IVF0020363 (gene) Melon (IVF77) v1

Overview


Name	IVF0020363
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING finger protein 165-like
Location	chr05: 7676956 .. 7677704 (-)
RNA-Seq Expression	IVF0020363
Synteny	IVF0020363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTTTCATCTGACACCACCCTACAATTCAATCTCATTTTCAACCGTTACTCTGCTTCCATCATCATCATCCATGTCTTTCTCCGCTACTTCGTGCCTTGAATGTTCTTTCTCCGGCTATCCAAACACCGATCAAACCCTCATTGTTCGATTTGGGTCTTGTAGCCGCCTGATTTCCCAGTCTCCTTCTCCTGAAATTATTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCGGTGTCCTCTACAACAACAAGAATTACAGTATCTGGTGAACGAGTTTCTGCATTCCTTCAACCTCCGTTCCTCCGTCTGCCGAATCATATCTCACAACATTCTATCCTTTGCCCAACAGTTCGACATAAATAACGAGTGGGTCAAAATAGAAGCGAACGTCGATCACATAAAGGAGTATTGGACGGAGGCTCCCCCTGAATTAAACCCCATCTCCACCGTCGGAGAGGAAGGTCTTTCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTAGATTGGTTTAGTGAAGAAGAAGAAGAAGAAATTGGAGACTGCTGCGTTTGCTGTGAAGAGATGAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCGTGCCCATTGTGTAGAGCAGCGTTAGAACCATGA

mRNA sequence

CTCTGTTTCATCTGACACCACCCTACAATTCAATCTCATTTTCAACCGTTACTCTGCTTCCATCATCATCATCCATGTCTTTCTCCGCTACTTCGTGCCTTGAATGTTCTTTCTCCGGCTATCCAAACACCGATCAAACCCTCATTGTTCGATTTGGGTCTTGTAGCCGCCTGATTTCCCAGTCTCCTTCTCCTGAAATTATTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCGGTGTCCTCTACAACAACAAGAATTACAGTATCTGGTGAACGAGTTTCTGCATTCCTTCAACCTCCGTTCCTCCGTCTGCCGAATCATATCTCACAACATTCTATCCTTTGCCCAACAGTTCGACATAAATAACGAGTGGGTCAAAATAGAAGCGAACGTCGATCACATAAAGGAGTATTGGACGGAGGCTCCCCCTGAATTAAACCCCATCTCCACCGTCGGAGAGGAAGGTCTTTCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTAGATTGGTTTAGTGAAGAAGAAGAAGAAGAAATTGGAGACTGCTGCGTTTGCTGTGAAGAGATGAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCGTGCCCATTGTGTAGAGCAGCGTTAGAACCATGA

Coding sequence (CDS)

ATGTCTTTCTCCGCTACTTCGTGCCTTGAATGTTCTTTCTCCGGCTATCCAAACACCGATCAAACCCTCATTGTTCGATTTGGGTCTTGTAGCCGCCTGATTTCCCAGTCTCCTTCTCCTGAAATTATTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCGGTGTCCTCTACAACAACAAGAATTACAGTATCTGGTGAACGAGTTTCTGCATTCCTTCAACCTCCGTTCCTCCGTCTGCCGAATCATATCTCACAACATTCTATCCTTTGCCCAACAGTTCGACATAAATAACGAGTGGGTCAAAATAGAAGCGAACGTCGATCACATAAAGGAGTATTGGACGGAGGCTCCCCCTGAATTAAACCCCATCTCCACCGTCGGAGAGGAAGGTCTTTCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTAGATTGGTTTAGTGAAGAAGAAGAAGAAGAAATTGGAGACTGCTGCGTTTGCTGTGAAGAGATGAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCGTGCCCATTGTGTAGAGCAGCGTTAGAACCATGA

Protein sequence

MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEALFSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANVDHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP

Homology

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BLAST of IVF0020363 vs. ExPASy Swiss-Prot
Match: Q6ZSG1 (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-12
Identity = 52/193 (26.94%), Postives = 89/193 (46.11%), Query Frame = 0


Query: 44  PDVILEQTPFTLIGEALFSLSNLRC-PLQQQELQYLVNEFLHSFNLRSSVCRIISHNILS 103
           P  + E T + L  +A  S +  +  P+ Q    YL    +H F   SS  +++ H I +
Sbjct: 153 PRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRN 212

Query: 104 --FAQQFDINNEWVKIEANVDHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERV-- 163
             + Q   +  + +    +   ++E + E       +      G   RGA ++ IER   
Sbjct: 213 YPYPQLHFLALQGLNPSRHTSAVRESYEEL------LQLEDRLGNVTRGAVQNTIERFTF 272

Query: 164 -----KKQKLDWFSEEEEEEIGDC---CVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLE 223
                K++  D   +++E E  D    C  C  M   GE+VRR+PC H++H+ C+ +WL 
Sbjct: 273 PHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLA 332

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BLAST of IVF0020363 vs. ExPASy Swiss-Prot
Match: E9QAU8 (E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.6e-12
Identity = 52/193 (26.94%), Postives = 89/193 (46.11%), Query Frame = 0


Query: 44  PDVILEQTPFTLIGEALFSLSNLRC-PLQQQELQYLVNEFLHSFNLRSSVCRIISHNILS 103
           P  + E T + L  +A  S +  +  P+ Q    YL    +H F   SS  +++ H I +
Sbjct: 154 PRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRN 213

Query: 104 --FAQQFDINNEWVKIEANVDHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERV-- 163
             + Q   +  + +    +   ++E + E       +      G   RGA ++ IER   
Sbjct: 214 YPYPQLHFLALQGLNPSRHTSAVRESYEEL------LQLEDRLGNVTRGAVQNTIERFTF 273

Query: 164 -----KKQKLDWFSEEEEEEIGDC---CVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLE 223
                K++  D   +++E E  D    C  C  M   GE+VRR+PC H++H+ C+ +WL 
Sbjct: 274 PHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLA 333

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BLAST of IVF0020363 vs. ExPASy Swiss-Prot
Match: Q6ZNA4 (E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 148 RGASESAIER------VKKQKLDWFSEEE-----------EEEIGDCCVCCEEMKRKGEE 207
           RGAS+  IER       KK   DWFS+ +           EE+  + C  C  +  +GE+
Sbjct: 895 RGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSILEEGED 954

Query: 208 VRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 224
           VRR+PC H++H+ C+ +WL  +  CP+CR  +E
Sbjct: 955 VRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987

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BLAST of IVF0020363 vs. ExPASy Swiss-Prot
Match: Q99ML9 (E3 ubiquitin-protein ligase Arkadia OS=Mus musculus OX=10090 GN=Rnf111 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 148 RGASESAIER------VKKQKLDWFSEEE-----------EEEIGDCCVCCEEMKRKGEE 207
           RGAS+  IER       KK   DWFS+ +           EE+  + C  C  +  +GE+
Sbjct: 890 RGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSILEEGED 949

Query: 208 VRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 224
           VRR+PC H++H+ C+ +WL  +  CP+CR  +E
Sbjct: 950 VRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 982

[Close]

BLAST of IVF0020363 vs. ExPASy Swiss-Prot
Match: Q90ZT7 (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rnf111-a PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.1e-11
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 148 RGASESAIER------VKKQKLDWFS-----------EEEEEEIGDCCVCCEEMKRKGEE 207
           RGAS+  IER       KK   DWFS           E  EE+  + C  C  +  +GE+
Sbjct: 824 RGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSILEEGED 883

Query: 208 VRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 224
           VRR+PC H++H+ C+ +WL  +  CP+CR  ++
Sbjct: 884 VRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 916

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BLAST of IVF0020363 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.2e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180
           DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

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BLAST of IVF0020363 vs. ExPASy TrEMBL
Match: A0A1S3C5T8 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.2e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180
           DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of IVF0020363 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 196/224 (87.50%), Postives = 206/224 (91.96%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFSATSC++CSFSGYPNTDQTLIVR   CSRLISQS +PEI+PDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           FSLSNL+ PLQQQEL+Y+VNEFL SFNLRSSVCRI+SHNILSFAQQFDINNE  KIE NV
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180
           D+IKEYWTEA PEL PISTVGEEGL PRGASESAIERVKKQK D F  EEEEEIGDC VC
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180

Query: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEE+KRKG EVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of IVF0020363 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.7e-51
Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MS S +S  +CSFS  PNTD  LI RFG  SRL        II D IL+QTP  L+GE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRS--SVCRIISHNILSFAQQFDINNEWVKIEA 120
              SNL  P QQQ +++LVNEFL SFNL S  S  R I   ILSFA QF   +   KIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 NVDHIKEYWTEAPPELNPISTVGEEGLS-----PR--GASESAIERVKKQKLDWFSEEEE 180
           NV+H+++              +GE+G       PR  GA ESAIER++K+K D  +  +E
Sbjct: 215 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLN--KE 274

Query: 181 EEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           EEIGDC VC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 275 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of IVF0020363 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 101/175 (57.71%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 56  IGEALFSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVK 115
           +G+ L   SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       K
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEANVDHIKEYWTEAPPELNPISTVGEEGLS------PRGASESAIER-VKKQKLDWFSE 175
           IEAN+DH+++              +GE+G         RGA ESAIER + KQK D F++
Sbjct: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120

Query: 176 EEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 224
           EEEEEIGDC VC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of IVF0020363 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 463 bits (1192), Expect = 8.02e-165
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180
           DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
           CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of IVF0020363 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 399 bits (1024), Expect = 3.29e-139
Identity = 196/224 (87.50%), Postives = 206/224 (91.96%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFSATSC++CSFSGYPNTDQTLIVR   CSRLISQS +PEI+PDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           FSLSNL+ PLQQQEL+Y+VNEFL SFNLRSSVCRI+SHNILSFAQQFDINNE  KIE NV
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180
           D+IKEYWTEA PEL PISTVGEEGL PRGASESAIERVKKQK D F  EEEEEIGDC VC
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180

Query: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
           CEE+KRKG EVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of IVF0020363 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 276 bits (707), Expect = 8.17e-91
Identity = 144/234 (61.54%), Postives = 170/234 (72.65%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MSFS TS +   F G PN+DQ L VRFG CSRLIS+SPSP IIPD IL+QT  T IGEAL
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120
           F  +N+R   ++  +++LVN FL SFNL SSVC+++S  ILSFAQQFD NN   KIEAN+
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEANI 120

Query: 121 DHIKEYWTEAPPELNPISTVGEEGLSPR-----------GASESAIERVKKQKLDWFSEE 180
           D++KE+W EA   L+P S +GEEG               GA ESAIERV+KQK D F EE
Sbjct: 121 DYMKEFWMEAVSWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKFDGFKEE 180

Query: 181 EEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223
           EE   G+CCVCCE++KRKG EV RIPCGHVYHKSCIL WLE SN+CPLCR +LE
Sbjct: 181 EE--TGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLE 232

[Close]

BLAST of IVF0020363 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (539), Expect = 2.30e-64
Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60
           MS S +S  +CSFS  PNTD  LI RFG  SRLI        I D IL+QTP  L+GE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLI--------IVDQILQQTPSILMGETL 154

Query: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRS--SVCRIISHNILSFAQQFDINNEWVKIEA 120
              SNL  P QQQ +++LVNEFL SFNL S  S  R I   ILSFA QF   +   KIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 NVDHIKEYWTEAPPELNPISTVGEEGLS-----PR--GASESAIERVKKQKLDWFSEEEE 180
           NV+H+++              +GE+G       PR  GA ESAIER++K+K D  ++EEE
Sbjct: 215 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEE 274

Query: 181 EEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
             IGDC VC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 275 --IGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of IVF0020363 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 9.84e-57
Identity = 101/175 (57.71%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 56  IGEALFSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVK 115
           +G+ L   SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       K
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEANVDHIKEYWTEAPPELNPISTVGEEGLSP------RGASESAIER-VKKQKLDWFSE 175
           IEAN+DH+++              +GE+G         RGA ESAIER + KQK D F++
Sbjct: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120

Query: 176 EEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223
           EEEEEIGDC VC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of IVF0020363 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 45/161 (27.95%), Postives = 77/161 (47.83%), Query Frame = 0


Query: 60  LFSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEAN 119
           L S S  R  +   E++ ++     + NLR     +++ +I+  A   DI++ +  +  +
Sbjct: 485 LASTSRGRTRMGASEIRNILEHMRRAGNLRLEDVMLLNQSIMLGAA--DIHDRYRDMRLD 544

Query: 120 VDHIK-EYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCC 179
           VD++  E        +  + T         G +E  I    KQ+    S    +E+  CC
Sbjct: 545 VDNMTYEELLSLEERIGDVCT---------GLNEETISNRLKQQKYKSSTRSSQEVEPCC 604

Query: 180 VCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCR 220
           VC EE K + EE+ R+ CGH +H  CI +WL+  N CP+C+
Sbjct: 605 VCQEEYKEE-EEIGRLECGHDFHSQCIKEWLKQKNLCPICK 633

[Close]

BLAST of IVF0020363 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.3e-11
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 144 GLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKS 203
           G+    AS+S I+ +K   L      E ++   CC  C+E    G+EV  +PC H YH  
Sbjct: 338 GIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSE 397

Query: 204 CILKWLEISNSCPLCRAAL 223
           CI+ WL I N+CP+CR  L
Sbjct: 398 CIVPWLGIRNTCPVCRFEL 416

[Close]

BLAST of IVF0020363 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-11
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 150 ASESAIERVKKQKLDWFSEEEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWL 209
           AS+SAI+ +   K+    +  + E+  C VC +E +  G +V+++PC HV+H+ C+L WL
Sbjct: 191 ASKSAIDALPTVKVT--KDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 250

Query: 210 EISNSCPLCRAAL 223
           E+ NSCP+CR  L
Sbjct: 251 ELHNSCPVCRFEL 260

[Close]

BLAST of IVF0020363 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 144 GLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKS 203
           G   RG S+  IE +  +K  + S    +  G+ CV C+   + GE    +PC HVYH  
Sbjct: 163 GTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSE 222

Query: 204 CILKWLEISNSCPLCRA 221
           CI KWL I+  CP+C +
Sbjct: 223 CISKWLSINKVCPVCNS 239

[Close]

BLAST of IVF0020363 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 144 GLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKS 203
           G   RG S+  IE +  +K  + S    +  G+ CV C+   + GE    +PC HVYH  
Sbjct: 163 GTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSE 222

Query: 204 CILKWLEISNSCPLCRA 221
           CI KWL I+  CP+C +
Sbjct: 223 CISKWLSINKVCPVCNS 239

The following BLAST results are available for this feature:

BLAST of IVF0020363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZSG1	4.3e-12	26.94	E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1	[more]
E9QAU8	5.6e-12	26.94	E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1	[more]
Q6ZNA4	4.7e-11	36.56	E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens OX=9606 GN=RNF111 PE=1 SV=3	[more]
Q99ML9	4.7e-11	36.56	E3 ubiquitin-protein ligase Arkadia OS=Mus musculus OX=10090 GN=Rnf111 PE=1 SV=1	[more]
Q90ZT7	8.1e-11	36.56	E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rn...	[more]

BLAST of IVF0020363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSM6	3.2e-127	100.00	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C5T8	3.2e-127	100.00	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1	[more]
A0A0A0LHS2	9.6e-108	87.50	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5A7TNB0	1.7e-51	53.65	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CVT7	2.6e-44	57.71	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of IVF0020363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457277.1	8.02e-165	100.00	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]
XP_004139003.1	3.29e-139	87.50	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
XP_038876917.1	8.17e-91	61.54	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]
KAA0043526.1	2.30e-64	53.65	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_008442291.1	9.84e-57	57.71	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]

BLAST of IVF0020363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45180.1	1.3e-11	27.95	RING/U-box superfamily protein	[more]
AT5G60820.1	6.3e-11	39.24	RING/U-box superfamily protein	[more]
AT3G19950.1	8.3e-11	41.10	RING/U-box superfamily protein	[more]
AT3G63530.1	1.4e-10	37.66	RING/U-box superfamily protein	[more]
AT3G63530.2	1.4e-10	37.66	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..218 e-value: 4.0E-7 score: 39.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..219 e-value: 3.9E-12 score: 46.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..219 score: 12.961374
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 140..224 e-value: 1.9E-20 score: 74.3
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 73..223
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 73..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 176..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020363.2	IVF0020363.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity