IVF0020494 (gene) Melon (IVF77) v1

Overview


Name	IVF0020494
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Trans-resveratrol di-O-methyltransferase-like
Location	chr10: 17521634 .. 17521852 (+)
RNA-Seq Expression	IVF0020494
Synteny	IVF0020494

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATAGAACAACGTTTGACCTACACGTTCGGTTGAAGAAGTTTGGAACGAATGAACGTTTGGCTGAAGAAGAACGCTCGGAACGACGGCGACGGAGTGACCTTGACCAAGCTGAAGAACAACAACGCTCGATGATAGAGCGACGTTCGAAAGACGGAGCGACAGAAAGTGAAGAAAACATTGGGGAAGGCGCACGCTGGGAGTTTAAAATTTGA

mRNA sequence

ATGGAAGATAGAACAACGTTTGACCTACACGTTCGGTTGAAGAAGTTTGGAACGAATGAACGTTTGGCTGAAGAAGAACGCTCGGAACGACGGCGACGGAGTGACCTTGACCAAGCTGAAGAACAACAACGCTCGATGATAGAGCGACGTTCGAAAGACGGAGCGACAGAAAGTGAAGAAAACATTGGGGAAGGCGCACGCTGGGAGTTTAAAATTTGA

Coding sequence (CDS)

ATGGAAGATAGAACAACGTTTGACCTACACGTTCGGTTGAAGAAGTTTGGAACGAATGAACGTTTGGCTGAAGAAGAACGCTCGGAACGACGGCGACGGAGTGACCTTGACCAAGCTGAAGAACAACAACGCTCGATGATAGAGCGACGTTCGAAAGACGGAGCGACAGAAAGTGAAGAAAACATTGGGGAAGGCGCACGCTGGGAGTTTAAAATTTGA

Protein sequence

MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEENIGEGARWEFKI

Homology

[Close]

BLAST of IVF0020494 vs. ExPASy TrEMBL
Match: A0A5D3E0D2 (Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00670 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE 60
          MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE
Sbjct: 1  MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE 60

Query: 61 NIGEGARWE 70
          NIGEGARWE
Sbjct: 61 NIGEGARWE 69

[Close]

BLAST of IVF0020494 vs. NCBI nr
Match: TYK28970.1 (trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 5.42e-34
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE 60
          MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE
Sbjct: 1  MEDRTTFDLHVRLKKFGTNERLAEEERSERRRRSDLDQAEEQQRSMIERRSKDGATESEE 60

Query: 61 NIGEGARWE 69
          NIGEGARWE
Sbjct: 61 NIGEGARWE 69

The following BLAST results are available for this feature:

BLAST of IVF0020494 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0020494 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0D2	1.3e-26	100.00	Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of IVF0020494 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28970.1	5.42e-34	100.00	trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0020494 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020494.1	IVF0020494.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008171	O-methyltransferase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity