IVF0020855 (gene) Melon (IVF77) v1

Overview


Name	IVF0020855
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reticulon-like protein
Location	chr04: 31570527 .. 31572095 (-)
RNA-Seq Expression	IVF0020855
Synteny	IVF0020855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTCCGATCGTTTATTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGGTATGTTAAGATCTTCTCATTTCTGGGTTTTTTTTCCTTGATGGATCCTTTTAAATGTCTTTTGGATTGCTCTATTTCGGTTCTCTATTGATTTTGCTATTGAATTTCGTAGCAGTGATGGGAAAATTTTAATCCTTGAATTATTTTCTTCTTTTCTTCATCGCAAATGAAATTCTTGCTGTGGATTCTGCTTTTCACTGCAGCTGCTAGAGTTCTAGGATCCATTTCTTTTGCTATAAAATCACTAAGGATTTGATTTAACTGTCGAGTGTTTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAAATTGCCTCTTGACTTGCTATCTCTTCAATTTGAATATCAACGATGAATGGTAAACTGATATATAAGTTTGAGAATGCATTTTCTTTAATAGATAAAGAGGCATTTCCCTATTGGATTTGACAATGGTCTTGAATAATGATTAGGTCCGGTTTCAAATTCTCTAGATTTTCAACTACTTAATCTGATAATTTGTCCTCGCTTTCTTTTACATTTGACGAACATTTTGGGATTTTTACTTCCTTAAGTTTCATTCACTTAGTAATATTATGAGATATGTACATGCATTTGGGAAAGATGATGAACCTGATTGAGTGTGAGACAATAGTTAGATCTTCACATGTTCTTTTGAGCGTAATAAGCTTAGAGATGAAACAACTCAGTAGTTTTCGAGCATTCAAATACTTATCAATTAAAAATATAGTGTTTAGTTTTTGTTCCACTGCTCTCTCTTAAATTTCTCTGTCTTTCCAGGTTTCCTTAGTTCCATAATAATCAAATGTAGCTTAACTTCTAAGTACTTGGATTAAGGTTACTTCTAAATCTGTTACTTTTCTTCCTGAGCAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGTAAGTTTTCAATCTTCAGTTTCCATAATTGGACGATGATCAATGGGTTTCATAGACATTTTTTCTCTCGATGACAGGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

mRNA sequence

ATGGGTTCCTCCGATCGTTTATTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGGTATTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Coding sequence (CDS)

ATGGGTTCCTCCGATCGTTTATTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGGTATTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGCGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCTCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCATGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAGGACCCCAAATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCTGTTATCAGTGGCTTGACTGATATTATTACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAAAAGTATGAAGATTATGTAGATAAACATGCCATATTGATGTACAGAAAATTGTATCAGTTCTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Protein sequence

MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWILEKEKLS

Homology

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BLAST of IVF0020855 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.5e-46
Identity = 98/190 (51.58%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 3   SSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLIS 62
           SSD+LF       ++L   +V ADV+LWR+KN++ GI+ +T+A+W+VFE   YT+ +LIS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIV-ADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLIS 63

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAM 122
           SVLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R HVN LL VS DIAM
Sbjct: 64  SVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAM 123

Query: 123 GKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYR 182
            +D +L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  
Sbjct: 124 ARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICN 183

Query: 183 KLYQFYVKLD 193
           K  + Y++L+
Sbjct: 184 KTRELYLRLE 192

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BLAST of IVF0020855 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.4e-33
Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNR 84
           AD++LWRR++L+ G+++I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR
Sbjct: 42  ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101

Query: 85  PAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISG 144
               LPEL LSE+MVN AA+  R  +N LL ++ D+ +G D +LFFKV  CLWL+S I  
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 161

Query: 145 LTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWIL 204
              + TL Y   +L +TIPALY KY+  VDK    ++R+L   Y  +DE  V++   W L
Sbjct: 162 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWSL 221

Query: 205 EKEK 209
            K+K
Sbjct: 222 SKDK 224

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BLAST of IVF0020855 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 67/151 (44.37%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNR 84
           AD++LWR +     +L+ +   W +FER GY LLS +S+VLLLLV I FLWAKSA++LNR
Sbjct: 23  ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 82

Query: 85  PAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISG 144
           P PP+P + + E+  N+AA  +R  +N +LS++ DI + ++P    +V+  LW IS +  
Sbjct: 83  PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGT 142

Query: 145 LTDIITLGYTSLLLVLTIPALYEKYEDYVDK 176
           L + +TL Y  +LL L+ P +YEKY+D++D+
Sbjct: 143 LINSLTLVYIGVLLSLSFPIVYEKYQDHIDE 173

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BLAST of IVF0020855 vs. ExPASy Swiss-Prot
Match: Q6NPD8 (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-28
Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLI--TLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASIL 84
           AD+I+W  KN   G LL+  T   W +FE+CGY+    + +  LL V I+FLWAKSA + 
Sbjct: 15  ADLIMW--KNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILF 74

Query: 85  NRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVI 144
           NRP P LP L ++E+ V   A  IR  +NT+L+V+++I +G++ K  F+V+  LW +S +
Sbjct: 75  NRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFV 134

Query: 145 SGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDE 194
               + +T+ Y  ++L L IP LYE+Y+D +D+   L +R +   Y K+DE
Sbjct: 135 GNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

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BLAST of IVF0020855 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 68/188 (36.17%), Postives = 112/188 (59.57%), Query Frame = 0


Query: 6   RLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVL 65
           RLF   +P  K+L      AD+ LWR K ++ G+L    A+W++FE   Y LL+ +    
Sbjct: 51  RLFGREKPVHKVLGGGKP-ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFA 110

Query: 66  LLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKD 125
           +  +  +FLW+ + + +++  P +PE+++ ED + +  S +R  +N  L++ ++IA GKD
Sbjct: 111 IFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKD 170

Query: 126 PKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLY 185
            K F  V A LW++S+I    + +TL YT+ +L+ TIP LYEKYED VD +     R++ 
Sbjct: 171 VKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIK 230

Query: 186 QFYVKLDE 194
           + Y  LDE
Sbjct: 231 KQYAVLDE 237

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BLAST of IVF0020855 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 195/210 (92.86%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 211
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of IVF0020855 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 195/210 (92.86%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 211
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of IVF0020855 vs. ExPASy TrEMBL
Match: A0A1S4DUP5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 193/210 (91.90%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +   DVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI---DVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 211
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

[Close]

BLAST of IVF0020855 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.0e-95
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILN-RPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD 120
           ISSVLLLLVTIIFLWAKSASILN RPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD 120

Query: 121 IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL 180
           IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL
Sbjct: 121 IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL 180

Query: 181 MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS 211
           MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of IVF0020855 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 185/210 (88.10%), Postives = 194/210 (92.38%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLT GILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIV-ADVILWRRKNLTMGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 211
           Y+KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YKKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

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BLAST of IVF0020855 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 1.99e-126
Identity = 195/210 (92.86%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of IVF0020855 vs. NCBI nr
Match: XP_016899688.1 (PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo])

HSP 1 Score: 362 bits (928), Expect = 4.37e-125
Identity = 193/210 (91.90%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +   DVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI---DVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

[Close]

BLAST of IVF0020855 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (925), Expect = 1.39e-124
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILN-RPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD 120
           ISSVLLLLVTIIFLWAKSASILN RPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQD 120

Query: 121 IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL 180
           IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL
Sbjct: 121 IAMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAIL 180

Query: 181 MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 MYRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of IVF0020855 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida])

HSP 1 Score: 349 bits (896), Expect = 3.53e-120
Identity = 185/210 (88.10%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLT GILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIV-ADVILWRRKNLTVGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           +SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRS VNTLLSVSQDI
Sbjct: 61  VSSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTLLSVSQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTD+ITLGYTSLLLVLTIPALYEKYEDYVD+H ILM
Sbjct: 121 AMGKDPRLFFKVAACLWLISVISGLTDLITLGYTSLLLVLTIPALYEKYEDYVDRHVILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           YRKL+QFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 181 YRKLHQFYVKLDEKRVLTYQQWILEKEKLS 209

[Close]

BLAST of IVF0020855 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus])

HSP 1 Score: 348 bits (894), Expect = 7.12e-120
Identity = 185/210 (88.10%), Postives = 194/210 (92.38%), Query Frame = 0


Query: 1   MGSSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSL 60
           MGSSDRLF       +++   +V ADVILWRRKNLT GILLITLATWLVFERCGYTLLSL
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIV-ADVILWRRKNLTMGILLITLATWLVFERCGYTLLSL 60

Query: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120
           ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDI
Sbjct: 61  ISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDI 120

Query: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           Y+KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YKKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of IVF0020855 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.7e-47
Identity = 98/190 (51.58%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 3   SSDRLFVGSEPFMKLLAAVLVFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLIS 62
           SSD+LF       ++L   +V ADV+LWR+KN++ GI+ +T+A+W+VFE   YT+ +LIS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIV-ADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLIS 63

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAM 122
           SVLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R HVN LL VS DIAM
Sbjct: 64  SVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAM 123

Query: 123 GKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYR 182
            +D +L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  
Sbjct: 124 ARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICN 183

Query: 183 KLYQFYVKLD 193
           K  + Y++L+
Sbjct: 184 KTRELYLRLE 192

[Close]

BLAST of IVF0020855 vs. TAIR 10
Match: AT3G10915.3 (Reticulon family protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.9e-34
Identity = 81/186 (43.55%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 23  VFADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASIL 82
           V AD++LWRR++L+ G+++I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  
Sbjct: 7   VAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFR 66

Query: 83  NRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVI 142
           NR    LPEL LSE+MVN AA+  R  +N LL ++ D+ +G D +LFFKV  CLWL+S I
Sbjct: 67  NRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAI 126

Query: 143 SGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQW 202
                + TL Y   +L +TIPALY KY+  VDK    ++R+L   Y  +DE  V++   W
Sbjct: 127 GSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSW 186

Query: 203 ILEKEK 209
            L K+K
Sbjct: 187 SLSKDK 191

[Close]

BLAST of IVF0020855 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNR 84
           AD++LWRR++L+ G+++I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR
Sbjct: 42  ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101

Query: 85  PAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISG 144
               LPEL LSE+MVN AA+  R  +N LL ++ D+ +G D +LFFKV  CLWL+S I  
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 161

Query: 145 LTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWIL 204
              + TL Y   +L +TIPALY KY+  VDK    ++R+L   Y  +DE  V++   W L
Sbjct: 162 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWSL 221

Query: 205 EKEK 209
            K+K
Sbjct: 222 SKDK 224

[Close]

BLAST of IVF0020855 vs. TAIR 10
Match: AT3G10915.6 (Reticulon family protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNR 84
           AD++LWRR++L+ G+++I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR
Sbjct: 10  ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 69

Query: 85  PAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFKVAACLWLISVISG 144
               LPEL LSE+MVN AA+  R  +N LL ++ D+ +G D +LFFKV  CLWL+S I  
Sbjct: 70  QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 129

Query: 145 LTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWIL 204
              + TL Y   +L +TIPALY KY+  VDK    ++R+L   Y  +DE  V++   W L
Sbjct: 130 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWSL 189

Query: 205 EKEK 209
            K+K
Sbjct: 190 SKDK 192

[Close]

BLAST of IVF0020855 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.4e-33
Identity = 80/185 (43.24%), Postives = 118/185 (63.78%), Query Frame = 0


Query: 25  ADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNR 84
           AD++LWRR++L+ G+++I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR
Sbjct: 42  ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101

Query: 85  PAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIAMGKDPKLFFK-VAACLWLISVIS 144
               LPEL LSE+MVN AA+  R  +N LL ++ D+ +G D +LFFK V  CLWL+S I 
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 161

Query: 145 GLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMYRKLYQFYVKLDEMRVLTYQQWI 204
               + TL Y   +L +TIPALY KY+  VDK    ++R+L   Y  +DE  V++   W 
Sbjct: 162 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWS 221

Query: 205 LEKEK 209
           L K+K
Sbjct: 222 LSKDK 225

The following BLAST results are available for this feature:

BLAST of IVF0020855 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M392	9.5e-46	51.58	Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1	[more]
Q8GYH6	5.4e-33	43.48	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9LT71	3.0e-31	44.37	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q6NPD8	3.1e-28	40.35	Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1	[more]
Q9FFS0	2.2e-26	36.17	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]

BLAST of IVF0020855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMY4	1.2e-96	92.86	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3B6E8	1.2e-96	92.86	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]
A0A1S4DUP5	1.4e-95	91.90	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]
A0A5A7TLS2	3.0e-95	92.42	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A0A0LFE7	1.2e-91	88.10	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1	[more]

BLAST of IVF0020855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442476.1	1.99e-126	92.86	PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reti...	[more]
XP_016899688.1	4.37e-125	91.90	PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo]	[more]
KAA0044144.1	1.39e-124	92.42	reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038904646.1	3.53e-120	88.10	reticulon-like protein B12 [Benincasa hispida]	[more]
XP_004137740.1	7.12e-120	88.10	reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Cs...	[more]

BLAST of IVF0020855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54120.1	6.7e-47	51.58	Reticulon family protein	[more]
AT3G10915.3	2.9e-34	43.55	Reticulon family protein	[more]
AT3G10915.2	3.8e-34	43.48	Reticulon family protein	[more]
AT3G10915.6	3.8e-34	43.48	Reticulon family protein	[more]
AT3G10915.4	9.4e-33	43.24	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 24..177 e-value: 2.9E-49 score: 167.0
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 24..193 score: 29.992704
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 23..208
None	No IPR available	PANTHER	PTHR10994:SF65	RETICULON-LIKE PROTEIN B12	coord: 23..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020855.1	IVF0020855.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane