTRLR 1058
                      G + E          N+T   +E   E T+     RR  TR R P +RL+
Sbjct: 866  HATNIDNVIIGDETEASEAQVVPHDNDTSSIEESGAEPTVIPSQPRRNPTRDRHPPSRLQ 925

Query: 1059 DFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKAL 1118
            D+V+  V YPI  F+NY+KVS ++  +LSKL   +EP  + EA  Q +W  AM EELKAL
Sbjct: 926  DYVTFNVRYPIHKFVNYSKVSHSHAAFLSKLSNESEPRNFQEANLQDVWRLAMEEELKAL 985

Query: 1119 EQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAP 1178
            ++N TW +V+LPKGKK VG +W+YK K+NSDG++ER+KARLVA+GFTQT+G+DY+ETFAP
Sbjct: 986  DENKTWSVVQLPKGKKVVGSRWIYKTKFNSDGSIERHKARLVARGFTQTFGVDYKETFAP 1045

Query: 1179 VAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFE---TSKVCKLR 1238
            VAKM+T R+L+SVA NH W L+QMDVKNAFL GDLEEEVYM  PPG+ +   +S VCKL 
Sbjct: 1046 VAKMSTVRVLLSVAVNHEWPLYQMDVKNAFLHGDLEEEVYMQLPPGHPQAQNSSMVCKLH 1105

Query: 1239 KAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNN 1298
            K+IYGLKQSPRAWYAKLS+ L +  FK+S AD S+F+R       ++L+YVDDIII+G+N
Sbjct: 1106 KSIYGLKQSPRAWYAKLSSVLEKFGFKRSHADSSLFVRTGSVGKLVVLIYVDDIIITGDN 1165

Query: 1299 NQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKP 1358
              ++  +K  L +KF IKDLG L YFLGIE+A S KGLFLSQRKY +DLL+E   +  KP
Sbjct: 1166 IDEINTLKHSLHQKFAIKDLGVLKYFLGIEMATSPKGLFLSQRKYVIDLLQEVKMIDCKP 1225

Query: 1359 ATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCH 1418
            A +P+++ +KL+ E G+PLS IS YQR+VGKLIYLT+TRPDIT+AVS+VSQFMHAP   H
Sbjct: 1226 ARTPLDSKLKLDLE-GEPLSNISYYQRLVGKLIYLTITRPDITYAVSLVSQFMHAPTEAH 1285

Query: 1419 MEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVGGNLVT 1478
            +  + RILRYLKG+ G+GI+MK N    ++ ++DADWAG+  DRKSTTG+CTFVGGN+VT
Sbjct: 1286 LNVVKRILRYLKGSIGRGIIMKNNGHTQIMAYTDADWAGNAIDRKSTTGYCTFVGGNIVT 1345

Query: 1479 WKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIAS 1538
            WKSKKQNV+ARSSAEAEYRAMASTA ELIW+K L+ D+    ++P+ +FCDNQAA HIAS
Sbjct: 1346 WKSKKQNVIARSSAEAEYRAMASTACELIWLKSLISDLGFLSNKPMSLFCDNQAAMHIAS 1405

Query: 1539 NPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGA 1558
            NPVFHERTKHIEVDCH++R++VQSK I+  F RS +QLAD+FTK+L     Q++LSKLG+
Sbjct: 1406 NPVFHERTKHIEVDCHYVREQVQSKVIQTTFTRSHDQLADVFTKSLASTQFQRLLSKLGS 1445

[Close]

BLAST of IVF0020972 vs. ExPASy TrEMBL
Match: A0A5H2XGM8 (Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_120S000500 PE=4 SV=1)

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 683/1446 (47.23%), Postives = 931/1446 (64.38%), Query Frame = 0


Query: 159  IENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAI 218
            +  N+    +L    NY+PW+R+V + LGG+ K  F+NG+   P         +D     
Sbjct: 26   VNPNQRLCSVLLNEFNYLPWSRAVTLALGGRSKLGFVNGTIEAP---------EDSSPEY 85

Query: 219  ENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELS 278
            E W   DQ++MSWLL++MD K+S    + ++S  +W   K  YG   N A +F LK+ L+
Sbjct: 86   EAWLCKDQLVMSWLLNSMDPKLSEIFSFSESSLSLWKAVKDMYGNQNNAARVFQLKRNLA 145

Query: 279  NIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIR 338
            +++QG+ +    +  +   W EL MY P TI+   + KR+E + I+  L +L S +E +R
Sbjct: 146  SLQQGDKSFVHHLGCMKNMWNELDMYRPHTIDAAILLKRSEEDKIFHLLASLGSEYEDLR 205

Query: 339  AQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRG-------KG 398
            + IL + E+P F  V   I++EE RR++MN     S        T +K  G       + 
Sbjct: 206  SHILMNPELPSFASVCTTIQREEVRRKVMNVDIKSSVSEARAFVTNHKSSGDRVYKGKRP 265

Query: 399  NLWCDHCKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADF 458
            +L C HC    H  + CW+LHP LKP+ +   S +  G +  +H+   + ++   T  D 
Sbjct: 266  DLKCLHCNNIGHLIDRCWILHPELKPKFENKPSRDYKGSQTRSHT--NKNHAAAATSID- 325

Query: 459  GMNGMNPNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQL 518
            G+     NP+    +        +      +G  S V   G       Q    + + N++
Sbjct: 326  GLMNFTANPADLINEF-------SAYLHTKKGSTSEVLTGGNQTALLGQFAGFLAESNRV 385

Query: 519  LQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTT 578
              P+    G+    LS      + HD  WIIDSGAT HM+   +   N  +   P  V+ 
Sbjct: 386  --PQGDVPGIM-CALSTALNVSHSHDF-WIIDSGATDHMTNQYSKLYNFESYTTPSLVSI 445

Query: 579  ANGGQTKIFGTGTISVFNKPV-NEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQD 638
            ANG    + G G + + +  V +  LY+P F   LLSV +I   LNC  IF P  V+FQD
Sbjct: 446  ANGRGVPVLGRGKVKLISDSVESTALYVPSFPFQLLSVGRITNSLNCRAIFSPHNVVFQD 505

Query: 639  IVSGEMIGEGILRNGLYYLQQN---NKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLF-HY 698
            + + ++IGEG   NGLYY  +N    K F  S N +   L H R  HPS+ VL+ LF   
Sbjct: 506  LATKKLIGEGHYLNGLYYFSKNLNVPKGFQVSSNLEH-QLWHQRLAHPSEFVLSTLFPSL 565

Query: 699  NYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDF 758
               S  C+ C  +K TRLPF +SI++  K F+++HSDVWGP+P ES++ Y+YYVTF+DDF
Sbjct: 566  CKSSLVCEICHLSKFTRLPFNSSISRASKLFEIVHSDVWGPAPLESFDGYRYYVTFVDDF 625

Query: 759  SKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGIL 818
            S+ TW+YLLK K+EV   F+ F N + N +++Q+ I RSDNGTEY +K  TN+   HGI+
Sbjct: 626  SRVTWLYLLKFKSEVMDAFKNFHNLVMNHFSSQIHILRSDNGTEYTSKNMTNYLSTHGII 685

Query: 819  HQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLN 878
            HQT+C  TPQQNG++ERKNR LLEKTRAL+LQ NVPK+FWS  +L ATY+INRLPS  L+
Sbjct: 686  HQTSCVGTPQQNGIAERKNRDLLEKTRALMLQMNVPKRFWSQGVLAATYLINRLPSRVLD 745

Query: 879  NLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIFLGYSSTQKGYKCFD 938
            + SP E+++ +KI+L H+R+FGCTC+ +I+   +DKLD  ++K +F+GYSSTQKGYKC++
Sbjct: 746  SKSPYEVMQNKKINLSHLRIFGCTCYAHIQSHHRDKLDPKAIKCVFMGYSSTQKGYKCYN 805

Query: 939  PEQNKLYISRDVVFREHEPFFTPTQDTTAATPSTLQFLFPSLDDEEN-------PSASSS 998
            P   KL++SRDV F E +P+F    D        L F FP  +  E        P  S S
Sbjct: 806  PCSRKLFVSRDVRFDEIKPYFNKPSDQNRQGEHLLDF-FPLPNPVETSDCVHSVPHNSDS 865

Query: 999  ----------GGDYEDER-------NNTEDRQEEEGEDTI-----RRRSTRTRQPSTRLR 1058
                      G + E          N+T   +E   E T+     RR  TR R P +RL+
Sbjct: 866  HATNIDNVIIGDETEASEAQVVPHDNDTSSIEESGAEPTVIPSQPRRNPTRDRHPPSRLQ 925

Query: 1059 DFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKAL 1118
            D+V+  V YPI  F+NY+KVS ++  +LSKL   +EP  + EA  Q +W  AM EELKAL
Sbjct: 926  DYVTFNVRYPIHKFVNYSKVSHSHAAFLSKLSNESEPRNFQEANLQDVWRLAMEEELKAL 985

Query: 1119 EQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAP 1178
            ++N TW +V+LPKGKK VG +W+YK K+NSDG++ER+KARLVA+GFTQT+G+DY+ETFAP
Sbjct: 986  DENKTWSVVQLPKGKKVVGSRWIYKTKFNSDGSIERHKARLVARGFTQTFGVDYKETFAP 1045

Query: 1179 VAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFE---TSKVCKLR 1238
            VAKM+T R+L+SVA NH W L+QMDVKNAFL GDLEEEVYM  PPG+ +   +S VCKL 
Sbjct: 1046 VAKMSTVRVLLSVAVNHEWPLYQMDVKNAFLHGDLEEEVYMQLPPGHPQAQNSSMVCKLH 1105

Query: 1239 KAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNN 1298
            K+IYGLKQSPRAWYAKLS+ L +  FK+S AD S+F+R       ++L+YVDDIII+G+N
Sbjct: 1106 KSIYGLKQSPRAWYAKLSSVLEKFGFKRSHADSSLFVRTGSVGKLVVLIYVDDIIITGDN 1165

Query: 1299 NQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKP 1358
              ++  +K  L +KF IKDLG L YFLGIE+A S KGLFLSQRKY +DLL+E   +  KP
Sbjct: 1166 IDEINTLKHSLHQKFAIKDLGVLKYFLGIEMATSPKGLFLSQRKYVIDLLQEVKMIDCKP 1225

Query: 1359 ATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCH 1418
            A +P+++ +KL+ E G+PLS IS YQR+VGKLIYLT+TRPDIT+AVS+VSQFMHAP   H
Sbjct: 1226 ARTPLDSKLKLDLE-GEPLSNISYYQRLVGKLIYLTITRPDITYAVSLVSQFMHAPTEAH 1285

Query: 1419 MEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVGGNLVT 1478
            +  + RILRYLKG+ G+GI+MK N    ++ ++DADWAG+  DRKSTTG+CTFVGGN+VT
Sbjct: 1286 LNVVKRILRYLKGSIGRGIIMKNNGHTQIMAYTDADWAGNAIDRKSTTGYCTFVGGNIVT 1345

Query: 1479 WKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIAS 1538
            WKSK+QNV+ARSSAEAEYRA+ASTA ELIW+K L+ D+    ++P+ +FCDNQAA HIAS
Sbjct: 1346 WKSKRQNVIARSSAEAEYRAVASTACELIWLKSLISDLGFLSNKPMSLFCDNQAAMHIAS 1405

Query: 1539 NPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGA 1558
            NPVFHERTKHIEVDCH++R++VQSK I+  F RS +QLAD+FTK+L     Q++LSKLG+
Sbjct: 1406 NPVFHERTKHIEVDCHYVREQVQSKVIQTTFTRSHDQLADVFTKSLASTQFQRLLSKLGS 1445

[Close]

BLAST of IVF0020972 vs. ExPASy TrEMBL
Match: A0A2P6S1E1 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0156071 PE=4 SV=1)

HSP 1 Score: 1185.6 bits (3066), Expect = 0.0e+00
Identity = 647/1405 (46.05%), Postives = 893/1405 (63.56%), Query Frame = 0


Query: 168  ILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAIENWETTDQM 227
            +L    NY+PW+R++ + LGG+ K +FING    P         D   +  E+W + DQ+
Sbjct: 26   VLLNEFNYLPWSRAITLALGGRSKLNFINGKNNIP---------DASSSEYESWLSKDQL 85

Query: 228  IMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELSNIKQGNLNN 287
            +MSWL+++M+ K++    Y ++S+ +W   K  YG   N A +F LK++L+ I+QGNL+ 
Sbjct: 86   VMSWLINSMEPKLAEIFSYSESSQHLWDAVKDMYGNLNNAARVFQLKKDLAGIQQGNLSF 145

Query: 288  SDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIRAQILSSAEM 347
               +  +  KW EL  Y P TI+   + KR E + ++  L +L S +E +++ +L S E+
Sbjct: 146  VQHLGNLKAKWNELDTYRPHTIDATILLKRAEEDKVFQLLASLGSEYEDLKSHLLISPEL 205

Query: 348  PQFDDVVLKIEQEESRRRLMN-PSPAPSTDNQAFRA--TYNKDR----GKGNLWCDHCKR 407
            P F  V   I+  E R+R+MN  + A  ++ +AF A  +   DR     + +L C HC+R
Sbjct: 206  PSFTTVCNSIQLGEVRKRVMNVDASAERSEARAFVANKSVTSDRTYKGKRPDLKCTHCER 265

Query: 408  -----SSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFG--- 467
                   H +E CW+LHP LKP+         G  ++ ++         +N KA+F    
Sbjct: 266  IGRTGIGHTRERCWILHPELKPKFNEDQKNQRGTIQKSSYI--------SNPKANFSNIS 325

Query: 468  --MNGMNPNP----------SQGPADHGPPGFYGTTAA--GPVQGPISFVTPAGPSGPNS 527
              M     NP           Q   D       G+T A  G   G +     A  +  +S
Sbjct: 326  EDMMNFTSNPITLINEFATYLQKKQDSLESNENGSTTAMLGKFAGFL-----AKSNMASS 385

Query: 528  DQLMQLVNQLNQLLQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFL 587
            + +  ++  ++  L                    ++K+   WI+DSGA+ HM+ +     
Sbjct: 386  EDIPGIICAISTALD-------------------VSKNHDFWIVDSGASDHMTNNSFILH 445

Query: 588  NLITSNEPQFVTTANGGQTKIFGTGTISVFNKPVNE-VLYLPDFHSNLLSVNKIVKDLNC 647
            +  T ++P  V+ ANG    I G G + +F+  V    L++P F   LLSV +++  L+C
Sbjct: 446  DFETLSKPSHVSIANGNDVPILGKGKLKLFSDSVESFALFVPSFPFQLLSVGRLMNSLDC 505

Query: 648  AVIFLPEKVIFQDIVSGEMIGEGILRNGLYYLQQN---NKCFVS-SKNTDRGHLLHLRFG 707
              IF P  V+FQD VS + IGEG   NGLYY+  +   +KCF++ SK+  +  L H R  
Sbjct: 506  LAIFSPYNVVFQDRVSKKKIGEGFFLNGLYYISTSSSFSKCFLTESKSATQQQLWHKRLA 565

Query: 708  HPSDQVLNRLF-HYNYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEES 767
            HPS  VL+ LF  +   S  C+TC  +K TRLPF  S ++  + F+++HSDVWGP+  ES
Sbjct: 566  HPSFHVLSILFPSFCKVSHECETCHMSKFTRLPFQISQSRTTQPFEIVHSDVWGPASLES 625

Query: 768  YNHYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYV 827
            ++ Y++YVTFIDDF++TT+VYLLK K+EVF CFQ+F N + N +++++ I RSDNGTEY 
Sbjct: 626  FDGYRFYVTFIDDFTRTTFVYLLKFKSEVFKCFQDFHNLVKNHFSSKICILRSDNGTEYT 685

Query: 828  NKEFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILT 887
            +K  T++    GI+H T+C  TPQQNG++ERKNR LLEK RAL+LQ NVPKKFWS  I T
Sbjct: 686  SKIMTDYLSAQGIIHHTSCVGTPQQNGIAERKNRDLLEKARALMLQTNVPKKFWSQGIQT 745

Query: 888  ATYIINRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIF 947
            A YIINRLPS  LN  SP E+LKGRK+D+ H+RVFGCTCFV+++   +DK D  ++K +F
Sbjct: 746  AAYIINRLPSSVLNFRSPFEVLKGRKVDITHLRVFGCTCFVHVQSNHRDKFDPRAIKCVF 805

Query: 948  LGYSSTQKGYKCFDPEQNKLYISRDVVFREHEPFF-----------------TPTQ-DTT 1007
            LGYSSTQKGYKC++ +  K ++SRDV F E + FF                 TP   +  
Sbjct: 806  LGYSSTQKGYKCYNSQTRKFFVSRDVRFDESDSFFQLSDNEPQGEHICDLFPTPIPVEAA 865

Query: 1008 AATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGEDT--IRRRSTRTRQP 1067
              TPS+ Q +   +D EE  + S           NT+D Q E   +T   RR   R R  
Sbjct: 866  VDTPSSQQPVQQIVDTEEVQADS-----------NTQDHQPEVVPNTPQPRRNPPRGRHL 925

Query: 1068 STRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNE 1127
              R +++ ++   YP+    +Y   S  +  +L K+    EP  ++EA Q  +W +AM++
Sbjct: 926  PARFQEYETYTPRYPLAQVAHYTSTSSPHSAFLIKISKETEPRNFEEANQSPVWKKAMDD 985

Query: 1128 ELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQ 1187
            ELKAL+ N TW +V+LPKG+K VG +W+YKIK+NSDG++ER+KARLVA+GFTQT+G+DY+
Sbjct: 986  ELKALDDNRTWSIVKLPKGQKIVGARWIYKIKFNSDGSIERHKARLVARGFTQTFGVDYK 1045

Query: 1188 ETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGY---FETSK 1247
            ETFAPVAKMNT R+L+SVA N GW L+QMDVKNAFL GDLEE+VYM  PPG+    E   
Sbjct: 1046 ETFAPVAKMNTVRVLLSVAVNCGWSLYQMDVKNAFLHGDLEEDVYMRLPPGHPRESEAGM 1105

Query: 1248 VCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDII 1307
            VCKL KA+YGLKQSPRAWY+KLS+ L  ++FK+S AD S+FIR       ++LVYVDD+I
Sbjct: 1106 VCKLHKALYGLKQSPRAWYSKLSSVLLASSFKRSHADSSLFIRNGKAGKLVVLVYVDDLI 1165

Query: 1308 ISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGK 1367
            I+G+N  ++K +K  L   F IKDLG L YFLGIE+ HS+ G+FL+QRKY +DLL E G 
Sbjct: 1166 ITGDNMDEIKSLKSALHNTFAIKDLGPLKYFLGIEMDHSSNGIFLNQRKYVVDLLDEAGM 1225

Query: 1368 LGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHA 1427
              +KPA +P+ + +K++ E G+PLS I  YQR+VGKLIYLT+TRPD+T+AVS+VSQFMH+
Sbjct: 1226 KDSKPAHTPLSSRLKIDIE-GEPLSDICVYQRLVGKLIYLTITRPDLTYAVSLVSQFMHS 1285

Query: 1428 PRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVG 1487
            P T H++ + RILRYLKGT  +GI+MK N    +VG+SD+DWAG+  DRKSTTG+CTF+G
Sbjct: 1286 PTTHHLQIVKRILRYLKGTVDRGIVMKNNGHFNLVGYSDSDWAGNAIDRKSTTGYCTFIG 1345

Query: 1488 GNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAA 1512
            GNLVTWKSKKQ VVA SSAEAEYRAMASTA ELIW+K LL D+ I C+ PI + CDNQAA
Sbjct: 1346 GNLVTWKSKKQTVVACSSAEAEYRAMASTACELIWLKTLLGDLGIVCTLPICLHCDNQAA 1377

[Close]

BLAST of IVF0020972 vs. NCBI nr
Match: TYK00722.1 (copia-like protein [Cucumis melo var. makuwa] >TYK25285.1 copia-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1788 bits (4632), Expect = 0.0
Identity = 978/1418 (68.97%), Postives = 979/1418 (69.04%), Query Frame = 0


Query: 158  MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 217
            MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA
Sbjct: 1    MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 60

Query: 218  IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 277
            IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL
Sbjct: 61   IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 120

Query: 278  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 337
            SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI
Sbjct: 121  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 180

Query: 338  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 397
            RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH
Sbjct: 181  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 240

Query: 398  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 457
            CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN
Sbjct: 241  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 300

Query: 458  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 517
            PNPSQGPADHGPPGFYGTTAAGPVQ PISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ
Sbjct: 301  PNPSQGPADHGPPGFYGTTAAGPVQDPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 360

Query: 518  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 577
            NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT
Sbjct: 361  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 420

Query: 578  KIFGTGTISVFNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMI 637
            KIFGTGTISVFNKPVNE                                   DIVSGEMI
Sbjct: 421  KIFGTGTISVFNKPVNE-----------------------------------DIVSGEMI 480

Query: 638  GEGILRNGLYYLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNYDSFSCDTCR 697
            GEGILRNGLYYLQQNNKCFVS                                       
Sbjct: 481  GEGILRNGLYYLQQNNKCFVS--------------------------------------- 540

Query: 698  FAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKT 757
                                                                        
Sbjct: 541  ------------------------------------------------------------ 600

Query: 758  KNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQ 817
                                                                        
Sbjct: 601  ------------------------------------------------------------ 660

Query: 818  NGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGR 877
                                                                        
Sbjct: 661  ------------------------------------------------------------ 720

Query: 878  KIDLDHIRVFGCTCFVYIKRKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVV 937
                                                                       +
Sbjct: 721  -----------------------------------------------------------I 780

Query: 938  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 997
            FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE
Sbjct: 781  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 840

Query: 998  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 1057
            DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE
Sbjct: 841  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 900

Query: 1058 AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 1117
            AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV
Sbjct: 901  AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 960

Query: 1118 AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 1177
            AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT
Sbjct: 961  AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 980

Query: 1178 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSIT 1237
            PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN     
Sbjct: 1021 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN----- 980

Query: 1238 IILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKY 1297
                                                                        
Sbjct: 1081 ------------------------------------------------------------ 980

Query: 1298 TLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFA 1357
                                                                        
Sbjct: 1141 ------------------------------------------------------------ 980

Query: 1358 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 1417
            VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS
Sbjct: 1201 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 980

Query: 1418 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 1477
            TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI
Sbjct: 1261 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 980

Query: 1478 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 1537
            QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL
Sbjct: 1321 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 980

Query: 1538 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 1575
            DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 1381 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 980

[Close]

BLAST of IVF0020972 vs. NCBI nr
Match: KAA0036222.1 (copia-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1546 bits (4003), Expect = 0.0
Identity = 876/1418 (61.78%), Postives = 876/1418 (61.78%), Query Frame = 0


Query: 158  MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 217
            MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA
Sbjct: 1    MIENNKITTYILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTA 60

Query: 218  IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 277
            IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL
Sbjct: 61   IENWETTDQMIMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQEL 120

Query: 278  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 337
            SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI
Sbjct: 121  SNIKQGNLNNSDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPI 180

Query: 338  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 397
            RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH
Sbjct: 181  RAQILSSAEMPQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRGKGNLWCDH 240

Query: 398  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 457
            CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN
Sbjct: 241  CKRSSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMN 300

Query: 458  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 517
            PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ
Sbjct: 301  PNPSQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQ 360

Query: 518  NSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQT 577
            NS                                                          
Sbjct: 361  NS---------------------------------------------------------- 420

Query: 578  KIFGTGTISVFNKPVNEVLYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMI 637
                                                                        
Sbjct: 421  ------------------------------------------------------------ 480

Query: 638  GEGILRNGLYYLQQNNKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLFHYNYDSFSCDTCR 697
                                                                        
Sbjct: 481  ------------------------------------------------------------ 540

Query: 698  FAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLLKT 757
                                                                        
Sbjct: 541  ------------------------------------------------------------ 600

Query: 758  KNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTPQQ 817
                                                                        
Sbjct: 601  ------------------------------------------------------------ 660

Query: 818  NGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGR 877
                                                                        
Sbjct: 661  ------------------------------------------------------------ 720

Query: 878  KIDLDHIRVFGCTCFVYIKRKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYISRDVV 937
                                                                       V
Sbjct: 721  -----------------------------------------------------------V 780

Query: 938  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 997
            FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE
Sbjct: 781  FREHEPFFTPTQDTTAATPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGE 840

Query: 998  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 1057
            DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE
Sbjct: 841  DTIRRRSTRTRQPSTRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDE 876

Query: 1058 AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 1117
            AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV
Sbjct: 901  AKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLV 876

Query: 1118 AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 1177
            AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT
Sbjct: 961  AKGFTQTYGIDYQETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMT 876

Query: 1178 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSIT 1237
            PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN     
Sbjct: 1021 PPPGYFETSKVCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKN----- 876

Query: 1238 IILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKY 1297
                                                                        
Sbjct: 1081 ------------------------------------------------------------ 876

Query: 1298 TLDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFA 1357
                                                                        
Sbjct: 1141 ------------------------------------------------------------ 876

Query: 1358 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 1417
            VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS
Sbjct: 1201 VSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKS 876

Query: 1418 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 1477
            TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI
Sbjct: 1261 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPI 876

Query: 1478 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 1537
            QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL
Sbjct: 1321 QMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKAL 876

Query: 1538 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 1575
            DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 1381 DKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS 876

[Close]

BLAST of IVF0020972 vs. NCBI nr
Match: BBH03633.1 (Seven transmembrane MLO family protein [Prunus dulcis])

HSP 1 Score: 1263 bits (3269), Expect = 0.0
Identity = 687/1437 (47.81%), Postives = 927/1437 (64.51%), Query Frame = 0


Query: 168  ILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAIENWETTDQM 227
            +L    NY+PW+R+V + LGG+ K  F+NG+   P         +D     E W   DQ+
Sbjct: 35   VLLNEFNYLPWSRAVTLALGGRSKLGFVNGTIEAP---------EDSSPEYEAWLCKDQL 94

Query: 228  IMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELSNIKQGNLNN 287
            +MSWLL++MD K+S    + ++S  +W   K  YG   N A +F LK+ L++++QG+ + 
Sbjct: 95   VMSWLLNSMDPKLSEIFSFSESSLSLWKAVKDMYGNQNNAARVFQLKRNLASLQQGDKSF 154

Query: 288  SDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIRAQILSSAEM 347
               +  +   W EL MY P TI+   + KR+E + I+  L +L S +E +R+ IL + E+
Sbjct: 155  VHHLGCMKNMWNELDMYRPHTIDAAILLKRSEEDKIFHLLASLGSEYEDLRSHILMNPEL 214

Query: 348  PQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRG----KG---NLWCDHCKR 407
            P F  V   I++EE RR++MN     S        T +K  G    KG   +L C HC  
Sbjct: 215  PSFASVCTTIQREEVRRKVMNVDIKSSVSEARAFVTNHKSSGDRVYKGKRPDLKCLHCNN 274

Query: 408  SSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMNPNP 467
              H  + CW+LHP LKP+ +   S +  G +  +H+      + T+     G+     NP
Sbjct: 275  IGHLIDRCWILHPELKPKFENKPSRDYKGSQTRSHTNKNHAAAATSID---GLMNFTANP 334

Query: 468  SQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQNSG 527
            +    +      Y  T     +G  S V   G       Q    + + N++  P+    G
Sbjct: 335  ADLINEFS---AYLHTK----KGSTSEVLTGGNQTALLGQFAGFLAESNRV--PQGDVPG 394

Query: 528  LSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQTKIF 587
            +    LS      + HD  WIIDSGAT HM+   +   N  +   P  V+ ANG    + 
Sbjct: 395  IM-CALSTALNVSHSHDF-WIIDSGATDHMTNQYSKLYNFESYTTPSLVSIANGRGVPVL 454

Query: 588  GTGTISVFNKPVNEV-LYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMIGE 647
            G G + + +  V    LY+P F   LLSV +I   LNC  IF P  V+FQD+ + ++IGE
Sbjct: 455  GRGKVKLISDSVESTALYVPSFPFQLLSVGRITNSLNCRAIFSPHNVVFQDLATKKLIGE 514

Query: 648  GILRNGLYYLQQN---NKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLF-HYNYDSFSCDT 707
            G   NGLYY  +N    K F  S N +   L H R  HPS+ VL+ LF      S  C+ 
Sbjct: 515  GHYLNGLYYFSKNLNVPKGFQVSSNLEH-QLWHQRLAHPSEFVLSTLFPSLCKSSLVCEI 574

Query: 708  CRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLL 767
            C  +K TRLPF +SI++  K F+++HSDVWGP+P ES++ Y+YYVTF+DDFS+ TW+YLL
Sbjct: 575  CHLSKFTRLPFNSSISRASKLFEIVHSDVWGPAPLESFDGYRYYVTFVDDFSRVTWLYLL 634

Query: 768  KTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTP 827
            K K+EV   F+ F N + N +++Q+ I RSDNGTEY +K  TN+   HGI+HQT+C  TP
Sbjct: 635  KFKSEVMDAFKNFHNLVMNHFSSQIHILRSDNGTEYTSKNMTNYLSTHGIIHQTSCVGTP 694

Query: 828  QQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILK 887
            QQNG++ERKNR LLEKTRAL+LQ NVPK+FWS  +L ATY+INRLPS  L++ SP E+++
Sbjct: 695  QQNGIAERKNRDLLEKTRALMLQMNVPKRFWSQGVLAATYLINRLPSRVLDSKSPYEVMQ 754

Query: 888  GRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYIS 947
             +KI+L H+R+FGCTC+ +I+   +DKLD  ++K +F+GYSSTQKGYKC++P   KL++S
Sbjct: 755  NKKINLSHLRIFGCTCYAHIQSHHRDKLDPKAIKCVFMGYSSTQKGYKCYNPCSRKLFVS 814

Query: 948  RDVVFREHEPFFTPTQDTTAATPSTLQFLFPSLDDEEN-------PSASSS--------- 1007
            RDV F E +P+F    D        L F FP  +  E        P  S S         
Sbjct: 815  RDVRFDEIKPYFNKPSDQNRQGEHLLDF-FPLPNPVETSDCVHSVPHNSDSHATNIDNVI 874

Query: 1008 -GGDYEDER-------NNTEDRQEEEGEDTI-----RRRSTRTRQPSTRLRDFVSHQVLY 1067
             G + E          N+T   +E   E T+     RR  TR R P +RL+D+V+  V Y
Sbjct: 875  IGDETEASEAQVVPHDNDTSSIEESGAEPTVIPSQPRRNPTRDRHPPSRLQDYVTFNVRY 934

Query: 1068 PIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMV 1127
            PI  F+NY+KVS ++  +LSKL   +EP  + EA  Q +W  AM EELKAL++N TW +V
Sbjct: 935  PIHKFVNYSKVSHSHAAFLSKLSNESEPRNFQEANLQDVWRLAMEEELKALDENKTWSVV 994

Query: 1128 ELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRI 1187
            +LPKGKK VG +W+YK K+NSDG++ER+KARLVA+GFTQT+G+DY+ETFAPVAKM+T R+
Sbjct: 995  QLPKGKKVVGSRWIYKTKFNSDGSIERHKARLVARGFTQTFGVDYKETFAPVAKMSTVRV 1054

Query: 1188 LMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFE---TSKVCKLRKAIYGLKQS 1247
            L+SVA NH W L+QMDVKNAFL GDLEEEVYM  PPG+ +   +S VCKL K+IYGLKQS
Sbjct: 1055 LLSVAVNHEWPLYQMDVKNAFLHGDLEEEVYMQLPPGHPQAQNSSMVCKLHKSIYGLKQS 1114

Query: 1248 PRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNNNQKLKEVKE 1307
            PRAWYAKLS+ L +  FK+S AD S+F+R       ++L+YVDDIII+G+N  ++  +K 
Sbjct: 1115 PRAWYAKLSSVLEKFGFKRSHADSSLFVRTGSVGKLVVLIYVDDIIITGDNIDEINTLKH 1174

Query: 1308 MLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKPATSPMETNI 1367
             L +KF IKDLG L YFLGIE+A S KGLFLSQRKY +DLL+E   +  KPA +P+++ +
Sbjct: 1175 SLHQKFAIKDLGVLKYFLGIEMATSPKGLFLSQRKYVIDLLQEVKMIDCKPARTPLDSKL 1234

Query: 1368 KLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCHMEAINRILR 1427
            KL+ E G+PLS IS YQR+VGKLIYLT+TRPDIT+AVS+VSQFMHAP   H+  + RILR
Sbjct: 1235 KLDLE-GEPLSNISYYQRLVGKLIYLTITRPDITYAVSLVSQFMHAPTEAHLNVVKRILR 1294

Query: 1428 YLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVGGNLVTWKSKKQNVV 1487
            YLKG+ G+GI+MK N    ++ ++DADWAG+  DRKSTTG+CTFVGGN+VTWKSKKQNV+
Sbjct: 1295 YLKGSIGRGIIMKNNGHTQIMAYTDADWAGNAIDRKSTTGYCTFVGGNIVTWKSKKQNVI 1354

Query: 1488 ARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFHERTK 1547
            ARSSAEAEYRAMASTA ELIW+K L+ D+    ++P+ +FCDNQAA HIASNPVFHERTK
Sbjct: 1355 ARSSAEAEYRAMASTACELIWLKSLISDLGFLSNKPMSLFCDNQAAMHIASNPVFHERTK 1414

Query: 1548 HIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGAHNLFEP 1557
            HIEVDCH++R++VQSK I+  F RS +QLAD+FTK+L     Q++LSKLG+ N F+P
Sbjct: 1415 HIEVDCHYVREQVQSKVIQTTFTRSHDQLADVFTKSLASTQFQRLLSKLGSINPFDP 1445

[Close]

BLAST of IVF0020972 vs. NCBI nr
Match: BBN67583.1 (Seven transmembrane MLO family protein [Prunus dulcis])

HSP 1 Score: 1261 bits (3262), Expect = 0.0
Identity = 685/1437 (47.67%), Postives = 927/1437 (64.51%), Query Frame = 0


Query: 168  ILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAIENWETTDQM 227
            +L    NY+PW+R+V + LGG+ K  F+NG+   P         +D     E W   DQ+
Sbjct: 35   VLLNEFNYLPWSRAVTLALGGRSKLGFVNGTIEAP---------EDSSPEYEAWLCKDQL 94

Query: 228  IMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELSNIKQGNLNN 287
            +MSWLL++MD K+S    + ++S  +W   K  YG   N A +F LK+ L++++QG+ + 
Sbjct: 95   VMSWLLNSMDPKLSEIFSFSESSLSLWKAVKDMYGNQNNAARVFQLKRNLASLQQGDKSF 154

Query: 288  SDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIRAQILSSAEM 347
               +  +   W EL MY P TI+   + KR+E + I+  L +L S +E +R+ IL + E+
Sbjct: 155  VHHLGCMKNMWNELDMYRPHTIDAAILLKRSEEDKIFHLLASLGSEYEDLRSHILMNPEL 214

Query: 348  PQFDDVVLKIEQEESRRRLMNPSPAPSTDNQAFRATYNKDRG----KG---NLWCDHCKR 407
            P F  V   I++EE RR++MN     S        T +K  G    KG   +L C HC  
Sbjct: 215  PSFASVCTTIQREEVRRKVMNVDIKSSVSEARAFVTNHKSSGDRVYKGKRPDLKCLHCNN 274

Query: 408  SSHNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFGMNGMNPNP 467
              H  + CW+LHP LKP+ +   S +  G +  +H+      + T+     G+     NP
Sbjct: 275  IGHLIDRCWILHPELKPKFENKPSRDYKGSQTRSHTNKNHAAAATSID---GLMNFTANP 334

Query: 468  SQGPADHGPPGFYGTTAAGPVQGPISFVTPAGPSGPNSDQLMQLVNQLNQLLQPRQQNSG 527
            +    +      Y  T     +G  S V   G       Q    + + N++  P+    G
Sbjct: 335  ADLINEFS---AYLHTK----KGSTSEVLTGGNQTALLGQFAGFLAESNRV--PQGDVPG 394

Query: 528  LSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFLNLITSNEPQFVTTANGGQTKIF 587
            +    LS      + HD  WIIDSGAT HM+   +   N  +   P  V+ ANG    + 
Sbjct: 395  IM-CALSTALNVSHSHDF-WIIDSGATDHMTNQYSKLYNFESYTTPSLVSIANGRGVPVL 454

Query: 588  GTGTISVFNKPVNEV-LYLPDFHSNLLSVNKIVKDLNCAVIFLPEKVIFQDIVSGEMIGE 647
            G G + + +  V    LY+P F   LLSV +I   LNC  IF P  V+FQD+ + ++IGE
Sbjct: 455  GRGKVKLISDSVESTALYVPSFPFQLLSVGRITNSLNCRAIFSPHNVVFQDLATKKLIGE 514

Query: 648  GILRNGLYYLQQN---NKCFVSSKNTDRGHLLHLRFGHPSDQVLNRLF-HYNYDSFSCDT 707
            G   NGLYY  +N    K F  S N +   L H R  HPS+ VL+ LF      S  C+ 
Sbjct: 515  GHYLNGLYYFSKNLNVPKGFQVSSNLEH-QLWHQRLAHPSEFVLSTLFPSLCKSSLVCEI 574

Query: 708  CRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEESYNHYKYYVTFIDDFSKTTWVYLL 767
            C  +K TRLPF +SI++  K F+++HSDVWGP+P ES++ Y+YYVTF+DDFS+ TW+YLL
Sbjct: 575  CHLSKFTRLPFNSSISRASKLFEIVHSDVWGPAPLESFDGYRYYVTFVDDFSRVTWLYLL 634

Query: 768  KTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYVNKEFTNFFKQHGILHQTTCTHTP 827
            K K+EV   F+ F N + N +++Q+ I RSDNGTEY +K  TN+   HGI+HQT+C  TP
Sbjct: 635  KFKSEVMDAFKNFHNLVMNHFSSQIHILRSDNGTEYTSKNMTNYLSTHGIIHQTSCVGTP 694

Query: 828  QQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILK 887
            QQNG++ERKNR LLEKTRAL+LQ NVPK+FWS  +L ATY+INRLPS  L++ SP E+++
Sbjct: 695  QQNGIAERKNRDLLEKTRALMLQMNVPKRFWSQGVLAATYLINRLPSRVLDSKSPYEVMQ 754

Query: 888  GRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIFLGYSSTQKGYKCFDPEQNKLYIS 947
             +KI+L H+R+FGCTC+ +I+   +DKLD  ++K +F+GYSSTQKGYKC++P   KL++S
Sbjct: 755  NKKINLSHLRIFGCTCYAHIQSHHRDKLDPKAIKCVFMGYSSTQKGYKCYNPCSRKLFVS 814

Query: 948  RDVVFREHEPFFTPTQDTTAATPSTLQFLFPSLDDEEN-------PSASSS--------- 1007
            RDV F E +P+F    D        L F FP  +  E        P  S S         
Sbjct: 815  RDVRFDEIKPYFNKPSDQNRQGEHLLDF-FPLPNPVETSDCVHSVPHNSDSHATNIDNVI 874

Query: 1008 -GGDYEDER-------NNTEDRQEEEGEDTI-----RRRSTRTRQPSTRLRDFVSHQVLY 1067
             G + E          N+T   +E   E T+     RR  TR R P +RL+D+V+  V Y
Sbjct: 875  IGDETEASEAQVVPHDNDTSSIEESGAEPTVIPSQPRRNPTRDRHPPSRLQDYVTFNVRY 934

Query: 1068 PIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMV 1127
            PI  F+NY+KVS ++  +LSKL   +EP  + EA  Q +W  AM EELKAL++N TW +V
Sbjct: 935  PIHKFVNYSKVSHSHAAFLSKLSNESEPRNFQEANLQDVWRLAMEEELKALDENKTWSVV 994

Query: 1128 ELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRI 1187
            +LPKGKK VG +W+YK K+NSDG++ER+KARLVA+GFTQT+G+DY+ETFAPVAKM+T R+
Sbjct: 995  QLPKGKKVVGSRWIYKTKFNSDGSIERHKARLVARGFTQTFGVDYKETFAPVAKMSTVRV 1054

Query: 1188 LMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGYFE---TSKVCKLRKAIYGLKQS 1247
            L+SVA NH W L+QMDVKNAFL GDLEEEVYM  PPG+ +   +S VCKL K+IYGLKQS
Sbjct: 1055 LLSVAVNHEWPLYQMDVKNAFLHGDLEEEVYMQLPPGHPQAQNSSMVCKLHKSIYGLKQS 1114

Query: 1248 PRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNNNQKLKEVKE 1307
            PRAWYAKLS+ L +  FK+S AD S+F+R       ++L+YVDDIII+G+N  ++  +K 
Sbjct: 1115 PRAWYAKLSSVLEKFGFKRSHADSSLFVRTGSVGKLVVLIYVDDIIITGDNIDEINTLKH 1174

Query: 1308 MLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKPATSPMETNI 1367
             L +KF IKDLG L YFLGIE+A S KGLFLSQRKY +DLL+E   +  KPA +P+++ +
Sbjct: 1175 SLHQKFAIKDLGVLKYFLGIEMATSPKGLFLSQRKYVIDLLQEVKMIDCKPARTPLDSKL 1234

Query: 1368 KLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCHMEAINRILR 1427
            KL+ E G+PLS IS YQR+VGKLIYLT+TRPDIT+AVS+VSQFMHAP   H+  + RILR
Sbjct: 1235 KLDLE-GEPLSNISYYQRLVGKLIYLTITRPDITYAVSLVSQFMHAPTEAHLNVVKRILR 1294

Query: 1428 YLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVGGNLVTWKSKKQNVV 1487
            YLKG+ G+GI+MK N    ++ ++DADWAG+  DRKSTTG+CTFVGGN+VTWKSK+QNV+
Sbjct: 1295 YLKGSIGRGIIMKNNGHTQIMAYTDADWAGNAIDRKSTTGYCTFVGGNIVTWKSKRQNVI 1354

Query: 1488 ARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFHERTK 1547
            ARSSAEAEYRA+ASTA ELIW+K L+ D+    ++P+ +FCDNQAA HIASNPVFHERTK
Sbjct: 1355 ARSSAEAEYRAVASTACELIWLKSLISDLGFLSNKPMSLFCDNQAAMHIASNPVFHERTK 1414

Query: 1548 HIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGAHNLFEP 1557
            HIEVDCH++R++VQSK I+  F RS +QLAD+FTK+L     Q++LSKLG+ N F+P
Sbjct: 1415 HIEVDCHYVREQVQSKVIQTTFTRSHDQLADVFTKSLASTQFQRLLSKLGSINPFDP 1445

[Close]

BLAST of IVF0020972 vs. NCBI nr
Match: PRQ52491.1 (putative RNA-directed DNA polymerase [Rosa chinensis])

HSP 1 Score: 1180 bits (3053), Expect = 0.0
Identity = 653/1405 (46.48%), Postives = 896/1405 (63.77%), Query Frame = 0


Query: 168  ILTGNNNYVPWARSVEIGLGGKGKRSFINGSKGKPKPKDQANPTDDELTAIENWETTDQM 227
            +L    NY+PW+R++ + LGG+ K +FING    P         D   +  E+W + DQ+
Sbjct: 26   VLLNEFNYLPWSRAITLALGGRSKLNFINGKNNIP---------DASSSEYESWLSKDQL 85

Query: 228  IMSWLLSTMDTKISSALMYCKTSKEIWTKAKTRYGQGKNFAHIFSLKQELSNIKQGNLNN 287
            +MSWL+++M+ K++    Y ++S+ +W   K  YG   N A +F LK++L+ I+QGNL+ 
Sbjct: 86   VMSWLINSMEPKLAEIFSYSESSQHLWDAVKDMYGNLNNAARVFQLKKDLAGIQQGNLSF 145

Query: 288  SDLVAEILTKWEELQMYLPETINPEEIYKRNEHELIYTYLGALDSSFEPIRAQILSSAEM 347
               +  +  KW EL  Y P TI+   + KR E + ++  L +L S +E +++ +L S E+
Sbjct: 146  VQHLGNLKAKWNELDTYRPHTIDATILLKRAEEDKVFQLLASLGSEYEDLKSHLLISPEL 205

Query: 348  PQFDDVVLKIEQEESRRRLMN-PSPAPSTDNQAFRA--TYNKDR---GKG-NLWCDHCKR 407
            P F  V   I+  E R+R+MN  + A  ++ +AF A  +   DR   GK  +L C HC+R
Sbjct: 206  PSFTTVCNSIQLGEVRKRVMNVDASAERSEARAFVANKSVTSDRTYKGKRPDLKCTHCER 265

Query: 408  SS-----HNKESCWVLHPHLKPQRKGGGSTNNGGWRREAHSAIGELNSGTNTKADFG--- 467
                   H +E CW+LHP LKP+         G  ++ ++ +        N KA+F    
Sbjct: 266  IGRTGIGHTRERCWILHPELKPKFNEDQKNQRGTIQKSSYIS--------NPKANFSNIS 325

Query: 468  --MNGMNPNPS----------QGPADHGPPGFYGTTAA--GPVQGPISFVTPAGPSGPNS 527
              M     NP           Q   D       G+T A  G   G ++    A     +S
Sbjct: 326  EDMMNFTSNPITLINEFATYLQKKQDSLESNENGSTTAMLGKFAGFLAKSNMA-----SS 385

Query: 528  DQLMQLVNQLNQLLQPRQQNSGLSELKLSNNSIYLNKHDSNWIIDSGATHHMSCSPNNFL 587
            + +  ++  ++            + L +S N      HD  WI+DSGA+ HM+ +     
Sbjct: 386  EDIPGIICAIS------------TALDVSKN------HDF-WIVDSGASDHMTNNSFILH 445

Query: 588  NLITSNEPQFVTTANGGQTKIFGTGTISVFNKPVNE-VLYLPDFHSNLLSVNKIVKDLNC 647
            +  T ++P  V+ ANG    I G G + +F+  V    L++P F   LLSV +++  L+C
Sbjct: 446  DFETLSKPSHVSIANGNDVPILGKGKLKLFSDSVESFALFVPSFPFQLLSVGRLMNSLDC 505

Query: 648  AVIFLPEKVIFQDIVSGEMIGEGILRNGLYYLQQNN---KCFVS-SKNTDRGHLLHLRFG 707
              IF P  V+FQD VS + IGEG   NGLYY+  ++   KCF++ SK+  +  L H R  
Sbjct: 506  LAIFSPYNVVFQDRVSKKKIGEGFFLNGLYYISTSSSFSKCFLTESKSATQQQLWHKRLA 565

Query: 708  HPSDQVLNRLF-HYNYDSFSCDTCRFAKQTRLPFPTSITKVEKCFDLIHSDVWGPSPEES 767
            HPS  VL+ LF  +   S  C+TC  +K TRLPF  S ++  + F+++HSDVWGP+  ES
Sbjct: 566  HPSFHVLSILFPSFCKVSHECETCHMSKFTRLPFQISQSRTTQPFEIVHSDVWGPASLES 625

Query: 768  YNHYKYYVTFIDDFSKTTWVYLLKTKNEVFSCFQEFFNFITNQYNAQVKIFRSDNGTEYV 827
            ++ Y++YVTFIDDF++TT+VYLLK K+EVF CFQ+F N + N +++++ I RSDNGTEY 
Sbjct: 626  FDGYRFYVTFIDDFTRTTFVYLLKFKSEVFKCFQDFHNLVKNHFSSKICILRSDNGTEYT 685

Query: 828  NKEFTNFFKQHGILHQTTCTHTPQQNGVSERKNRHLLEKTRALLLQNNVPKKFWSDAILT 887
            +K  T++    GI+H T+C  TPQQNG++ERKNR LLEK RAL+LQ NVPKKFWS  I T
Sbjct: 686  SKIMTDYLSAQGIIHHTSCVGTPQQNGIAERKNRDLLEKARALMLQTNVPKKFWSQGIQT 745

Query: 888  ATYIINRLPSPNLNNLSPLEILKGRKIDLDHIRVFGCTCFVYIK--RKDKLDKNSVKTIF 947
            A YIINRLPS  LN  SP E+LKGRK+D+ H+RVFGCTCFV+++   +DK D  ++K +F
Sbjct: 746  AAYIINRLPSSVLNFRSPFEVLKGRKVDITHLRVFGCTCFVHVQSNHRDKFDPRAIKCVF 805

Query: 948  LGYSSTQKGYKCFDPEQNKLYISRDVVFREHEPFF-----------------TPTQDTTA 1007
            LGYSSTQKGYKC++ +  K ++SRDV F E + FF                 TP     A
Sbjct: 806  LGYSSTQKGYKCYNSQTRKFFVSRDVRFDESDSFFQLSDNEPQGEHICDLFPTPIPVEAA 865

Query: 1008 A-TPSTLQFLFPSLDDEENPSASSSGGDYEDERNNTEDRQEEEGEDTI--RRRSTRTRQP 1067
              TPS+ Q +   +D EE  + S           NT+D Q E   +T   RR   R R  
Sbjct: 866  VDTPSSQQPVQQIVDTEEVQADS-----------NTQDHQPEVVPNTPQPRRNPPRGRHL 925

Query: 1068 STRLRDFVSHQVLYPIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNE 1127
              R +++ ++   YP+    +Y   S  +  +L K+    EP  ++EA Q  +W +AM++
Sbjct: 926  PARFQEYETYTPRYPLAQVAHYTSTSSPHSAFLIKISKETEPRNFEEANQSPVWKKAMDD 985

Query: 1128 ELKALEQNNTWDMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQ 1187
            ELKAL+ N TW +V+LPKG+K VG +W+YKIK+NSDG++ER+KARLVA+GFTQT+G+DY+
Sbjct: 986  ELKALDDNRTWSIVKLPKGQKIVGARWIYKIKFNSDGSIERHKARLVARGFTQTFGVDYK 1045

Query: 1188 ETFAPVAKMNTFRILMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGY---FETSK 1247
            ETFAPVAKMNT R+L+SVA N GW L+QMDVKNAFL GDLEE+VYM  PPG+    E   
Sbjct: 1046 ETFAPVAKMNTVRVLLSVAVNCGWSLYQMDVKNAFLHGDLEEDVYMRLPPGHPRESEAGM 1105

Query: 1248 VCKLRKAIYGLKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDII 1307
            VCKL KA+YGLKQSPRAWY+KLS+ L  ++FK+S AD S+FIR       ++LVYVDD+I
Sbjct: 1106 VCKLHKALYGLKQSPRAWYSKLSSVLLASSFKRSHADSSLFIRNGKAGKLVVLVYVDDLI 1165

Query: 1308 ISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGK 1367
            I+G+N  ++K +K  L   F IKDLG L YFLGIE+ HS+ G+FL+QRKY +DLL E G 
Sbjct: 1166 ITGDNMDEIKSLKSALHNTFAIKDLGPLKYFLGIEMDHSSNGIFLNQRKYVVDLLDEAGM 1225

Query: 1368 LGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHA 1427
              +KPA +P+ + +K++ E G+PLS I  YQR+VGKLIYLT+TRPD+T+AVS+VSQFMH+
Sbjct: 1226 KDSKPAHTPLSSRLKIDIE-GEPLSDICVYQRLVGKLIYLTITRPDLTYAVSLVSQFMHS 1285

Query: 1428 PRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCTFVG 1487
            P T H++ + RILRYLKGT  +GI+MK N    +VG+SD+DWAG+  DRKSTTG+CTF+G
Sbjct: 1286 PTTHHLQIVKRILRYLKGTVDRGIVMKNNGHFNLVGYSDSDWAGNAIDRKSTTGYCTFIG 1345

Query: 1488 GNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAA 1511
            GNLVTWKSKKQ VVA SSAEAEYRAMASTA ELIW+K LL D+ I C+ PI + CDNQAA
Sbjct: 1346 GNLVTWKSKKQTVVACSSAEAEYRAMASTACELIWLKTLLGDLGIVCTLPICLHCDNQAA 1377

[Close]

BLAST of IVF0020972 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 503.1 bits (1294), Expect = 8.4e-142
Identity = 268/602 (44.52%), Postives = 382/602 (63.46%), Query Frame = 0


Query: 969  EENPSASSSGGDYEDERNNTEDRQEEEGEDTIRRRSTRTRQPSTRLRDFVSHQV----LY 1028
            + + S SSS  D     N     Q +  E ++     RTR+P+  L+D+  H V    ++
Sbjct: 4    DADASTSSSSIDIMPSAN----IQNDVPEPSVHTSHRRTRKPA-YLQDYYCHSVASLTIH 63

Query: 1029 PIQNFINYNKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMV 1088
             I  F++Y KVSP Y  +L  +    EP+TY+EAK+  +W  AM++E+ A+E  +TW++ 
Sbjct: 64   DISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEIC 123

Query: 1089 ELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRI 1148
             LP  KKP+GCKWVYKIKYNSDGT+ERYKARLVAKG+TQ  GID+ ETF+PV K+ + ++
Sbjct: 124  TLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKL 183

Query: 1149 LMSVATNHGWDLFQMDVKNAFLQGDLEEEVYMTPPPGY-------FETSKVCKLRKAIYG 1208
            +++++  + + L Q+D+ NAFL GDL+EE+YM  PPGY          + VC L+K+IYG
Sbjct: 184  ILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYG 243

Query: 1209 LKQSPRAWYAKLSTFLTENNFKKSTADCSVFIRKNGDSITIILVYVDDIIISGNNNQKLK 1268
            LKQ+ R W+ K S  L    F +S +D + F++        +LVYVDDIII  NN+  + 
Sbjct: 244  LKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVD 303

Query: 1269 EVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYTLDLLKETGKLGTKPATSPM 1328
            E+K  LK  F ++DLG L YFLG+EIA S  G+ + QRKY LDLL ETG LG KP++ PM
Sbjct: 304  ELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 363

Query: 1329 ETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAVSIVSQFMHAPRTCHMEAIN 1388
            + ++  +   G        Y+R++G+L+YL +TR DI+FAV+ +SQF  APR  H +A+ 
Sbjct: 364  DPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVM 423

Query: 1389 RILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCD-RKSTTGFCTFVGGNLVTWKSKK 1448
            +IL Y+KGT GQG+     +   +  FSDA +    D R+ST G+C F+G +L++WKSKK
Sbjct: 424  KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 483

Query: 1449 QNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFH 1508
            Q VV++SSAEAEYRA++    E++W+     ++Q+  S+P  +FCDN AA HIA+N VFH
Sbjct: 484  QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 543

Query: 1509 ERTKHIEVDCHFIRDK-VQSKEIEIPFIRSQEQLADIFTKALD---KKTSQQILSKLGAH 1555
            ERTKHIE DCH +R++ V    +   F    EQ  D FT+ L    + T   I+S  G  
Sbjct: 544  ERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLA 598

[Close]

BLAST of IVF0020972 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-50
Identity = 103/224 (45.98%), Postives = 145/224 (64.73%), Query Frame = 0


Query: 1239 ILVYVDDIIISGNNNQKLKEVKEMLKRKFDIKDLGKLSYFLGIEIAHSTKGLFLSQRKYT 1298
            +L+YVDDI+++G++N  L  +   L   F +KDLG + YFLGI+I     GLFLSQ KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1299 LDLLKETGKLGTKPATSPMETNIKLNTEDGKPLSGISQYQRIVGKLIYLTVTRPDITFAV 1358
              +L   G L  KP ++P+   +  +    K     S ++ IVG L YLT+TRPDI++AV
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1359 SIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAG-SCDRKS 1418
            +IV Q MH P     + + R+LRY+KGT   G+ + +NS   V  F D+DWAG +  R+S
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1419 TTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIW 1462
            TTGFCTF+G N+++W +K+Q  V+RSS E EYRA+A TA+EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0020972 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 104.4 bits (259), Expect = 8.7e-22
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 1033 NKVSPTYQIYLSKLDGNNEPNTYDEAKQQTIWIQAMNEELKALEQNNTWDMVELPKGKKP 1092
            NK++P Y + ++      EP +   A +   W QAM EEL AL +N TW +V  P  +  
Sbjct: 10   NKLNPKYSLTITTTI-KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNI 69

Query: 1093 VGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTFRILMSVA 1150
            +GCKWV+K K +SDGT++R KARLVAKGF Q  GI + ET++PV +  T R +++VA
Sbjct: 70   LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of IVF0020972 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1345 IYLTVTRPDITFAVSIVSQFMHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGF 1404
            +YLT+TRPD+TFAV+ +SQF  A RT  M+A+ ++L Y+KGT GQG+     S   +  F
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1405 SDADWAGSCD-RKSTTGFCTFV 1426
            +D+DWA   D R+S TGFC+ V
Sbjct: 61   ADSDWASCPDTRRSVTGFCSLV 82

[Close]

BLAST of IVF0020972 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 825 NRHLLEKTRALLLQNNVPKKFWSDAILTATYIINRLPSPNLNNLSPLEILKGRKIDLDHI 884
           NR ++EK R++L +  +PK F +DA  TA +IIN+ PS  +N   P E+         ++
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 885 RVFGCTCFVYI---KRKDKLDKNSVKTIFL 912
           R FGC  +++    K K +  K   K  +L
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKKGEEKGSYL 91

The following BLAST results are available for this feature:

BLAST of IVF0020972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.4e-204	32.44	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.2e-197	31.80	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	3.3e-167	31.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.3e-144	31.91	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	3.6e-49	45.98	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0020972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DP15	0.0e+00	68.97	Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G0...	[more]
A0A5A7SYC4	0.0e+00	61.78	Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00...	[more]
A0A4Y1RIV4	0.0e+00	47.37	Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_014560 ...	[more]
A0A5H2XGM8	0.0e+00	47.23	Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_120S000...	[more]
A0A2P6S1E1	0.0e+00	46.05	Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2...	[more]

BLAST of IVF0020972 vs. NCBI nr


Match Name	Identity	Description
TYK00722.1	68.97	copia-like protein [Cucumis melo var. makuwa] >TYK25285.1 copia-like protein [Cu...	[more]
KAA0036222.1	61.78	copia-like protein [Cucumis melo var. makuwa]	[more]
BBH03633.1	47.81	Seven transmembrane MLO family protein [Prunus dulcis]	[more]
BBN67583.1	47.67	Seven transmembrane MLO family protein [Prunus dulcis]	[more]
PRQ52491.1	46.48	putative RNA-directed DNA polymerase [Rosa chinensis]	[more]

BLAST of IVF0020972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.4e-142	44.52	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.6e-50	45.98	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	8.7e-22	45.30	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.4e-16	50.00	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	2.3e-06	33.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..35
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 221..365 e-value: 5.6E-7 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 982..1005
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 964..981
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 964..1012
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 539..1013 coord: 1050..1409
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1402..1540 e-value: 1.0612E-79 score: 256.626
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 164..203 e-value: 3.0E-7 score: 30.1
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1078..1317 e-value: 1.8E-79 score: 266.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 645..701 e-value: 7.4E-8 score: 32.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 708..887 e-value: 8.9E-43 score: 147.9
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 715..815 e-value: 7.6E-12 score: 45.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 703..878 score: 22.962776
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 712..872
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1078..1507

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020972.2	IVF0020972.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding