IVF0019481 (gene) Melon (IVF77) v1

Overview


Name	IVF0019481
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA type zinc finger transcription factor family protein
Location	chr03: 2730182 .. 2732978 (-)
RNA-Seq Expression	IVF0019481
Synteny	IVF0019481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATTCTTTCTTGCCAACCTGATCTTTATCTTCTTTTTTGTTCTTCCTTTTTAATTATTTCTTCTAATGCGTTGTAATCAGATTACATTAATCGATAAAATCTTTCTTTAATTTTTCTCTCTATTATTAATCCCAAATTCGAACATAAAACTCCCACTACGCTGCGCCAAAAAGGGGGTCCAATACAATTCCTTTACTTGTTTTTCTCTTCTTTCCTCGATTTTTCTTCCTTTTTCTCTCGACCCTTTCCCCACCTTCGATTTCTCTCACGATTTTGCTCCTGGGTTCTTTGTTTTGGCCCTTTCCGTTTACAGATCCACCGTTTTTCCAAGTTCTTATCTCAGGTTTGTGATTTTAACTCGGTTTTGTTTCACATTTCCAGCTCCCAACTCCCAGATCACGATTGATTTCTCGTCGTTAAGTTCTTTGTTGTTAAACAATATTGTTTCTGGGTGGGTTTATTGGCTTGAGGTTCGTCTTTGTTTTGTTGGAATATCATGATCTAATTTTGAATGGGTTTGGGAGTTTAAGTTAATCTCTCTCTGGTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTCTTCTTCATGAAACAGAAGTTGATTTGGAGAGTATGTGTTTAGTTTGATTAATGTAGTTTTTCTGTTATTGTGATCTAACAAAACAGAGAAGGGAATTTAGGTTTGAGAGTTGGGGATTGCTTGTCATCTTGGTTGGTTGGGTGAAAAAGGCTCAGATCTAATTCCAAGGGCTTAGCTATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTAGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAATCTTGCTTCAAATGCAGCCACTGCAAAGGGACTCTAAAGGTATTGCACTGTATATTTTTGAGCTGGATTCTCATCACTGAACCAAAGGGTTAGGATATATTTATTCTTTTGTGTGTGTTTTAGAAACTCTGATACCTATACCATGTTAGTTGACAACTAAATTTAAAAGTTTAAGTTGATTGGTTATAATGCATATAAATATTCTTATACACGTATTCTTGATATGCTTTCTGCCCTTGCCAAAATACTTTTTCGAGGATATTTGATTGTGGTATTACCCTCTGCCTCAAGTATATCTATCACAATTTACATATCAAATGTTCCCAAGTATAGCTTAACTGTTCAAAGGAGCTAAAATATTAAGTACAATGACTCCTGATCTTGATTCGAACGATAGCAAGAGATTTTCTACAAGGGTTGGATGGTGGTTTTTGTTTTAAAGATGGAAAGTTATCTTACTCTTTATAACACTGGTCTCTGCTCGCCTTCAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTATATTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACTGGCAATTTCAACAAGAATTTTCAATCACGTACGTTTTGATCTTCTTTCAGTTAGCTTTATGTTTCACTTTCCAAAAATTTTGCGTTCACATGTTTAATTGTTTTTGAGTTTTATTTTCAACAGCTGCCAAGTCAGCTGAGAAGTTAACCCCAGAGCTGGTAATTTCCTGTTGTAATCAATTGAATTTGATCTTTGGGGGCTCTCTCCAAGGAGATAAATTATGCTTTGTATTGCCTCTGATTCTTGTAACCACTAACATGTTTCAGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAAACCACTTACTGAGATCTTGACAAATAATTCATTGTCCCCCTCTTCCCCCTCAACAAAAGGAAGAGTTTACATCTGTTGGAGCAGACTAATTAGTTGAGTTCAATGTTAAAAATATTTAAGTTTTGATATGAAATTTGAACAGTGTCATTTGGGATCAGTGAATATAAGTTGCAGAGATTCCAATATTCATCTCATATTACTTTTAGGAAAAACAGTAGATAGTTTTATAGAGGATTATATGAATTTGTTATTAAAAATACTTGCAGGTAACAGTTGAAAGCCAATCCTATCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTCTATCCCCATCAAACTATGCAGCACTAGAGGGTATTCTATATTGCAAACACCACTTCTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGGTCCGCTGCCCCAGTTCCTGAAGCTTAAAGTTCCAATTCTTATATCCTCATTCACGGTTTCGGACTTAACTCTCTATTTTACATGAATGTGTTTAACTTAAATTTTTATGATATTGAGATGGGAAAAGGGTAAAGGAAAAATATATATGTTTACCATCATTTCAGCTTATGTATTTGTTTTCAAGACTTGCATATTTGCATGTTTTGAGCGTTATGCATTGTGTTTTCGTGCACGAAAAAACATTTATGGCGAGAATAGGAACTCTCTTGATCTTGCTGTAAGGTTTTCATCATCCTGTAGCCCAAAAAGCTGCAGATTGAGTACCCAACAAAAAGAGACATTTCTCTTCAAATGGCTAAGGTGGG

mRNA sequence

CATAATTCTTTCTTGCCAACCTGATCTTTATCTTCTTTTTTGTTCTTCCTTTTTAATTATTTCTTCTAATGCGTTGTAATCAGATTACATTAATCGATAAAATCTTTCTTTAATTTTTCTCTCTATTATTAATCCCAAATTCGAACATAAAACTCCCACTACGCTGCGCCAAAAAGGGGGTCCAATACAATTCCTTTACTTGTTTTTCTCTTCTTTCCTCGATTTTTCTTCCTTTTTCTCTCGACCCTTTCCCCACCTTCGATTTCTCTCACGATTTTGCTCCTGGGTTCTTTGTTTTGGCCCTTTCCGTTTACAGATCCACCGTTTTTCCAAGTTCTTATCTCAGAGAAGGGAATTTAGGTTTGAGAGTTGGGGATTGCTTGTCATCTTGGTTGGTTGGGTGAAAAAGGCTCAGATCTAATTCCAAGGGCTTAGCTATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTAGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAATCTTGCTTCAAATGCAGCCACTGCAAAGGGACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTATATTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACTGGCAATTTCAACAAGAATTTTCAATCACCTGCCAAGTCAGCTGAGAAGTTAACCCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTATCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTCTATCCCCATCAAACTATGCAGCACTAGAGGGTATTCTATATTGCAAACACCACTTCTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGGTCCGCTGCCCCAGTTCCTGAAGCTTAAAGTTCCAATTCTTATATCCTCATTCACGGTTTCGGACTTAACTCTCTATTTTACATGAATGTGTTTAACTTAAATTTTTATGATATTGAGATGGGAAAAGGGTAAAGGAAAAATATATATGTTTACCATCATTTCAGCTTATGTATTTGTTTTCAAGACTTGCATATTTGCATGTTTTGAGCGTTATGCATTGTGTTTTCGTGCACGAAAAAACATTTATGGCGAGAATAGGAACTCTCTTGATCTTGCTGTAAGGTTTTCATCATCCTGTAGCCCAAAAAGCTGCAGATTGAGTACCCAACAAAAAGAGACATTTCTCTTCAAATGGCTAAGGTGGG

Coding sequence (CDS)

ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTAGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAATCTTGCTTCAAATGCAGCCACTGCAAAGGGACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTATATTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACTGGCAATTTCAACAAGAATTTTCAATCACCTGCCAAGTCAGCTGAGAAGTTAACCCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTATCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTCTATCCCCATCAAACTATGCAGCACTAGAGGGTATTCTATATTGCAAACACCACTTCTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGGTCCGCTGCCCCAGTTCCTGAAGCTTAA

Protein sequence

MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

Homology

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BLAST of IVF0019481 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

[Close]

BLAST of IVF0019481 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.5e-90
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKC+ACEKTVYPVE LSADG+SYHK+CFKCSHCK  L+LSNYSSMEGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKS-AEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLE 120
           HFEQLFKE+G+F+KNFQSPAK   +K TPEL R+PS+ AGMFSGTQDKCATC KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASM 180
           KVTVESQ YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRSAAPVPEA 190
           KR+ A    A
Sbjct: 181 KRATAAATAA 190

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BLAST of IVF0019481 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.5e-71
Identity = 122/184 (66.30%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKAC+KTVY ++ L+ +G +YHKSCF+C+HCKGTL +SNYSSM+GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GN++KNFQ  A   EK    LTR+PSK +  FSGTQDKCATC KTVYPLEK
Sbjct: 61  HFEQLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VT+E +SYHK+CF+C+H GC L+ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RSAA 185
           R +A
Sbjct: 181 RRSA 182

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BLAST of IVF0019481 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 8.5e-70
Identity = 115/184 (62.50%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KC  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL++SNYSSM+GVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNF+KNFQ P K+ +   PELTR+PSK + +F GTQDKCA C KTVYPLEK
Sbjct: 61  HFEQLFKESGNFSKNFQ-PGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           + +E + +HK+CF+C+HGGC L+ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RSAA 185
           R+A+
Sbjct: 181 RTAS 180

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BLAST of IVF0019481 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 125/189 (66.14%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQ KC AC+KTV+ ++ L+ADGV YHK+CFKCSHCKG L + +YSSM+GVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETG+F+K F    +S +K   EL R+PSK    FSGTQDKCA C KTVYPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASM 180
           +T+E +SYHKSCFKCSHGGC L+ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S 
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 KRSAAPVPE 189
           +     VPE
Sbjct: 181 EVLPEVVPE 186

[Close]

BLAST of IVF0019481 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.3e-107
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 190
           RSAAPVPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of IVF0019481 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.3e-107
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 190
           RSAAPVPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of IVF0019481 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.5e-104
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGC++SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 190
           R AA VPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of IVF0019481 vs. ExPASy TrEMBL
Match: A0A6J1FFI9 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111445264 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.5e-104
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGC++SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 190
           R AA VPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of IVF0019481 vs. ExPASy TrEMBL
Match: A0A6J1JU67 (LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111487536 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.3e-101
Identity = 181/189 (95.77%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEK TPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEK-TPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVE+Q YHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK ASMK
Sbjct: 121 VTVENQCYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASMK 180

Query: 181 RSAAPVPEA 190
           R+AA VPEA
Sbjct: 181 RNAASVPEA 188

[Close]

BLAST of IVF0019481 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 399 bits (1025), Expect = 1.59e-140
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 189
           RSAAPVPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of IVF0019481 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 396 bits (1017), Expect = 2.65e-139
Identity = 186/189 (98.41%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVYPVEQLSADG+SYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 189
           RSAAPVPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of IVF0019481 vs. NCBI nr
Match: XP_022939310.1 (LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939312.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022993072.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >XP_022993073.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >KAG7015999.1 LIM domain-containing protein WLIM2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389 bits (999), Expect = 1.47e-136
Identity = 183/189 (96.83%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGC++SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 189
           R AA VPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of IVF0019481 vs. NCBI nr
Match: KAG6578438.1 (LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388 bits (996), Expect = 4.22e-136
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCK+CEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKSCEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGC++SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 189
           R AA VPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of IVF0019481 vs. NCBI nr
Match: XP_023550254.1 (LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388 bits (996), Expect = 4.22e-136
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQSYHKSCFKCSHGGC++SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RSAAPVPEA 189
           R AA VPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of IVF0019481 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-94
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

[Close]

BLAST of IVF0019481 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-94
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

[Close]

BLAST of IVF0019481 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-94
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

[Close]

BLAST of IVF0019481 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-94
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

[Close]

BLAST of IVF0019481 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-94
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ+YHKSCFKCSHGGC +SPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RSAA 185
           RSAA
Sbjct: 181 RSAA 184

The following BLAST results are available for this feature:

BLAST of IVF0019481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	1.4e-93	86.41	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	1.5e-90	81.58	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	4.5e-71	66.30	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	8.5e-70	62.50	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q7F9R9	1.9e-69	66.14	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of IVF0019481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3E4	5.3e-107	100.00	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A0A0KAA4	5.3e-107	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	5.5e-104	96.83	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]
A0A6J1FFI9	5.5e-104	96.83	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A6J1JU67	4.3e-101	95.77	LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of IVF0019481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138434.1	1.59e-140	100.00	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_038884117.1	2.65e-139	98.41	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_022939310.1	1.47e-136	96.83	LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM do...	[more]
KAG6578438.1	4.22e-136	96.30	LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023550254.1	4.22e-136	96.30	LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0019481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	1.0e-94	86.41	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.0e-94	86.41	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.0e-94	86.41	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	1.0e-94	86.41	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	1.0e-94	86.41	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 8.0E-14 score: 61.9 coord: 107..159 e-value: 2.8E-13 score: 60.1
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 108..163 e-value: 2.6E-11 score: 43.5 coord: 10..65 e-value: 2.4E-12 score: 46.9
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.672
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 106..166 score: 12.711699
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 4..74 e-value: 3.6E-21 score: 77.1 coord: 102..172 e-value: 1.6E-20 score: 75.0
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..189
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 1..189
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 108..168 e-value: 9.36825E-37 score: 120.268
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 4.94217E-42 score: 133.744
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 100..133
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019481.1	IVF0019481.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding