IVF0019873 (gene) Melon (IVF77) v1

Overview
NameIVF0019873
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPlant transposase
Locationchr02: 3611728 .. 3612077 (+)
RNA-Seq ExpressionIVF0019873
SyntenyIVF0019873
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGATTGTGGAGAGCTGAAAAATCACGAATGGTGAAACAAATTCAATCAACCTCCAACAATGAAGAGCTTAGTAAAATGAAGTCGTCCAATATACAATCTATGCAAGATTGGATGGACTTTTTGAAAGAAAAGAAGAGTGCACGGTTCAAGGTAAGTCAATGTGGCCATTTCCTTTAAAAGATACATATAAGTACAATTTATATCTGATGATTAATCCATTTGTGTTTGATTAGGCTGTAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAATTTCCACATACATGTAGCTGTAAAGGTTATGTTCGACTGGCGGAAGATATGGTATTCATTACTCTAAAGTAA

mRNA sequence

ATGGGAAGATTGTGGAGAGCTGAAAAATCACGAATGGTGAAACAAATTCAATCAACCTCCAACAATGAAGAGCTTAGTAAAATGAAGTCGTCCAATATACAATCTATGCAAGATTGGATGGACTTTTTGAAAGAAAAGAAGAGTGCACGGTTCAAGGCTGTAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAATTTCCACATACATGTAGCTGTAAAGGTTATGTTCGACTGGCGGAAGATATGGTATTCATTACTCTAAAGTAA

Coding sequence (CDS)

ATGGGAAGATTGTGGAGAGCTGAAAAATCACGAATGGTGAAACAAATTCAATCAACCTCCAACAATGAAGAGCTTAGTAAAATGAAGTCGTCCAATATACAATCTATGCAAGATTGGATGGACTTTTTGAAAGAAAAGAAGAGTGCACGGTTCAAGGCTGTAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAATTTCCACATACATGTAGCTGTAAAGGTTATGTTCGACTGGCGGAAGATATGGTATTCATTACTCTAAAGTAA

Protein sequence

MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCSCKGYVRLAEDMVFITLK
Homology
BLAST of IVF0019873 vs. ExPASy TrEMBL
Match: A0A5A7U5B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00120 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-31
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0

Query: 1   MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
           MGRLWR  KSRMVKQIQSTSNN+ELSKMKSSNIQS QDWMDF+KEKKSARFKA SAKFKS
Sbjct: 139 MGRLWRVGKSRMVKQIQSTSNNKELSKMKSSNIQSTQDWMDFVKEKKSARFKAESAKFKS 198

Query: 61  MKKRQFPHTCSCKGYVRLAEDM 83
           MKKRQ PHTCSCKGY RLAED+
Sbjct: 199 MKKRQLPHTCSCKGYARLAEDL 220

BLAST of IVF0019873 vs. ExPASy TrEMBL
Match: A0A5D3CF98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00080 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.2e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 12 MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 71
          MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 60

Query: 72 CKGYVRLAEDM 83
          CKGYVRLAEDM
Sbjct: 61 CKGYVRLAEDM 71

BLAST of IVF0019873 vs. ExPASy TrEMBL
Match: A0A5A7U615 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00240 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28
Identity = 71/82 (86.59%), Postives = 73/82 (89.02%), Query Frame = 0

Query: 1  MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
          MGRLWRA KSRMVK+IQSTSN EELSKMK SNIQS QDWMDF+KEKK ARFKA SAKFKS
Sbjct: 1  MGRLWRAGKSRMVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKS 60

Query: 61 MKKRQFPHTCSCKGYVRLAEDM 83
          MKKRQ PHTCS KGY RLAEDM
Sbjct: 61 MKKRQLPHTCSRKGYARLAEDM 82

BLAST of IVF0019873 vs. ExPASy TrEMBL
Match: A0A5D3C765 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001660 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 68/82 (82.93%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 1  MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
          MGRLWR   SRMVK+IQSTSN EELSKMK SNIQS Q WMDF+KEKK ARFKA SAKFKS
Sbjct: 1  MGRLWRVGNSRMVKKIQSTSNYEELSKMKPSNIQSTQYWMDFVKEKKIARFKAESAKFKS 60

Query: 61 MKKRQFPHTCSCKGYVRLAEDM 83
          MKKRQ PHTCS KGY RLAEDM
Sbjct: 61 MKKRQLPHTCSRKGYARLAEDM 82

BLAST of IVF0019873 vs. ExPASy TrEMBL
Match: A0A5D3D4T6 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00530 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.1e-26
Identity = 66/82 (80.49%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 1   MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
           MGRLWRA KSR+V QIQSTS NEEL KMK SNIQSM DWMDF+KEKKSA FKA S KFKS
Sbjct: 589 MGRLWRAGKSRIVSQIQSTSTNEELVKMKPSNIQSMHDWMDFVKEKKSATFKAKSEKFKS 648

Query: 61  MKKRQFPHTCSCKGYVRLAEDM 83
           MKK Q PHTCS KGY RLAE+M
Sbjct: 649 MKKMQLPHTCSRKGYARLAEEM 670

BLAST of IVF0019873 vs. NCBI nr
Match: KAA0050424.1 (uncharacterized protein E6C27_scaffold175G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (362), Expect = 6.85e-40
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0

Query: 1   MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
           MGRLWR  KSRMVKQIQSTSNN+ELSKMKSSNIQS QDWMDF+KEKKSARFKA SAKFKS
Sbjct: 139 MGRLWRVGKSRMVKQIQSTSNNKELSKMKSSNIQSTQDWMDFVKEKKSARFKAESAKFKS 198

Query: 61  MKKRQFPHTCSCKGYVRLAEDM 82
           MKKRQ PHTCSCKGY RLAED+
Sbjct: 199 MKKRQLPHTCSCKGYARLAEDL 220

BLAST of IVF0019873 vs. NCBI nr
Match: KAA0055644.1 (uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK09898.1 uncharacterized protein E5676_scaffold16G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 1.23e-39
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 12 MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 71
          MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 60

Query: 72 CKGYVRLAEDM 82
          CKGYVRLAEDM
Sbjct: 61 CKGYVRLAEDM 71

BLAST of IVF0019873 vs. NCBI nr
Match: KAA0051313.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (338), Expect = 2.87e-36
Identity = 71/82 (86.59%), Postives = 73/82 (89.02%), Query Frame = 0

Query: 1  MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
          MGRLWRA KSRMVK+IQSTSN EELSKMK SNIQS QDWMDF+KEKK ARFKA SAKFKS
Sbjct: 1  MGRLWRAGKSRMVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKS 60

Query: 61 MKKRQFPHTCSCKGYVRLAEDM 82
          MKKRQ PHTCS KGY RLAEDM
Sbjct: 61 MKKRQLPHTCSRKGYARLAEDM 82

BLAST of IVF0019873 vs. NCBI nr
Match: TYK07731.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 3.40e-34
Identity = 68/82 (82.93%), Postives = 70/82 (85.37%), Query Frame = 0

Query: 1  MGRLWRAEKSRMVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKS 60
          MGRLWR   SRMVK+IQSTSN EELSKMK SNIQS Q WMDF+KEKK ARFKA SAKFKS
Sbjct: 1  MGRLWRVGNSRMVKKIQSTSNYEELSKMKPSNIQSTQYWMDFVKEKKIARFKAESAKFKS 60

Query: 61 MKKRQFPHTCSCKGYVRLAEDM 82
          MKKRQ PHTCS KGY RLAEDM
Sbjct: 61 MKKRQLPHTCSRKGYARLAEDM 82

BLAST of IVF0019873 vs. NCBI nr
Match: TYK30814.1 (uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 3.70e-32
Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 12 MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 71
          MVKQIQSTSNNEELSKMK SNIQS QDWMDF+KEKKS  FKA SAKFKSMKKRQ PHTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDWMDFVKEKKSGWFKAESAKFKSMKKRQLPHTCS 60

Query: 72 CKGYVRLAEDM 82
           KGY RLAED+
Sbjct: 61 RKGYARLAEDI 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U5B02.9e-3189.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CF989.2e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U6151.7e-2886.59Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002... [more]
A0A5D3C7652.1e-2682.93Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00... [more]
A0A5D3D4T68.1e-2680.49Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00... [more]
Match NameE-valueIdentityDescription
KAA0050424.16.85e-4089.02uncharacterized protein E6C27_scaffold175G00120 [Cucumis melo var. makuwa][more]
KAA0055644.11.23e-39100.00uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0051313.12.87e-3686.59Plant transposase [Cucumis melo var. makuwa][more]
TYK07731.13.40e-3482.93Plant transposase [Cucumis melo var. makuwa][more]
TYK30814.13.70e-3285.92uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR33144:SF27SUBFAMILY NOT NAMEDcoord: 1..81
NoneNo IPR availablePANTHERPTHR33144OS10G0409366 PROTEIN-RELATEDcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019873.2IVF0019873.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane