IVF0020519 (gene) Melon (IVF77) v1

Overview
NameIVF0020519
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMitogen-activated protein kinase
Locationchr11: 21832750 .. 21833077 (-)
RNA-Seq ExpressionIVF0020519
SyntenyIVF0020519
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAACAAGAACTCAGTGGAAGAGGAAGGTGGGTGTGGCCATCGGAGATGGAAGAGAGGTTAGTGGCCTCACTCAGTAAATTAGATTTATCAGGTTATATTAAATGCACAGTTAGCTTGTAATAAGAAAAAACTGTATCTTAGAAACAAAAAAAAAAAAAAAAAAAAAAAAGATAAAAAGAACGTACACAGGACATGGAAAACTGAGTAGTAAGGCACCCCTCCCCCCAAGTCTCTTGCTTTGTCTATAGCTCCCCCCCTTCAAAGCAGGAAGGTAACACCTTATCTAAATCCCAATACAGAAACAAAGTTAATGATGTCTGA

mRNA sequence

ATGGATGAAACAAGAACTCAGTGGAAGAGGAAGGTGGGTGTGGCCATCGGAGATGGAAGAGAGGTTAGTGGCCTCACTCACTCCCCCCCTTCAAAGCAGGAAGGTAACACCTTATCTAAATCCCAATACAGAAACAAAGTTAATGATGTCTGA

Coding sequence (CDS)

ATGGATGAAACAAGAACTCAGTGGAAGAGGAAGGTGGGTGTGGCCATCGGAGATGGAAGAGAGGTTAGTGGCCTCACTCACTCCCCCCCTTCAAAGCAGGAAGGTAACACCTTATCTAAATCCCAATACAGAAACAAAGTTAATGATGTCTGA

Protein sequence

MDETRTQWKRKVGVAIGDGREVSGLTHSPPSKQEGNTLSKSQYRNKVNDV
Homology
BLAST of IVF0020519 vs. ExPASy TrEMBL
Match: A0A0A0KBJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G179470 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0

Query: 1  MDETRTQWKRKVGVAIGDGREVSGLTHS-------PPSKQEGNTLSKSQYRNKVNDV 51
          MDETRTQWKRKVGVA+GDG+E SGLTH        PPSKQ+G+TLSK+QYRNKVND+
Sbjct: 1  MDETRTQWKRKVGVAVGDGKEASGLTHEIRFISSPPPSKQKGDTLSKTQYRNKVNDL 57

BLAST of IVF0020519 vs. ExPASy TrEMBL
Match: A0A5D3DVL6 (Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00110 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-05
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 1   MDETRTQWKRKVGVAIGDGREVSGLT 27
           MDETRTQWKRKVGVAIGDGREVSGLT
Sbjct: 613 MDETRTQWKRKVGVAIGDGREVSGLT 638

BLAST of IVF0020519 vs. NCBI nr
Match: KAE8646938.1 (hypothetical protein Csa_021009 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 3.12e-08
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 1  MDETRTQWKRKVGVAIGDGREVSGLTH 27
          MDETRTQWKRKVGVA+GDG+E SGLTH
Sbjct: 1  MDETRTQWKRKVGVAVGDGKEASGLTH 27

BLAST of IVF0020519 vs. NCBI nr
Match: KAA0054580.1 (mitogen-activated protein kinase 20-like isoform X1 [Cucumis melo var. makuwa] >TYK27544.1 mitogen-activated protein kinase 20-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 3.15e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 1   MDETRTQWKRKVGVAIGDGREVSGLT 26
           MDETRTQWKRKVGVAIGDGREVSGLT
Sbjct: 613 MDETRTQWKRKVGVAIGDGREVSGLT 638

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBJ91.8e-1473.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G179470 PE=4 SV=1[more]
A0A5D3DVL62.6e-05100.00Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
KAE8646938.13.12e-0888.89hypothetical protein Csa_021009 [Cucumis sativus][more]
KAA0054580.13.15e-08100.00mitogen-activated protein kinase 20-like isoform X1 [Cucumis melo var. makuwa] >... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020519.1IVF0020519.1mRNA