IVF0020028 (gene) Melon (IVF77) v1

Overview


Name	IVF0020028
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription factor MYB98
Location	chr09: 3652364 .. 3652837 (+)
RNA-Seq Expression	IVF0020028
Synteny	IVF0020028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAGACACATGGAGTGAAGAGGAAGACAGAATACTAATTGAAGCTCATAAAGACATTGGAAATCGATGGGCGGAGATTGCCCGGAGGCTACCCGGCCGCACGGAAAACACCATCAAAAACCACTGGAACGCCACAAAACGCCGTCAAAATTCCAAGAAATTCAAAGCCAGAGACGCCGATTCCATCAATAATAACAACAACAATCCCAACGGCGGCGGCGGCTCCATCCTTCAAAATTACATTAAAACCCTCACCGCTGCCGAAGAACCGAACCAAATCCCGGACTCGCTGCCGCAGCTGGTGGACACACACAGCCCTGCCCCCGACGACGGTGGTGGGTATTGCTTCGGGTTCGGAATGGGATCTGGATCGGGATCGGAGTTGGAGTGTTTGAATCTGTTGCAACAAAACGATGCAATGAAATCGGAGATGGATCTGCTGGAGCTGATTTGTCAGGGGAATCTTTAA

mRNA sequence

ATGCAGAAAGACACATGGAGTGAAGAGGAAGACAGAATACTAATTGAAGCTCATAAAGACATTGGAAATCGATGGGCGGAGATTGCCCGGAGGCTACCCGGCCGCACGGAAAACACCATCAAAAACCACTGGAACGCCACAAAACGCCGTCAAAATTCCAAGAAATTCAAAGCCAGAGACGCCGATTCCATCAATAATAACAACAACAATCCCAACGGCGGCGGCGGCTCCATCCTTCAAAATTACATTAAAACCCTCACCGCTGCCGAAGAACCGAACCAAATCCCGGACTCGCTGCCGCAGCTGGTGGACACACACAGCCCTGCCCCCGACGACGGTGGTGGGTATTGCTTCGGGTTCGGAATGGGATCTGGATCGGGATCGGAGTTGGAGTGTTTGAATCTGTTGCAACAAAACGATGCAATGAAATCGGAGATGGATCTGCTGGAGCTGATTTGTCAGGGGAATCTTTAA

Coding sequence (CDS)

ATGCAGAAAGACACATGGAGTGAAGAGGAAGACAGAATACTAATTGAAGCTCATAAAGACATTGGAAATCGATGGGCGGAGATTGCCCGGAGGCTACCCGGCCGCACGGAAAACACCATCAAAAACCACTGGAACGCCACAAAACGCCGTCAAAATTCCAAGAAATTCAAAGCCAGAGACGCCGATTCCATCAATAATAACAACAACAATCCCAACGGCGGCGGCGGCTCCATCCTTCAAAATTACATTAAAACCCTCACCGCTGCCGAAGAACCGAACCAAATCCCGGACTCGCTGCCGCAGCTGGTGGACACACACAGCCCTGCCCCCGACGACGGTGGTGGGTATTGCTTCGGGTTCGGAATGGGATCTGGATCGGGATCGGAGTTGGAGTGTTTGAATCTGTTGCAACAAAACGATGCAATGAAATCGGAGATGGATCTGCTGGAGCTGATTTGTCAGGGGAATCTTTAA

Protein sequence

MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARDADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGFGMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL

Homology

[Close]

BLAST of IVF0020028 vs. ExPASy Swiss-Prot
Match: Q9LVW4 (Transcription factor MYB118 OS=Arabidopsis thaliana OX=3702 GN=MYB118 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-23
Identity = 55/92 (59.78%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KD W+EEED ILI+AHK+IGNRWAEIAR+LPGRTENTIKNHWNATKRRQ+S++ K +D
Sbjct: 239 IKKDGWTEEEDIILIKAHKEIGNRWAEIARKLPGRTENTIKNHWNATKRRQHSRRTKGKD 298

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEP 93
             S++  +N         LQNYI+++T  ++P
Sbjct: 299 EISLSLGSNT--------LQNYIRSVTYNDDP 322

[Close]

BLAST of IVF0020028 vs. ExPASy Swiss-Prot
Match: Q9FIM4 (Transcription factor MYB119 OS=Arabidopsis thaliana OX=3702 GN=MYB119 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 50/87 (57.47%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KD WSEEE+R+L+E+H  IGN+WAEIA+ +PGRTEN+IKNHWNATKRRQNSK+   R+
Sbjct: 155 IKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNATKRRQNSKRKHKRE 214

Query: 61  ADSINNNNN-NPNGGGGSILQNYIKTL 87
           +++ NN+ + +P+     ILQ+YIK++
Sbjct: 215 SNADNNDRDASPSAKRPCILQDYIKSI 241

[Close]

BLAST of IVF0020028 vs. ExPASy Swiss-Prot
Match: Q9S7L2 (Transcription factor MYB98 OS=Arabidopsis thaliana OX=3702 GN=MYB98 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.7e-20
Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++K+TWSEEEDR+LIE HK+IGN+WAEIA+RLPGRTEN+IKNHWNATKRRQ SK+ K R 
Sbjct: 267 IKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSKR-KCR- 326

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTL 87
                  +  P     S+LQ+YIK+L
Sbjct: 327 -------SKYPR---PSLLQDYIKSL 340

[Close]

BLAST of IVF0020028 vs. ExPASy Swiss-Prot
Match: Q1PDP9 (Transcription factor MYB115 OS=Arabidopsis thaliana OX=3702 GN=MYB115 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.3e-19
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++K+ WSEEED+ILIE HK +GN+W EIA+RLPGR+EN +KNHWNATKRR +S + K  D
Sbjct: 208 IKKNDWSEEEDQILIEVHKIVGNKWTEIAKRLPGRSENIVKNHWNATKRRLHSVRTKRSD 267

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLT 88
           A S  NN           L+NYI+++T
Sbjct: 268 AFSPRNN----------ALENYIRSIT 284

[Close]

BLAST of IVF0020028 vs. ExPASy Swiss-Prot
Match: Q9FY60 (Transcription factor MYB64 OS=Arabidopsis thaliana OX=3702 GN=MYB64 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.3e-19
Identity = 50/96 (52.08%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKK--FKA 60
           ++KD+WSEEE+R+L+EAH  IGN+WAEIA+ + GRTEN+IKNHWNATKRRQNSK+   ++
Sbjct: 155 IKKDSWSEEEERLLVEAHTRIGNKWAEIAKLIQGRTENSIKNHWNATKRRQNSKRKHKRS 214

Query: 61  RDADSINN-NNNNPNGGGGSILQNYIKTLTAAEEPN 94
           ++ADS ++ ++ +P+     IL++YIK +   ++ N
Sbjct: 215 KNADSNSDIDDLSPSAKRPRILEDYIKNIENNDKNN 250

[Close]

BLAST of IVF0020028 vs. ExPASy TrEMBL
Match: A0A5A7T7L1 (Transcription factor MYB98 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001270 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD
Sbjct: 176 IRKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 235

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF
Sbjct: 236 ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 295

Query: 121 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 158
           GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL
Sbjct: 296 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 332

[Close]

BLAST of IVF0020028 vs. ExPASy TrEMBL
Match: A0A0A0KUF7 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G524690 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFK RD
Sbjct: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKGRD 60

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           ADSINNN +NPNGGGGSILQNYIKTLTA EEPNQ P+SLPQLVDTHSPA +DGGGYCFG+
Sbjct: 61  ADSINNNKSNPNGGGGSILQNYIKTLTAVEEPNQAPESLPQLVDTHSPAAEDGGGYCFGY 120

Query: 121 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 158
           GM SGSGSELECLNLLQQNDAMKSEMDLLELICQGNL
Sbjct: 121 GMESGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 157

[Close]

BLAST of IVF0020028 vs. ExPASy TrEMBL
Match: A0A6J1JX07 (transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111489101 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.9e-55
Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGN+WAEIARRLPGRTENTIKNHWNATKRRQNSKK K RD
Sbjct: 255 IRKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRD 314

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
            DS      NPN   GSILQNYIK++TA +   +I DSLP LVD+HSPA ++GGG+CFGF
Sbjct: 315 IDS------NPN---GSILQNYIKSVTAGD--RKISDSLPLLVDSHSPAAEEGGGFCFGF 374

Query: 121 --GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 158
             G GSGSGS +ECLNL+ QN+ MKSEMDLLELICQGNL
Sbjct: 375 GYGSGSGSGSGMECLNLM-QNEEMKSEMDLLELICQGNL 401

[Close]

BLAST of IVF0020028 vs. ExPASy TrEMBL
Match: A0A6J1FFZ3 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111445358 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 119/159 (74.84%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGN+WAEIARRLPGRTENTIKNHWNATKRRQNSKK K RD
Sbjct: 254 IRKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRD 313

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
            DS      NPN   GS+LQNYIK++TA +   +I DSLP LVD+HSPA ++GGG+CFGF
Sbjct: 314 MDS------NPN---GSMLQNYIKSVTAGD--RKISDSLPLLVDSHSPAAEEGGGFCFGF 373

Query: 121 --GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 158
             G GSGSGS +ECLN L QN+ MKSEMDLLELICQGNL
Sbjct: 374 GYGSGSGSGSGMECLN-LTQNEEMKSEMDLLELICQGNL 400

[Close]

BLAST of IVF0020028 vs. ExPASy TrEMBL
Match: A0A6J1HHA2 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111463472 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 9.9e-51
Identity = 114/163 (69.94%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSE+EDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKK K + 
Sbjct: 283 IRKDTWSEDEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGKY 342

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
            DS +N+         SILQNYI ++TA +   +I DS+PQLVD+HSPA  +GGG+ F F
Sbjct: 343 RDSNSNS---------SILQNYINSVTAGD--RKISDSMPQLVDSHSPAAANGGGFYFEF 402

Query: 121 GMGSGSGS------ELECLNLLQQNDAMKSEMDLLELICQGNL 158
           G GSGSGS      E+ECLNL+ QND MKSEMDLLELICQGNL
Sbjct: 403 GSGSGSGSGSGSGTEMECLNLM-QNDEMKSEMDLLELICQGNL 433

[Close]

BLAST of IVF0020028 vs. NCBI nr
Match: KAA0037537.1 (transcription factor MYB98 [Cucumis melo var. makuwa] >TYK02012.1 transcription factor MYB98 [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (805), Expect = 1.97e-105
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD
Sbjct: 176 IRKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 235

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF
Sbjct: 236 ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 295

Query: 121 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 157
           GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL
Sbjct: 296 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 332

[Close]

BLAST of IVF0020028 vs. NCBI nr
Match: KAE8648558.1 (hypothetical protein Csa_007738 [Cucumis sativus])

HSP 1 Score: 295 bits (754), Expect = 1.29e-97
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFK RD
Sbjct: 181 IRKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKGRD 240

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           ADSINNN +NPNGGGGSILQNYIKTLTA EEPNQ P+SLPQLVDTHSPA +DGGGYCFG+
Sbjct: 241 ADSINNNKSNPNGGGGSILQNYIKTLTAVEEPNQAPESLPQLVDTHSPAAEDGGGYCFGY 300

Query: 121 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 157
           GM SGSGSELECLNLLQQNDAMKSEMDLLELICQGNL
Sbjct: 301 GMESGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 337

[Close]

BLAST of IVF0020028 vs. NCBI nr
Match: XP_004142853.1 (transcription factor MYB98 [Cucumis sativus])

HSP 1 Score: 295 bits (754), Expect = 2.40e-96
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFK RD
Sbjct: 275 IRKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKGRD 334

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           ADSINNN +NPNGGGGSILQNYIKTLTA EEPNQ P+SLPQLVDTHSPA +DGGGYCFG+
Sbjct: 335 ADSINNNKSNPNGGGGSILQNYIKTLTAVEEPNQAPESLPQLVDTHSPAAEDGGGYCFGY 394

Query: 121 GMGSGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 157
           GM SGSGSELECLNLLQQNDAMKSEMDLLELICQGNL
Sbjct: 395 GMESGSGSELECLNLLQQNDAMKSEMDLLELICQGNL 431

[Close]

BLAST of IVF0020028 vs. NCBI nr
Match: XP_023551525.1 (transcription factor MYB118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (572), Expect = 1.25e-72
Identity = 120/159 (75.47%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           +QKDTWSEEEDRILIEAHKDIGN+WAEIARRLPGRTENTIKNHWNATKRRQNSKK K RD
Sbjct: 3   VQKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRD 62

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
           +DS      NPNG   S+LQNYIK++TA +   +I DSLP LVD+HSPA ++GGG+CFGF
Sbjct: 63  SDS------NPNG---SMLQNYIKSVTAGDR--KISDSLPLLVDSHSPAAEEGGGFCFGF 122

Query: 121 GMGSGSGSE--LECLNLLQQNDAMKSEMDLLELICQGNL 157
           G GSGSGS   +ECLNL+Q N+ MKSEMDLLELICQGNL
Sbjct: 123 GYGSGSGSGSGMECLNLMQ-NEEMKSEMDLLELICQGNL 149

[Close]

BLAST of IVF0020028 vs. NCBI nr
Match: XP_022992905.1 (transcription factor MYB118-like [Cucurbita maxima])

HSP 1 Score: 223 bits (569), Expect = 8.22e-69
Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KDTWSEEEDRILIEAHKDIGN+WAEIARRLPGRTENTIKNHWNATKRRQNSKK K RD
Sbjct: 255 IRKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRD 314

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEPNQIPDSLPQLVDTHSPAPDDGGGYCFGF 120
            DS      NPNG   SILQNYIK++TA +   +I DSLP LVD+HSPA ++GGG+CFGF
Sbjct: 315 IDS------NPNG---SILQNYIKSVTAGDR--KISDSLPLLVDSHSPAAEEGGGFCFGF 374

Query: 121 GMGSGSGSE--LECLNLLQQNDAMKSEMDLLELICQGNL 157
           G GSGSGS   +ECLNL+Q N+ MKSEMDLLELICQGNL
Sbjct: 375 GYGSGSGSGSGMECLNLMQ-NEEMKSEMDLLELICQGNL 401

[Close]

BLAST of IVF0020028 vs. TAIR 10
Match: AT3G27785.1 (myb domain protein 118 )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 55/92 (59.78%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KD W+EEED ILI+AHK+IGNRWAEIAR+LPGRTENTIKNHWNATKRRQ+S++ K +D
Sbjct: 239 IKKDGWTEEEDIILIKAHKEIGNRWAEIARKLPGRTENTIKNHWNATKRRQHSRRTKGKD 298

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLTAAEEP 93
             S++  +N         LQNYI+++T  ++P
Sbjct: 299 EISLSLGSNT--------LQNYIRSVTYNDDP 322

[Close]

BLAST of IVF0020028 vs. TAIR 10
Match: AT5G58850.1 (myb domain protein 119 )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 50/87 (57.47%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++KD WSEEE+R+L+E+H  IGN+WAEIA+ +PGRTEN+IKNHWNATKRRQNSK+   R+
Sbjct: 155 IKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNATKRRQNSKRKHKRE 214

Query: 61  ADSINNNNN-NPNGGGGSILQNYIKTL 87
           +++ NN+ + +P+     ILQ+YIK++
Sbjct: 215 SNADNNDRDASPSAKRPCILQDYIKSI 241

[Close]

BLAST of IVF0020028 vs. TAIR 10
Match: AT4G18770.1 (myb domain protein 98 )

HSP 1 Score: 98.2 bits (243), Expect = 6.2e-21
Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++K+TWSEEEDR+LIE HK+IGN+WAEIA+RLPGRTEN+IKNHWNATKRRQ SK+ K R 
Sbjct: 267 IKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSKR-KCR- 326

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTL 87
                  +  P     S+LQ+YIK+L
Sbjct: 327 -------SKYPR---PSLLQDYIKSL 340

[Close]

BLAST of IVF0020028 vs. TAIR 10
Match: AT5G40360.1 (myb domain protein 115 )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKKFKARD 60
           ++K+ WSEEED+ILIE HK +GN+W EIA+RLPGR+EN +KNHWNATKRR +S + K  D
Sbjct: 208 IKKNDWSEEEDQILIEVHKIVGNKWTEIAKRLPGRSENIVKNHWNATKRRLHSVRTKRSD 267

Query: 61  ADSINNNNNNPNGGGGSILQNYIKTLT 88
           A S  NN           L+NYI+++T
Sbjct: 268 AFSPRNN----------ALENYIRSIT 284

[Close]

BLAST of IVF0020028 vs. TAIR 10
Match: AT5G11050.1 (myb domain protein 64 )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 50/96 (52.08%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1   MQKDTWSEEEDRILIEAHKDIGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKK--FKA 60
           ++KD+WSEEE+R+L+EAH  IGN+WAEIA+ + GRTEN+IKNHWNATKRRQNSK+   ++
Sbjct: 155 IKKDSWSEEEERLLVEAHTRIGNKWAEIAKLIQGRTENSIKNHWNATKRRQNSKRKHKRS 214

Query: 61  RDADSINN-NNNNPNGGGGSILQNYIKTLTAAEEPN 94
           ++ADS ++ ++ +P+     IL++YIK +   ++ N
Sbjct: 215 KNADSNSDIDDLSPSAKRPRILEDYIKNIENNDKNN 250

The following BLAST results are available for this feature:

BLAST of IVF0020028 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVW4	2.9e-23	59.78	Transcription factor MYB118 OS=Arabidopsis thaliana OX=3702 GN=MYB118 PE=2 SV=1	[more]
Q9FIM4	2.7e-21	57.47	Transcription factor MYB119 OS=Arabidopsis thaliana OX=3702 GN=MYB119 PE=2 SV=1	[more]
Q9S7L2	8.7e-20	62.79	Transcription factor MYB98 OS=Arabidopsis thaliana OX=3702 GN=MYB98 PE=2 SV=1	[more]
Q1PDP9	4.3e-19	55.17	Transcription factor MYB115 OS=Arabidopsis thaliana OX=3702 GN=MYB115 PE=2 SV=1	[more]
Q9FY60	4.3e-19	52.08	Transcription factor MYB64 OS=Arabidopsis thaliana OX=3702 GN=MYB64 PE=2 SV=1	[more]

BLAST of IVF0020028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7L1	1.3e-82	98.73	Transcription factor MYB98 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0KUF7	1.2e-77	93.63	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G52469...	[more]
A0A6J1JX07	3.9e-55	75.47	transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111489101 PE=...	[more]
A0A6J1FFZ3	1.9e-54	74.84	transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111445358 P...	[more]
A0A6J1HHA2	9.9e-51	69.94	transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111463472 P...	[more]

BLAST of IVF0020028 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037537.1	1.97e-105	98.73	transcription factor MYB98 [Cucumis melo var. makuwa] >TYK02012.1 transcription ...	[more]
KAE8648558.1	1.29e-97	92.36	hypothetical protein Csa_007738 [Cucumis sativus]	[more]
XP_004142853.1	2.40e-96	92.36	transcription factor MYB98 [Cucumis sativus]	[more]
XP_023551525.1	1.25e-72	75.47	transcription factor MYB118-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992905.1	8.22e-69	75.47	transcription factor MYB118-like [Cucurbita maxima]	[more]

BLAST of IVF0020028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27785.1	2.1e-24	59.78	myb domain protein 118	[more]
AT5G58850.1	1.9e-22	57.47	myb domain protein 119	[more]
AT4G18770.1	6.2e-21	62.79	myb domain protein 98	[more]
AT5G40360.1	3.1e-20	55.17	myb domain protein 115	[more]
AT5G11050.1	3.1e-20	52.08	myb domain protein 64	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 2..50 e-value: 2.3E-16 score: 70.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..48 score: 10.847389
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 5..48 e-value: 1.07503E-13 score: 59.8966
None	No IPR available	GENE3D	1.10.10.60		coord: 5..69 e-value: 2.2E-19 score: 71.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..78
None	No IPR available	PANTHER	PTHR45614:SF38	MYB DOMAIN PROTEIN 100-RELATED	coord: 4..72
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 4..72
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 4..45 e-value: 4.0E-16 score: 58.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..52 score: 23.954588
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 3..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020028.1	IVF0020028.1	mRNA