IVF0020554 (gene) Melon (IVF77) v1

Overview


Name	IVF0020554
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CCHC-type domain-containing protein
Location	chr05: 24951153 .. 24955599 (+)
RNA-Seq Expression	IVF0020554
Synteny	IVF0020554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACACTTCCTTCCAATCTCTCCAACCTCACGGATCCAACATGGACAAGGACAACAATGCCATCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGACTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCAAACCTCCTTTCTCCTCTGCTCCTGCTGCTCCTTCAAAAGCTGTAGAAAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGCGGCCGTGGACACGAGGTTATCTTCTATTTTCCTTCCTATTCTAACTTAATTAGTCGATTTGTTCCCATCTGGCACATATGAGTTTTGTTTGAGATATATTGCAACATTGCTGTTCAAGAACAAGAGGGGTTTCGAAGTAATTACAGTCTGATGCGTTTTTGTTACGAATTCGAGAATCAAAGGAAACAGTAAACGTAAATTGTAGAATAATCGAAAGGTGGTTCACTGACTATGTTAACATCATCTAAGGGCAGTGGTAGAGATCAATTATATTATCAGAGATTAATGCCAGATTACAGATTATAGAGTGCTTAGAGAGTGTATACAGAGCGCACCAATCTAAACCTTAGAGCCAAAATTGTAAATAATATAAATACGAATACATACCAACACCCCTAAACCCCAATAGTGATTGGTCATTCAGAGCAGCAAGTAACAAATTTAAGACATTCCTGTATAATTAGAAACAGTTTTGATGTGCATACATATTTCAATAAAGAATTGTTTGAGAGAGCCCAAGCTTCATCAGGGGAAATCGGTATTTATCCTAATGGTTTGTTTATTGGAAATCCGGTTTCGAACTCTTTTCCATTGAATTATAGCCATGTGTGTTTCATCAACGTGTACATGTATAATTTTTCTTATTACAGTGTCTTCTTCTCATCCATTGTCATTTTCTAATGATTTGATTATTGCACTAATTGAGTTATACTCTTGACTGGTGTTCTGCAGATCAGTGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAGGTAGCTGCTACGAAACGTGTAAAGGTAAAAATGATTTTTTTTTTGTTCTTTTACAATGAACGTATCGCAGAGGTGTACATATATGGCTTCAAAGTACACAAATTTAGCCTAATAGCATACTGTGATACTAGTATAGATAGAATTTGAACTAAAGGAACTGCTCTTAAGAAACCCAGTGCATCTGAAGGGAGTAGAGACAGAGAGTGCGAACTCCATAATATTTTAACTGAGTCCTTTTTCTAAATCAAATCAACACGGAGCAAGTTTGTTTATTAAATGATATCTAATTTGTAATGAATTGGCACTCTTACTAAAAAGACATTTTGAGCAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACGAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGTCAACAATGAAAAAGGTACCTTCTAACATTCTCATTTATCAAAAGACACTCGTACATTTTCATCAGCTGTTTGGTCATGATAGAATGTATTTTATCAAATTGTGTTTGTGTTTAGTTAGTTATGCATTGCTCTCTCATTCTATATTAAAAAAATCAAATTTGGTTTAGATAAATTTGACGTCCACTGAATTGCCAAAATAAGTAAGCAAGAAACAATTATTATCGTTGTTTTTCATGTCCAACTCCCACCAGACAGAGCTCCATATAAAATTGTCGTTCTCAGATTTGCGTTGGAGAACGATGTTGGCTAGGGCTCAATTTATCTGAGTGTAATTAATGGGTTGGTTGGTATCATTAAGCTTAATTTTTTTTTTCCGATGATGGTAAACACACCCTCTGGTGAGGAGTTCTATATGTGGCTTTTGTTTGTCATTAGCCATTACTTATCTTCATCTTCCGTCAATATACTGCCTCCGTCAACTTTTCATCTTTCTTAGGGATTGTTATCCAAATCTTTTTCCGTCGAGTGACATTTTACTCGACTGGAGCTTCTTATAGTTGGCTCTCTTTTTGTGGGCTTCTCCTTTTTGTTTGCCTGGTATACTTTCGTTTCTTCTCGATGAAAGTTAGTTTTTAATTTAAAATGGCCTAGATCACATTAGAAAAGTAGAGAGACTTCACAATCTTTTTAAGATACATGAGTTACTATCTAATTGACTATTGATTTTGAGATGGAATAAAAAGTAACTTTTCATCTTTCTCTACACATTCATATGCTTGGGGGTTTTGATAACAATATAAACCTTTGCTAATTGGGGCTTAGTTCTCAATACCCTCTAACCCATTGGCATCTGGATGCGCACTTTAGTATGCACTAAGCAGTTGGTGCTTGGGATTGGCATATTGTATCAGAATGTTGTCAGTAATTTATAATTATGTTGGATTCTTACTTTTCTTTGTACTTTGTGGCATGGTATGACGCCGGCTGTGTGGTTAGAAATGTAACTTGGGAATTTAAATCCATCTACTCGAGTATTTTCTATTTTCTCATGTCTGGAACTATTCACTGATGTGATGATTGGAAAAAAAATATAAATCCTGAGGCTAACATTATTTGATTACCCCCTCTGCTTGAAATTTAAACCCATCTGTCAATCCTTGCAGAAGCCAAGGATCCGGAGGGTGTATTCGATAATCCAGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGTAAGTCTTTCTCTTATGTTTTTTCCTTCTGAACAATTGGTTGGTTTCCATCCCTACAATTGTTTTAGTTTCAATCATACCATTTCTTACCGAGAAAAGCATCGTAGTTACTGAATTGAATGAAGAAATTTTACCACGAGTCACAAATGTAGATTTCAGGAATATTCATAGTGAGGCAAACTGTGTTTCTTGAGCCCTTTACTTGGCAGACCAATTTTACAGGTGAAATTGTCAGCTCGTTTATGAAAAATATATATGTTAATGCCCCAATTAACTAAAATTTGCGCTTAAAGCTTATTTTATCAGGTCGGTACTTTCTAATTATTGCACTAGTTCATGCATCTACACATTTGGTCCAAGAATATTCACCTAACGATATCGTAAGAAAATGCTGTTTTAAGTAACTGGCCCATATGATGGTCTATAATTTCTTTTGTTAGGGATAAAACCAATTTATATCTCTAAAACGTTGTACTCTTAGAACTCCAAACTAATAATTCTGCCAGTTTAAACCCTAACTTTCAAATCAATTTAGATGAATTGTTAGTGATTATAGCTCCTTTCACTTAATTCCAATATAAGATCAAAACCACATGAATATAATTATTCTTCTCCCAAATCCCATCGCACCTAAGAAGCAAGAAAAATTGTCATGTGATTCTTTCCAAATAAGTAAAGAAAGAATAGAGCGAGACTAGAAGATGAAAAATCATTCGAAGTTCTTGAAAATAGCACCACCATTTATTACCTAACTGCATTTTTCTCATTTACATCTGTCCTTGTATATGGAGAAGCTTCATTCATAAGTGAAAGTTATGAAGTGTGATACACGTACGAAGAAGTTTTATACACGGGTGAAAGTTATGCGTTAAACAGTTTTTACCTACTTATGATTAAGAGTAAGCTCTTAGGTCAAAACCCTTCTGCATACTAACGATATCTATCGATGGAACCTTCCACTCCACGAGAAACTTGAAGCAAGAATACCTCCATTATATTATCTAGCATTTGTATCATCTCTAACTAGAGATTGCTTGTTTCTTTTATGAGAAGCATTGGCAATTATAGGACTGCCCAGAAGATTACATAAAACAGTTCCAATGTGATCTAAGAGAACTCAAATTTGTTGAAACCCAGTACCATTTCCTGATGTATTACCCAACAATCTTCAACTGATTGCTGATTTTATTTACATGATTGTAGGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCACTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGTAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGGCTACCGTTTAAATAACATTCGAAGTGATGGTTTTTGGCTTGTGAAAGGTTCAACCACCTTTGGGAGTTTCTTCCTCAAATCTCCAAAAATTTTCCCCAAATTTCGACGAATGAGTCTTTAGAATGTCAATTTGCAATTTTATATGCTCATTTTTTGAAAGGTTTATGTTAAGTTATTAATCAATTGAGC

mRNA sequence

CAAACACTTCCTTCCAATCTCTCCAACCTCACGGATCCAACATGGACAAGGACAACAATGCCATCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGACTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCAAACCTCCTTTCTCCTCTGCTCCTGCTGCTCCTTCAAAAGCTGTAGAAAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAGGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACGAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGTCAACAATGAAAAAGAAGCCAAGGATCCGGAGGGTGTATTCGATAATCCAGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCACTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGTAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGGCTACCGTTTAAATAACATTCGAAGTGATGGTTTTTGGCTTGTGAAAGGTTCAACCACCTTTGGGAGTTTCTTCCTCAAATCTCCAAAAATTTTCCCCAAATTTCGACGAATGAGTCTTTAGAATGTCAATTTGCAATTTTATATGCTCATTTTTTGAAAGGTTTATGTTAAGTTATTAATCAATTGAGC

Coding sequence (CDS)

ATGGACAAGGACAACAATGCCATCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGACTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCAAACCTCCTTTCTCCTCTGCTCCTGCTGCTCCTTCAAAAGCTGTAGAAAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCCGAGCTACTCCTTTCTGAGGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAGGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACGAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGTCAACAATGAAAAAGAAGCCAAGGATCCGGAGGGTGTATTCGATAATCCAGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCACTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGTAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGGCTACCGTTTAA

Protein sequence

MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV

Homology

[Close]

BLAST of IVF0020554 vs. ExPASy Swiss-Prot
Match: Q3ZCC4 (TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 72/254 (28.35%), Postives = 101/254 (39.76%), Query Frame = 0


Query: 32  PNPNPTS------NSSKPPFSSAPAAPSKAVEKPKKAPRTRPKLTPELLLSEDGLGYVLR 91
           P P P S        ++P   S   AP     K +   R  PKL  E L+SE GL   LR
Sbjct: 25  PFPPPASPGREDGEGAEPEEESGRGAPVPVPPK-RTVKRNIPKLNAERLISERGLP-ALR 84

Query: 92  HFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGE 151
           H     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  
Sbjct: 85  HVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVECLGNKKEVQTCLKR 144

Query: 152 LRERVARGGDPTKWREAPILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDML 211
           +R             + PIL++D   NN                        D++EE+  
Sbjct: 145 IR------------LDLPILHEDFVSNN------------------------DEVEENNG 204

Query: 212 QEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEAN 271
            +V     +  L N         G++E               S  +  LTEE++ R+E N
Sbjct: 205 HDVTATELDHFLTNSY-------GSVEFA-------------SESSRSLTEEEQQRIERN 220

Query: 272 RLKALERAAAKARS 280
           +  ALER  AK  S
Sbjct: 265 KQLALERRQAKLLS 220

[Close]

BLAST of IVF0020554 vs. ExPASy Swiss-Prot
Match: Q91WA1 (TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 5.8e-06
Identity = 73/250 (29.20%), Postives = 96/250 (38.40%), Query Frame = 0


Query: 32  PNPNPTSNSSKPPFSSAPAAPSKAVEKPKK--APRTRPKLTPELLLSEDGLGYVLRHFPR 91
           P P P S    P  +         V  P K    R  PKL    L SE GL   LRH   
Sbjct: 25  PFPPPASPERDPADAEPEEGSGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFD 84

Query: 92  AFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRER 151
             K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  +R  
Sbjct: 85  KTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR-- 144

Query: 152 VARGGDPTKWREAPILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVY 211
                      + PI++ +D VNN  E  +  G    P+ ++    G D           
Sbjct: 145 ----------LDLPIVH-EDFVNNNDEVGEANG----PDVSA---TGFD----------- 204

Query: 212 EKATEEPLQNEQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKA 271
                 P     SDS                   +   S  T  LTEEQ+ R+E N+  A
Sbjct: 205 ------PFLTSSSDS-------------------RKFASEPTRSLTEEQQQRIERNKQLA 217

Query: 272 LERAAAKARS 280
           LER  AK  S
Sbjct: 265 LERRQAKLLS 217

[Close]

BLAST of IVF0020554 vs. ExPASy Swiss-Prot
Match: Q9BVW5 (TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 69/252 (27.38%), Postives = 100/252 (39.68%), Query Frame = 0


Query: 28  PSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPKKAPRTRPKLTPELLLSEDGLGYVLRHF 87
           P  A         ++P   S   AP +   K +   R  PKL  + L+SE GL   LRH 
Sbjct: 27  PPPASPERQDGEGTEPDEESGNGAPVRVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHV 86

Query: 88  PRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELR 147
               K++G+GHE  DL+ LI     W   + P   FE F+ +VE + + K V+ CL  +R
Sbjct: 87  FDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 146

Query: 148 ERVARGGDPTKWREAPILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDMLQE 207
                        + PIL++D   NN++ A+                N   D+    L  
Sbjct: 147 ------------LDLPILHEDFVSNNDEVAE----------------NNEHDVTSTEL-- 206

Query: 208 VYEKATEEPLQNEQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRL 267
                  +P     S+S                   +   S  +  LTEEQ+ R+E N+ 
Sbjct: 207 -------DPFLTNLSES-------------------EMFASELSRSLTEEQQQRIERNKQ 220

Query: 268 KALERAAAKARS 280
            ALER  AK  S
Sbjct: 267 LALERRQAKLLS 220

[Close]

BLAST of IVF0020554 vs. ExPASy Swiss-Prot
Match: Q0IHI4 (TIMELESS-interacting protein OS=Xenopus laevis OX=8355 GN=tipin PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 65/242 (26.86%), Postives = 106/242 (43.80%), Query Frame = 0


Query: 37  TSNSSKPPFSSAPAAPSKAVEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGR 96
           T N+ +     AP    + V++P      +PKL  + L S+ GL   LRH     K++G+
Sbjct: 48  TENAGQTQREEAPKPARRVVKRP------QPKLDGQRLASQRGLP-ALRHMFDDVKFKGK 107

Query: 97  GHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDP 156
           GHE  DL+ L+     W   + P   FE F++++E +   K V+ CL ++R         
Sbjct: 108 GHETEDLKILLRQMENWAHRLFPKLQFEDFLNRLESMGNKKEVQTCLKKIR--------- 167

Query: 157 TKWREAPILNDD-----DDVNNEKEAKD-PEGVFDNPEEASLRNNGADDIEEDMLQEVYE 216
               + PI++DD       V  E  A D P   F  P+E  + +           Q V  
Sbjct: 168 ---MDLPIVHDDFLSEEVVVQTEDHAIDMPSEDFSFPDELHVPSPS---------QPVKV 227

Query: 217 KATEEPLQN-EQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKA 272
             +EE LQ  E++  L     ME +  Q  +Q    +  S+ +E+ ++     +A  L A
Sbjct: 228 DLSEETLQRIERNRRLALERRMEKMQAQAESQALSQATQSDPNEIPDD---AFDAEMLDA 258

[Close]

BLAST of IVF0020554 vs. ExPASy Swiss-Prot
Match: Q4QR88 (TIMELESS-interacting protein OS=Rattus norvegicus OX=10116 GN=Tipin PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 70/250 (28.00%), Postives = 94/250 (37.60%), Query Frame = 0


Query: 32  PNPNPTSNSSKPPFSSAPAAPSKAVEKPKK--APRTRPKLTPELLLSEDGLGYVLRHFPR 91
           P P P S    P  +         V  P K    R  PKL    L SE GL   LRH   
Sbjct: 25  PFPPPGSPERDPAEAEPDEGSGAPVPVPPKRIVKRNIPKLDATRLTSERGLP-ALRHVFD 84

Query: 92  AFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRER 151
             K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  +R  
Sbjct: 85  KTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR-- 144

Query: 152 VARGGDPTKWREAPILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVY 211
                      + PI+++D   NN                        D++EE       
Sbjct: 145 ----------LDLPIVHEDFVNNN------------------------DEVEE------- 204

Query: 212 EKATEEPLQNEQSDSLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKA 271
                        D+  TG      A    + + K   S  +  LTEEQ+ R+E N+  A
Sbjct: 205 ---------TNSLDAAATGFD----AFVTSSSDSKRFASEASRNLTEEQQQRIEKNKQLA 217

Query: 272 LERAAAKARS 280
           LER  AK  S
Sbjct: 265 LERRQAKLLS 217

[Close]

BLAST of IVF0020554 vs. ExPASy TrEMBL
Match: A0A5D3BGW4 (TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001060 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180

Query: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240
           EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN
Sbjct: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240

Query: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 284
           QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV
Sbjct: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of IVF0020554 vs. ExPASy TrEMBL
Match: A0A1S3C4P4 (TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180

Query: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240
           EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN
Sbjct: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240

Query: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 284
           QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV
Sbjct: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of IVF0020554 vs. ExPASy TrEMBL
Match: A0A0A0LI96 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.4e-140
Identity = 265/284 (93.31%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           M+KDNNA+ APTGC+KCGKPGHWSRDCPSSAPNPNPTSNSS P FSS PAAPSKAVEKPK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI+DLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN-DDDDVNNEKEAKD 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN DDDDVNNEKEAKD
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 240
           P+ VFDN EEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLT GGTMEGVA    
Sbjct: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVA---- 240

Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 284
           NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSL TV
Sbjct: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of IVF0020554 vs. ExPASy TrEMBL
Match: A0A6J1G4B9 (TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.4e-124
Identity = 243/284 (85.56%), Postives = 252/284 (88.73%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSK  EKPK
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NSSSPPSSSAPAAPSKVAEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND-DDDVNNEKEAKD 180
           Y FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD
Sbjct: 121 YPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKAT-EEPLQNEQSDSLTTGGTMEGVANQE 240
            EG+FDN EEAS +NNGADDIEEDMLQEVYEKAT EEPL N QSDS T G TMEGV NQE
Sbjct: 181 SEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE 240

Query: 241 PNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 283
              EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Sbjct: 241 ---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT 276

[Close]

BLAST of IVF0020554 vs. ExPASy TrEMBL
Match: A0A6J1KG39 (TIMELESS-interacting protein OS=Cucurbita maxima OX=3661 GN=LOC111493575 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.0e-123
Identity = 241/284 (84.86%), Postives = 252/284 (88.73%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNP    N S+PP SSAPAAP K  EKPK
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP----NFSRPPSSSAPAAPPKVAEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND-DDDVNNEKEAKD 180
           Y FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD
Sbjct: 121 YPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKAT-EEPLQNEQSDSLTTGGTMEGVANQE 240
            EG+FDN EEASL+NNGADDIEEDMLQEVYEKAT EEPL N QSDS T G T+EGV NQE
Sbjct: 181 SEGLFDNQEEASLKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETVEGVVNQE 240

Query: 241 PNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 283
              EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Sbjct: 241 ---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT 276

[Close]

BLAST of IVF0020554 vs. NCBI nr
Match: XP_008456510.1 (PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-interacting protein [Cucumis melo var. makuwa] >TYJ97891.1 TIMELESS-interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 553 bits (1425), Expect = 2.30e-198
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNEKEAKDP 180

Query: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240
           EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN
Sbjct: 181 EGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEPN 240

Query: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283
           QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV
Sbjct: 241 QEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of IVF0020554 vs. NCBI nr
Match: XP_004139395.1 (TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein Csa_019321 [Cucumis sativus])

HSP 1 Score: 509 bits (1310), Expect = 6.95e-181
Identity = 265/284 (93.31%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           M+KDNNA+ APTGC+KCGKPGHWSRDCPSSAPNPNPTSNSS P FSS PAAPSKAVEKPK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI+DLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDD-VNNEKEAKD 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDD VNNEKEAKD
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 240
           P+ VFDN EEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLT GGTMEGVANQEP
Sbjct: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEP 240

Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283
               KTSNSSETSELTEEQRVRMEANRLKALERAAAKARSL TV
Sbjct: 241 ----KTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of IVF0020554 vs. NCBI nr
Match: XP_038889611.1 (TIMELESS-interacting protein [Benincasa hispida])

HSP 1 Score: 471 bits (1213), Expect = 6.70e-166
Identity = 256/300 (85.33%), Postives = 262/300 (87.33%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSS-----------------KP 60
           M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSS                 +P
Sbjct: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSSDCPSSAPNPNPTSNSSRP 60

Query: 61  PFSSAPAAPSKAVEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDL 120
           PFSSAPAAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPR FKYRGRGHEISDL
Sbjct: 61  PFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRVFKYRGRGHEISDL 120

Query: 121 ENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP 180
            NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP
Sbjct: 121 GNLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP 180

Query: 181 ILNDDDDVNNEKEAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSD 240
           ILNDDD VNNEKEAKDPEG+FDN EEA LRNNGADDIEEDMLQEVYEKATEEP QN QSD
Sbjct: 181 ILNDDD-VNNEKEAKDPEGIFDNQEEA-LRNNGADDIEEDMLQEVYEKATEEPSQNVQSD 240

Query: 241 SLTTGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283
           S T G T+EGVANQEP    K SNSSET +LTEEQR RMEANRLKALERAAAKARSL TV
Sbjct: 241 SFTIGETIEGVANQEP----KISNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV 293

[Close]

BLAST of IVF0020554 vs. NCBI nr
Match: KAG6599343.1 (TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030333.1 TIMELESS-interacting protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455 bits (1171), Expect = 9.04e-160
Identity = 243/284 (85.56%), Postives = 253/284 (89.08%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPN    SS+PP SSAPAAPSK  EKPK
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN----SSRPPSSSAPAAPSKVAEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND-DDDVNNEKEAKD 180
           Y FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD
Sbjct: 121 YPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEE-PLQNEQSDSLTTGGTMEGVANQE 240
            EG+FDN EEAS +NNGADDIEEDMLQEVYEKATEE PL N QSDS T G TMEGV NQE
Sbjct: 181 SEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE 240

Query: 241 PNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 282
           PN    TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Sbjct: 241 PN----TSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT 275

[Close]

BLAST of IVF0020554 vs. NCBI nr
Match: XP_022946681.1 (TIMELESS-interacting protein [Cucurbita moschata])

HSP 1 Score: 454 bits (1169), Expect = 1.89e-159
Identity = 243/284 (85.56%), Postives = 252/284 (88.73%), Query Frame = 0


Query: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60
           MDKDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPN    SS PP SSAPAAPSK  EKPK
Sbjct: 1   MDKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPN----SSSPPSSSAPAAPSKVAEKPK 60

Query: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120
           KAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRVRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND-DDDVNNEKEAKD 180
           Y FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+PI+ND DDD+NNE EAKD
Sbjct: 121 YPFEHFVHKVEQVAATKRVKMCLGELREKVARGGDPTKWRESPIVNDADDDINNENEAKD 180

Query: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEE-PLQNEQSDSLTTGGTMEGVANQE 240
            EG+FDN EEAS +NNGADDIEEDMLQEVYEKATEE PL N QSDS T G TMEGV NQE
Sbjct: 181 SEGLFDNQEEASFKNNGADDIEEDMLQEVYEKATEEEPLMNLQSDSFTIGETMEGVVNQE 240

Query: 241 PNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLAT 282
              EP TSNS+ET  LTE+QR RMEANRLKALERAAAKARS  T
Sbjct: 241 ---EPNTSNSNETL-LTEQQRARMEANRLKALERAAAKARSSPT 276

[Close]

BLAST of IVF0020554 vs. TAIR 10
Match: AT3G02820.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.9e-62
Identity = 146/281 (51.96%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAP--NPNPTSNSSKP---PFSSAPAAPSKAVEKPKKAP 68
           +APTGC+KCG+PGHWSRDCPSSAP    N  S+SS P   P +    + SK+      AP
Sbjct: 3   SAPTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIAPAP 62

Query: 69  RT------RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHI 128
           +       RPKLTPELLLSEDGLGYVLR+FP++FKYRGRG E+SDL NLI LY EWH+H+
Sbjct: 63  KVTKTRVQRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHL 122

Query: 129 LPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN--DDDDVNNEK 188
           LPYYSF+HFVHKV+QVA+TKRVK C+ ELRERVA G DP K  E    N    DD + ++
Sbjct: 123 LPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSDDQDMDQ 182

Query: 189 EAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVA 248
            + D E +   P ++   +  AD  E+ ML E+++ A++ P  +EQ+   ++  T E  A
Sbjct: 183 PSHDEENI---PSKSVDADTNADAFEDSMLNEIFDNASKLP-SDEQNMDKSSELTEEQRA 242

Query: 249 NQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAK 277
             E N   +     +   ++EEQRVRMEANRLKALERA A+
Sbjct: 243 RMEAN---RLKAMEKAQNISEEQRVRMEANRLKALERAKAR 276

The following BLAST results are available for this feature:

BLAST of IVF0020554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ZCC4	2.6e-06	28.35	TIMELESS-interacting protein OS=Bos taurus OX=9913 GN=TIPIN PE=2 SV=1	[more]
Q91WA1	5.8e-06	29.20	TIMELESS-interacting protein OS=Mus musculus OX=10090 GN=Tipin PE=1 SV=2	[more]
Q9BVW5	1.7e-05	27.38	TIMELESS-interacting protein OS=Homo sapiens OX=9606 GN=TIPIN PE=1 SV=2	[more]
Q0IHI4	1.1e-04	26.86	TIMELESS-interacting protein OS=Xenopus laevis OX=8355 GN=tipin PE=1 SV=1	[more]
Q4QR88	2.4e-04	28.00	TIMELESS-interacting protein OS=Rattus norvegicus OX=10116 GN=Tipin PE=2 SV=1	[more]

BLAST of IVF0020554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGW4	1.1e-153	100.00	TIMELESS-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C4P4	1.1e-153	100.00	TIMELESS-interacting protein OS=Cucumis melo OX=3656 GN=LOC103496437 PE=3 SV=1	[more]
A0A0A0LI96	2.4e-140	93.31	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009510 P...	[more]
A0A6J1G4B9	5.4e-124	85.56	TIMELESS-interacting protein OS=Cucurbita moschata OX=3662 GN=LOC111450673 PE=3 ...	[more]
A0A6J1KG39	6.0e-123	84.86	TIMELESS-interacting protein OS=Cucurbita maxima OX=3661 GN=LOC111493575 PE=3 SV...	[more]

BLAST of IVF0020554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456510.1	2.30e-198	100.00	PREDICTED: TIMELESS-interacting protein [Cucumis melo] >KAA0063565.1 TIMELESS-in...	[more]
XP_004139395.1	6.95e-181	93.31	TIMELESS-interacting protein [Cucumis sativus] >KGN60764.1 hypothetical protein ...	[more]
XP_038889611.1	6.70e-166	85.33	TIMELESS-interacting protein [Benincasa hispida]	[more]
KAG6599343.1	9.04e-160	85.56	TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022946681.1	1.89e-159	85.56	TIMELESS-interacting protein [Cucurbita moschata]	[more]

BLAST of IVF0020554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02820.1	5.9e-62	51.96	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 13..29 e-value: 7.4E-7 score: 38.8
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 13..29 e-value: 1.6E-8 score: 34.3
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 14..29 score: 11.581206
None	No IPR available	GENE3D	4.10.60.10		coord: 10..68 e-value: 8.8E-10 score: 40.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..253
None	No IPR available	PANTHER	PTHR13220:SF11	TIMELESS-INTERACTING PROTEIN	coord: 9..278
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 68..149 e-value: 1.1E-23 score: 82.9
IPR040038	TIPIN/Csm3/Swi3	PANTHER	PTHR13220	TIMELESS INTERACTING-RELATED	coord: 9..278
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 9..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020554.1	IVF0020554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0043111	replication fork arrest
biological_process	GO:0048478	replication fork protection
cellular_component	GO:0031298	replication fork protection complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding