IVF0020048 (gene) Melon (IVF77) v1

Overview


Name	IVF0020048
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTERF8
Location	chr10: 4493365 .. 4494491 (+)
RNA-Seq Expression	IVF0020048
Synteny	IVF0020048

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAATTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTCTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACAAATTCATGCGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCTGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATCGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAAAAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGCATGGAAGCCTAGAACTATTACGCGAAAGGTTGATATAATGATTAATGCAGTGAAAGCGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTGCTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGGTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTGTGTTTTTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGGTTTGAAGGTGAAAAATCTCCTCAAGAACAAAAAGATTGCTCTTGCTTGGTGGTTTACGCAAGGGGAGAGAGAATTTGTGCAGAACAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACCAAATCTGTTTCATAG

mRNA sequence

ATGTCCAAAATTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTCTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACAAATTCATGCGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCTGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATCGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAAAAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGCATGGAAGCCTAGAACTATTACGCGAAAGGTTGATATAATGATTAATGCAGTGAAAGCGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTGCTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGGTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTGTGTTTTTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGATTGCTCTTGCTTGGTGGTTTACGCAAGGGGAGAGAGAATTTGTGCAGAACAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACCAAATCTGTTTCATAG

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTCTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACAAATTCATGCGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCTGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATCGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAAAAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGCATGGAAGCCTAGAACTATTACGCGAAAGGTTGATATAATGATTAATGCAGTGAAAGCGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTGCTTATGCAGTTTTTGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAGTAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAAATTATTTAGGTTGTTCAGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTGTGTTTTTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGATTGCTCTTGCTTGGTGGTTTACGCAAGGGGAGAGAGAATTTGTGCAGAACAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACCAAATCTGTTTCATAG

Protein sequence

MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEIALAWWFTQGEREFVQNNVVKHLDEIPNLMDIYRGNDASETKSVS

Homology

[Close]

BLAST of IVF0020048 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.0e-11
Identity = 56/271 (20.66%), Postives = 111/271 (40.96%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWV 128
           + +L   G    +I  +++R P IL  +V++ +KP  E+L+ +G+      + I   P +
Sbjct: 255 VAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHI 314

Query: 129 LGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSR 188
           LG  LD  +KP+   +++    +  + + I +YP ++  DLK  L +   +L S      
Sbjct: 315 LGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCS------ 374

Query: 189 NIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDSTWKKKVTV 248
                I   P  +   ++ M   V                       S+S+S   K +  
Sbjct: 375 ----AIHLNPEDLGSLIERMPQFV-----------------------SLSESPMLKHIDF 434

Query: 249 MKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPVFFKYSVDK 308
           +   G+S  +        P  L  +   M+   ++     K     ++ +P FF Y ++ 
Sbjct: 435 LTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLES 492

Query: 309 RLRPRYKV-----LEIALAWWFTQGEREFVQ 335
            ++PR+K      ++ +LAW     + +F Q
Sbjct: 495 TVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQ 492

[Close]

BLAST of IVF0020048 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10
Identity = 56/252 (22.22%), Postives = 111/252 (44.05%), Query Frame = 0


Query: 71  FLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLG 130
           +L   G    QI  +  +  +     +   +KP  EFL ++G+    +P  +   P + G
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 131 SSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNI 190
            SL   LKP+  F++ +     Q    I R+P++L    +  L S ++ L+  G+    I
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQI 321

Query: 191 ARMIAWKPRTITRKV-DIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDSTWKKKVT-- 250
            R++   P  ++  V D +   ++  + L ++    +        LS+  +   K VT  
Sbjct: 322 GRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNL--KPVTEF 381

Query: 251 -VMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPVFFKYSV 310
            + K  G  E  I  + +    Y    ++ +    D+ F T       ++ +P FF YS+
Sbjct: 382 FLEKGFGLDEIGIMIS-RYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSL 441

Query: 311 DKRLRPRYKVLE 319
            +R++PRY++++
Sbjct: 442 QERIKPRYELVQ 448

[Close]

BLAST of IVF0020048 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.7e-06
Identity = 28/131 (21.37%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWV 128
           I++LK  G    ++  L++ +P ++   + +  KP  ++   +G+    + + ++  P +
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPIL 415

Query: 129 LGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKS-NIDILASEGVPS 188
               L+  + P   F++E+   +E +   + ++PSLL   L   ++   I +L   GV  
Sbjct: 416 YCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQ 475

Query: 189 RNIARMIAWKP 199
           ++I ++IA  P
Sbjct: 476 KDIGKVIAMDP 486

[Close]

BLAST of IVF0020048 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 4.8e-05
Identity = 40/143 (27.97%), Postives = 65/143 (45.45%), Query Frame = 0


Query: 67  AVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFL-QEIGLVGPLLPKFILST 126
           +V   L S G     +  ++   P +L S     + P   FL  EI +    +PK I   
Sbjct: 67  SVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRC 126

Query: 127 PWVLGSSLDSQLKPSFFFIKEI-LESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASE- 186
           P +L SS+D QL+P+  F+K +     + +T+   R   LLV +++  L   I+ L    
Sbjct: 127 PRLLISSVDYQLRPALTFLKTLGFVGRDTITS---RNTVLLVSNVERTLIPKIEYLEEGL 186

Query: 187 GVPSRNIARMIAWKPRTITRKVD 207
           G     +A+M+   P  +T  VD
Sbjct: 187 GFTREEVAKMVVRSPALLTYSVD 206

[Close]

BLAST of IVF0020048 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-04
Identity = 35/148 (23.65%), Postives = 62/148 (41.89%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKNTQQ-----YGAVIDFL-KSHGFENTQIANLV 92
           TI++L    G+     T  G+ +Q   +   Q     +     FL K  G     +  +V
Sbjct: 294 TIRYLIEEVGIKE---TDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMV 353

Query: 93  SRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSQLKPSFFFIKE 152
            + P +L   +     PR  FL+ IG+    + K + S   VL  SL+  LKP + ++  
Sbjct: 354 KKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVN 413

Query: 153 ILESDEQVTAAICRYPSLLVCDLKGNLK 175
            L ++  +   + +YP  L   L   ++
Sbjct: 414 ELNNEVHI---LTKYPMYLSLSLDQRIR 435

[Close]

BLAST of IVF0020048 vs. ExPASy TrEMBL
Match: A0A5A7SYC3 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003050 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 1.9e-201
Identity = 363/375 (96.80%), Postives = 363/375 (96.80%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV
Sbjct: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKYSVDKRLRPRYKVLE------------IALAWWFTQGEREFVQNNVVKHLDEIPNLM 360
           FFKYSVDKRLRPRYKVLE            IALAWWFTQGEREFVQNNVVKHLDEIPNLM
Sbjct: 301 FFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFVQNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 364
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of IVF0020048 vs. ExPASy TrEMBL
Match: A0A5A7SY07 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002660 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 332/375 (88.53%), Postives = 341/375 (90.93%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF Q R  NTVSTSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDS+LKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIARMI WKPRTITRKVD MINAVK VKELGIEPKA MF YAV VRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+TVMKSLGWSEKEIFTAFKKDP YL CSE+KMRDVADFCFNTAKLDPGTVISYP+
Sbjct: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300

Query: 301 FFKYSVDKRLRPRYKVLE------------IALAWWFTQGEREFVQNNVVKHLDEIPNLM 360
           FFK SVDKRLR RYKVLE            I L  WF QGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 364
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of IVF0020048 vs. ExPASy TrEMBL
Match: A0A5D3CV65 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003110 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.5e-163
Identity = 299/372 (80.38%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MS++SSSFLLHF QNR LNT+STSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDSQLKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVD M  AVK VKELGIEPKARMF YAV +RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSEKEIF AFK+ PNYLGCSEKK+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKYSVDKRLRPRYKVLEI----------ALAWWFTQGEREFVQNNVVKHLDEIPNLMDI 360
            F+ S++KRL  RYKVLE+           +A  F QGE+ FV+  VVKHLDEIPNLMDI
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNDASETKSV 363
           YRGN  ++TKSV
Sbjct: 361 YRGNVEAKTKSV 372

[Close]

BLAST of IVF0020048 vs. ExPASy TrEMBL
Match: A0A1S3BDU9 (transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488808 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.5e-163
Identity = 299/372 (80.38%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MS++SSSFLLHF QNR LNT+STSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDSQLKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVD M  AVK VKELGIEPKARMF YAV +RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSEKEIF AFK+ PNYLGCSEKK+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKYSVDKRLRPRYKVLEI----------ALAWWFTQGEREFVQNNVVKHLDEIPNLMDI 360
            F+ S++KRL  RYKVLE+           +A  F QGE+ FV+  VVKHLDEIPNLMDI
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNDASETKSV 363
           YRGN  ++TKSV
Sbjct: 361 YRGNVEAKTKSV 372

[Close]

BLAST of IVF0020048 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 6.5e-162
Identity = 295/373 (79.09%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKISSSFLLHFF NR LNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           + QQYGAVIDFLKSHGFENTQIANLVS+RPSILQSKVS NLKPRFEF QEIG +GPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDSQLKPSFFF+K+ILESDEQVTAAICR+PSLLV DLKGNLKSNID+L
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIA+MI   PRT+ +KVD MI  VK VKELGIEPK R F +A+ +R S+SDS
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSE EI TAFKKDPNYL CSE+K+RDV DFC NTAKLDP TVISYP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 FFKYSVDKRLRPRYKVLE-----------IALAWWFTQGEREFVQNNVVKHLDEIPNLMD 360
            F  ++DKRLRPR+K+LE           I +     +GEREFV+  VVKHLD+IPNLMD
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNDASETKSV 363
           IYRGN A+ETKSV
Sbjct: 361 IYRGNVATETKSV 373

[Close]

BLAST of IVF0020048 vs. NCBI nr
Match: KAA0034119.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 709 bits (1830), Expect = 3.33e-257
Identity = 363/375 (96.80%), Postives = 363/375 (96.80%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV
Sbjct: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKYSVDKRLRPRYKVLE------------IALAWWFTQGEREFVQNNVVKHLDEIPNLM 360
           FFKYSVDKRLRPRYKVLE            IALAWWFTQGEREFVQNNVVKHLDEIPNLM
Sbjct: 301 FFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFVQNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 363
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of IVF0020048 vs. NCBI nr
Match: KAA0034157.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 646 bits (1667), Expect = 2.29e-232
Identity = 332/375 (88.53%), Postives = 341/375 (90.93%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF Q R  NTVSTSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDS+LKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIARMI WKPRTITRKVD MINAVK VKELGIEPKA MF YAV VRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+TVMKSLGWSEKEIFTAFKKDP YL CSE+KMRDVADFCFNTAKLDPGTVISYP+
Sbjct: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300

Query: 301 FFKYSVDKRLRPRYKVLE------------IALAWWFTQGEREFVQNNVVKHLDEIPNLM 360
           FFK SVDKRLR RYKVLE            I L  WF QGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 363
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of IVF0020048 vs. NCBI nr
Match: XP_008445929.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0034114.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15807.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 583 bits (1503), Expect = 2.02e-207
Identity = 299/372 (80.38%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MS++SSSFLLHF QNR LNT+STSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDSQLKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVD M  AVK VKELGIEPKARMF YAV +RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSEKEIF AFK+ PNYLGCSEKK+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKYSVDKRLRPRYKVLEIA----------LAWWFTQGEREFVQNNVVKHLDEIPNLMDI 360
            F+ S++KRL  RYKVLE+           +A  F QGE+ FV+  VVKHLDEIPNLMDI
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNDASETKSV 362
           YRGN  ++TKSV
Sbjct: 361 YRGNVEAKTKSV 372

[Close]

BLAST of IVF0020048 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 578 bits (1489), Expect = 2.84e-205
Identity = 295/373 (79.09%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKISSSFLLHFF NR LNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           + QQYGAVIDFLKSHGFENTQIANLVS+RPSILQSKVS NLKPRFEF QEIG +GPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDSQLKPSFFF+K+ILESDEQVTAAICR+PSLLV DLKGNLKSNID+L
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
           ASEGVPSRNIA+MI   PRT+ +KVD MI  VK VKELGIEPK R F +A+ +R S+SDS
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSE EI TAFKKDPNYL CSE+K+RDV DFC NTAKLDP TVISYP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 FFKYSVDKRLRPRYKVLE-----------IALAWWFTQGEREFVQNNVVKHLDEIPNLMD 360
            F  ++DKRLRPR+K+LE           I +     +GEREFV+  VVKHLD+IPNLMD
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNDASETKSV 362
           IYRGN A+ETKSV
Sbjct: 361 IYRGNVATETKSV 373

[Close]

BLAST of IVF0020048 vs. NCBI nr
Match: TYK15787.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 568 bits (1465), Expect = 1.33e-201
Identity = 295/375 (78.67%), Postives = 319/375 (85.07%), Query Frame = 0


Query: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKISSSFLLHFF NR LNT+ TSTLPL SVSTIQFLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIA LVSR+PSILQS+VS NLKP+FEFLQEIG VGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            I+S+P +L  SLDS+LKPSF  +KE+L SDE+VTAAICR   LL  D KG +KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240
            SEGVPSRNIA+MIAW PRTI ++VD MI  VK VKELGIEPKA MF  AV VRL MSDS
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 240

Query: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300
           TWKKK+ VMKSLGWSEKEI TAFK+ P  L CSE+KMRDVADFCFNTAKLDPGT+IS PV
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 300

Query: 301 FFKYSVDKRLRPRYKVLE------------IALAWWFTQGEREFVQNNVVKHLDEIPNLM 360
           FFK SV+KRLRPRYKVLE            IALAWWF QGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 363
           DIYRGNDASET+SVS
Sbjct: 361 DIYRGNDASETQSVS 375

[Close]

BLAST of IVF0020048 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-46
Identity = 108/333 (32.43%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSI 92
           T+ +L +SCGLS  S T A RKL  D  + ++   V++ L+ HGF   QI++LV +RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSQLKPSFFFIKEILESDE 152
           L +     L P+  F   IG+   LL + + S P +L  SL +QL PS+ F+K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIAWKPRTITRKVDIMINAV 212
           ++ AA+ R   + + D   NL  NI+ +A  GVP + I  ++   P  + +K        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KAVKELGIEPKARMFAYAVFVRLSMSD-STWKKKVTVMKSLGWSEKEIFTAFKKDPNYLG 272
           K  +E+G  P+   F  A+       + S W K   V +  GWSE +I  AFKK P+ + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEKKMRDVADFCFNTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEIALA-------WW 332
            SE+K+    ++  N   + P ++   PV   +S++KR+ PR  V ++ ++       W 
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 FTQ----GEREFVQNNVVKHLDEIPNLMDIYRG 354
            T      E+ F++  V+K+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of IVF0020048 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-30
Identity = 84/334 (25.15%), Postives = 153/334 (45.81%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSI 92
           T+ +L +SCGLS  S  S  R ++    ++++  +V+   K HGF N QI +++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSQLKPSFFFIKEILESDE 152
           L       + P+  F   IG       K I S+P +L  SL  +L P +  +K IL  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 QVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIAWKPRTITRKVDIMINAV 212
            V   + R        +   +   + I    GVP ++I  ++   P T   +       +
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KAVKELGIEPKARMFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGC 272
             V   G +PK   F +A+      S+S  ++K  + +  GWS+++   A  + PN +  
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEKKMRDVADFCFNTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEIALAWWFTQGE--- 332
           S++K+    ++  N   L    +++ PV    S++KR++PR +V+ + L+    + E   
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 ---------REFVQNNVVKHLDEIPNLMDIYRGN 355
                     EF+   V+K+ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of IVF0020048 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 79/263 (30.04%), Postives = 129/263 (49.05%), Query Frame = 0


Query: 60  KNTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLP 119
           K+ +Q  +VI  LKS+ F +TQI   +   P ++   V K L+P+  F ++IG  G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KFILSTPWVLGSSLDSQLKPSFFFIKEIL---ESDEQVTAAICRYPSLLVCDLKGNLKSN 179
           KF+     V+G SL  +L P+   +K I+     D  V  + C +  LL  D    L  N
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGW-LLLSRDPNLFLLPN 185

Query: 180 IDILASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLS 239
           I  L + G+    +A ++  +PR      + +   V    +LG    +RM  +AV    S
Sbjct: 186 ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSS 245

Query: 240 MSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVI 299
           +S+ T+ +KV +  + G+SE EI    ++ P  + CSE K+    +F      L+   + 
Sbjct: 246 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALA 305

Query: 300 SYPVFFKYSVDKRLRPRYKVLEI 320
             P    Y+++KR+ PR KVL+I
Sbjct: 306 KRPCVLSYNLEKRVIPRLKVLQI 327

[Close]

BLAST of IVF0020048 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-26
Identity = 108/411 (26.28%), Postives = 172/411 (41.85%), Query Frame = 0


Query: 10  LHFFQNRSL--NTVSTSTLPLPSVS---------TIQFLTNSCGLSSGSPTSAGRKLQFD 69
           ++ FQN S   NT S+S +     S         T+ +L +S GL++    S   K+ FD
Sbjct: 24  VNLFQNGSAFSNTFSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFD 83

Query: 70  EKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLL 129
            K      +V+  L+SHGF ++QI+N++   P +L     K+L P+ +FLQ IG     L
Sbjct: 84  NKGNPD--SVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSEL 143

Query: 130 PKFILSTPWVLGSSLDSQLKPSFFFIKEILESDE-QVTAAICRYPSLLVCDLKGNLKSNI 189
            + + + P +LG      L   + F+K I+E+D+      +C   SL     + N   N+
Sbjct: 144 TETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSSKLEKLCH--SLPEGSKQENKIRNL 203

Query: 190 DILASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSM 249
            +L   GVP R +  ++      +  K     +  KAV E+G +P    F  A+ V   +
Sbjct: 204 LVLREMGVPQRLLFSLLISDAGDVCGKEKFKESLKKAV-EIGFDPTTATFVKALNVLYGL 263

Query: 250 SDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKK--------------------- 309
           SD   + K    K LG +  +++  FKK PN L  SEKK                     
Sbjct: 264 SDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMM 323

Query: 310 --------------MRDVADFCFNTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEIALA 360
                         M+   +F           V S P    YS++KR  PR  V+++ ++
Sbjct: 324 VKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLIS 383

[Close]

BLAST of IVF0020048 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-25
Identity = 70/259 (27.03%), Postives = 137/259 (52.90%), Query Frame = 0


Query: 19  NTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFE 78
           +T++  + P  S  T+ +L  S GL+     +  +K+ F++K      +V++ L+S+GF+
Sbjct: 40  STIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPD--SVLNLLRSNGFK 99

Query: 79  NTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSQLK 138
           ++QI+ ++   P +L +   K+L+P+ +FL+  G     + + + + P +L    +  + 
Sbjct: 100 DSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVS 159

Query: 139 PSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIAWKP 198
             + F+K+I++  + +  +            KGN   NI +L   GVP + +  ++  + 
Sbjct: 160 LYYDFVKDIMQDGKSLCISCPE-------GKKGNRIRNISVLRELGVPQKLLFSLLISRY 219

Query: 199 RTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKE 258
           + +  K +    ++K V ++G +P    F  A+ V   MS+ T ++KV V K LG+SE E
Sbjct: 220 QPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAE 279

Query: 259 IFTAFKKDPNYLGCSEKKM 278
           I+  FKK P +L  SEKK+
Sbjct: 280 IWAIFKKWPYFLKFSEKKI 288

The following BLAST results are available for this feature:

BLAST of IVF0020048 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	2.0e-11	20.66	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	1.3e-10	22.22	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	9.7e-06	21.37	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	4.8e-05	27.97	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	4.1e-04	23.65	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of IVF0020048 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYC3	1.9e-201	96.80	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SY07	1.5e-182	88.53	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CV65	1.5e-163	80.38	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDU9	1.5e-163	80.38	transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5D3CWR8	6.5e-162	79.09	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of IVF0020048 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034119.1	3.33e-257	96.80	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 t...	[more]
KAA0034157.1	2.29e-232	88.53	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 t...	[more]
XP_008445929.1	2.02e-207	80.38	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]
XP_008445932.1	2.84e-205	79.09	PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra...	[more]
TYK15787.1	1.33e-201	78.67	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0020048 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.5e-46	32.43	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.6e-30	25.15	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.7e-26	30.04	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	6.6e-26	26.28	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	3.3e-25	27.03	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 260..291 e-value: 360.0 score: 7.3 coord: 191..221 e-value: 700.0 score: 5.1 coord: 119..150 e-value: 0.58 score: 19.2 coord: 155..186 e-value: 0.28 score: 20.3 coord: 292..324 e-value: 150.0 score: 10.4 coord: 83..114 e-value: 8.2E-5 score: 32.0 coord: 224..255 e-value: 490.0 score: 6.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 229..317 e-value: 6.8E-15 score: 54.8 coord: 69..221 e-value: 1.4E-23 score: 83.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 17..355
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 133..345 e-value: 1.3E-40 score: 141.2
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 17..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020048.2	IVF0020048.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding