IVF0020399 (gene) Melon (IVF77) v1

Overview


Name	IVF0020399
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	chr05: 1134230 .. 1135819 (-)
RNA-Seq Expression	IVF0020399
Synteny	IVF0020399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTAAGAGATGAGTTCGATCAGATCGTTGATTCCCAGAGAAGAAGCAGTTGGTCGGCGGCAAGGGTTTTTCTTCGTCGTTCTCAGCTTCTCACTCCTTCTAATATTTCTCTATGCTGCCGTTATTTCCAAGCTTCTTCCACCTTCAAACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTAAAAATTGTTTTGGTATATCCGTGTTTCTTTTAATTGATTTCTTTGTTGTGTCTAGTCTAGTCCATAATTAGGGTTCTTTGTGTTGTTATTCTGGAAAAATAGAAGATTGTATTTAAGTGTTAGTGTTAGTTTCTGTTTTTTTACTTGAATTCTGGATTTGATCTTGATTTGGAGAGGGGAAAAGAATTGGGTGCCGAATTAAGATCAAAGCAAATCTGATTAGTTGATCAATGTGAAGGATGAGAAAAAACAGGGCCGAATAGAATAAAAATCGTTCTGTTTTCTCACCATTTCTGCTCATGGTTTTCACAATTCCTCTGTTCGACATTTGAATTTTTATCTAATTTCCAAAAACAAAAGCAAGTTTTTGTAGGCAACAAAACATGGAAACCAATATAGTTTCAGAAACCAAAAACCAAATACAAAATGGTTGTAAAATGGGACCTAGTAATCAGTTTCTCTTAGAGATGCTGTGGTGGTTAATGGAAATAACTCATGACTCAACTGTTTTGATATTCAAACAGCCATAATAATATATATGGATGACAAAAGGCTGCCATCCATACTAGAGAATGAACGAGAATGAGTATGTATACGTCTGAATACTAGCTTGCCTATGAAGCAAACCAAATTCTCGTTCCACATTTTTATGAAAACTGGTTTAGTGTTGGTGCCTTTGATCTCTTGAAAAGATCAAGTCTAAGTAAACTAATATGGTAACTTGTTTCTTACACTAGTATTAATCAACAATGACCTTTATTTGTAATGCGTTTCTTCTTTCTTATTAGGTATTACTGTCTCCTTGTGCCCTTGACATTACCTATCCTTTACGTTGCCGTTTATTTCCATTGGTTGAGTATGAAACTATTCAAGCATGCTTGATCATATCGTCGTATGAAGATGAAGGTTTCGAGCTAGTTGAGCATCTAAATCTTGGGAAGATTCAACCACCTTCCATGTCTGGTTGAACAACGATGTGATGCGTTTGGAATTTTCAGTACCTAAGGCAATAGAGGATGTACAGGTGAATTACCGGAGACATATGATGATCATGCCGAGCGAATTCCACATCGGCGAGTGTCTTGGGGTGATTTTTGTAGAGGCTTTTGTTATGAAATATTCATCCATAGTGGTTGAATGGTATGGCTCTATCATTAACTAAGGTCAGTGTCTTCAAAGCCAATCTAGGGAAAACGAAAACCAACTTGGCTTATACATATGCACAAATCTTGAGTCTTGAGAATTGCTTGATTCTACTTTGAGTAGTTGTTTGATTAAAAGTGGCGTGGGGGAGAATTGTTGCAGAGTCTACCTTTGCCAAATTCTAAATTTACAATATTAATGTCAATTTTATTGTTTTTAATTTATAAAAAATCAATTTTATTGTTTTTAATTTATAAAAAA

mRNA sequence

GTTTTAAGAGATGAGTTCGATCAGATCGTTGATTCCCAGAGAAGAAGCAGTTGGTCGGCGGCAAGGGTTTTTCTTCGTCGTTCTCAGCTTCTCACTCCTTCTAATATTTCTCTATGCTGCCGTTATTTCCAAGCTTCTTCCACCTTCAAACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTATTACTGTCTCCTTGTGCCCTTGACATTACCTATCCTTTACGTTGCCGTTTATTTCCATTGGTTGAGTATGAAACTATTCAAGCATGCTTGATCATATCGTCGTATGAAGATGAAGGTTTCGAGCTAGTTGAGCATCTAAATCTTGGGAAGATTCAACCACCTTCCATGTCTGGTTGAACAACGATGTGATGCGTTTGGAATTTTCAGTACCTAAGGCAATAGAGGATGTACAGGTGAATTACCGGAGACATATGATGATCATGCCGAGCGAATTCCACATCGGCGAGTGTCTTGGGGTGATTTTTGTAGAGGCTTTTGTTATGAAATATTCATCCATAGTGGTTGAATGGTATGGCTCTATCATTAACTAAGGTCAGTGTCTTCAAAGCCAATCTAGGGAAAACGAAAACCAACTTGGCTTATACATATGCACAAATCTTGAGTCTTGAGAATTGCTTGATTCTACTTTGAGTAGTTGTTTGATTAAAAGTGGCGTGGGGGAGAATTGTTGCAGAGTCTACCTTTGCCAAATTCTAAATTTACAATATTAATGTCAATTTTATTGTTTTTAATTTATAAAAAATCAATTTTATTGTTTTTAATTTATAAAAAA

Coding sequence (CDS)

ATGAGTTCGATCAGATCGTTGATTCCCAGAGAAGAAGCAGTTGGTCGGCGGCAAGGGTTTTTCTTCGTCGTTCTCAGCTTCTCACTCCTTCTAATATTTCTCTATGCTGCCGTTATTTCCAAGCTTCTTCCACCTTCAAACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTATTACTGTCTCCTTGTGCCCTTGACATTACCTATCCTTTACGTTGCCGTTTATTTCCATTGGTTGAGTATGAAACTATTCAAGCATGCTTGA

Protein sequence

MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYYCLLVPLTLPILYVAVYFHWLSMKLFKHA

Homology

[Close]

BLAST of IVF0020399 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of IVF0020399 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          MSSIRSLIPREE VGRRQG  FVV+SF  LLIFLYAA ISKLLPPSNNAFLSAIQNDW+Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of IVF0020399 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.8e-21
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 19 GFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYYCLLVPLTLPILYVAVYFH 78
          G+FF++      + FLYAAV+SKLLPPS+N+ + AIQNDWYYC LVPLTLPIL+VAVYFH
Sbjct: 17 GWFFLIFGSFSFVFFLYAAVVSKLLPPSDNSVIQAIQNDWYYCFLVPLTLPILFVAVYFH 76

Query: 79 WLSMKLFKHA 89
          WLSMKLFKHA
Sbjct: 77 WLSMKLFKHA 86

[Close]

BLAST of IVF0020399 vs. ExPASy TrEMBL
Match: A0A2G9H8L1 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-20
Identity = 52/70 (74.29%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 19 GFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYYCLLVPLTLPILYVAVYFH 78
          G+FF+++     L FLYAAVISKL PPS+N  + AIQNDWYYC LVPLTLPIL VAVYFH
Sbjct: 21 GWFFIIIGSFSFLTFLYAAVISKLQPPSDNVVIRAIQNDWYYCFLVPLTLPILVVAVYFH 80

Query: 79 WLSMKLFKHA 89
          WLSMKLFKHA
Sbjct: 81 WLSMKLFKHA 90

[Close]

BLAST of IVF0020399 vs. ExPASy TrEMBL
Match: A0A803R7D3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.9e-20
Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 18 QGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYYCLLVPLTLPILYVAVYF 77
          +G F + +   L L F YAA++SKLLPPSNN  +SAIQNDWYYC LVPLTLP+L VAVYF
Sbjct: 10 RGCFSIAIGLVLFLGFFYAAIVSKLLPPSNNPIISAIQNDWYYCFLVPLTLPVLVVAVYF 69

Query: 78 HWLSMKLFKHA 89
          HWLSMK+FKHA
Sbjct: 70 HWLSMKMFKHA 80

[Close]

BLAST of IVF0020399 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 172 bits (437), Expect = 4.10e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of IVF0020399 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140 bits (353), Expect = 3.21e-41
Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          MSSIRS + REEA  R QGF F+V+SF  LL+FLYAA+ISKLL PS+NAFLSAIQ DWYY
Sbjct: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          CLLVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 67 CLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of IVF0020399 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 108 bits (269), Expect = 1.62e-28
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 19 GFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYYCLLVPLTLPILYVAVYFH 78
          G+FF++      + FLYAAV+SKLLPPS+N+ + AIQNDWYYC LVPLTLPIL+VAVYFH
Sbjct: 17 GWFFLIFGSFSFVFFLYAAVVSKLLPPSDNSVIQAIQNDWYYCFLVPLTLPILFVAVYFH 76

Query: 79 WLSMKLFKHA 88
          WLSMKLFKHA
Sbjct: 77 WLSMKLFKHA 86

[Close]

BLAST of IVF0020399 vs. NCBI nr
Match: PIN13861.1 (hypothetical protein CDL12_13514 [Handroanthus impetiginosus])

HSP 1 Score: 106 bits (265), Expect = 7.39e-28
Identity = 56/88 (63.64%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          M S+R  +     V    G+FF+++     L FLYAAVISKL PPS+N  + AIQNDWYY
Sbjct: 5  MLSLRDFLVSNGKVF--WGWFFIIIGSFSFLTFLYAAVISKLQPPSDNVVIRAIQNDWYY 64

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          C LVPLTLPIL VAVYFHWLSMKLFKHA
Sbjct: 65 CFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of IVF0020399 vs. NCBI nr
Match: KAF3954934.1 (hypothetical protein CMV_019783 [Castanea mollissima])

HSP 1 Score: 106 bits (264), Expect = 9.91e-28
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60
          M S  S      +  +  G FFV +     + FL+AAVISKLLPPS+NA +S+IQNDWYY
Sbjct: 1  MRSPSSSSSSSSSSSQLWGCFFVTIGSVFFVGFLFAAVISKLLPPSHNALISSIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88
          C LVPLTLP+L VAVYFHW+SMKLFKHA
Sbjct: 61 CFLVPLTLPVLVVAVYFHWISMKLFKHA 88

The following BLAST results are available for this feature:

BLAST of IVF0020399 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0020399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBS7	3.4e-40	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KIB0	1.5e-35	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
A0A022PQH2	7.8e-21	72.86	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]
A0A2G9H8L1	3.0e-20	74.29	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 P...	[more]
A0A803R7D3	3.9e-20	70.42	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of IVF0020399 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33919.1	4.10e-54	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAG6605922.1	3.21e-41	80.68	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
EYU17719.1	1.62e-28	72.86	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
PIN13861.1	7.39e-28	63.64	hypothetical protein CDL12_13514 [Handroanthus impetiginosus]	[more]
KAF3954934.1	9.91e-28	61.36	hypothetical protein CMV_019783 [Castanea mollissima]	[more]

BLAST of IVF0020399 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 19..87 e-value: 5.7E-17 score: 62.4
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 17..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020399.2	IVF0020399.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity