Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCTCACCACTGAAAAATGCAATAATCACAAAAAGTAATTGTTACAAAGGTATTCCAACAAAACATTCGTACAGGAAAATTTACCGATCAGTAACGACTTCTGAAGAAGGTCAGCAAAGTCTGTTAACAAGTCCGGTTCGGAGTACGCATGTAGGCGATCCTCGAACCCAATCTCCCTTGGGCCTATAGAAAAAGAGGTCCCTGAAAGTTCTCCACCGCGTACATTTCACTCGTCTGCATCCTCTTCTATTCCGAGAACTCGAGTTCAGTTGAAACGGTGGTATTAAAATCAGATTCTTTCGATAGTGAAGACAATGTCGTTCTGTCGATACTTCTTCAGCATAAGGCTGGACATCCAACTGATTCATCACCTACTCCTCCAAAACTTACTCAGGTTCCCTATTGTCCATCACACGTTACTTTACCTCCTCAGGAGGTTCCGACCCGAACTACGAATCATGGTACATTTTCCGCTGCTTCTGATTCTCTACATGCAACTCTTCCAACTGATGAAGAAGAAGCCAGTGATAATGCTGATGAAGATTATGTTCCTGTGTAG
mRNA sequence
ATGGCTCCCTCACCACTGAAAAATGCAATAATCACAAAAAGTAATTGTTACAAAGGTATTCCAACAAAACATTCGTACAGGAAAATTTACCGATCAGTAACGACTTCTGAAGAAGGTCAGCAAAGTCTGTTAACAAGTCCGGTTCGGAGTACGCATCATAAGGCTGGACATCCAACTGATTCATCACCTACTCCTCCAAAACTTACTCAGGTTCCCTATTGTCCATCACACGTTACTTTACCTCCTCAGGAGGTTCCGACCCGAACTACGAATCATGGTACATTTTCCGCTGCTTCTGATTCTCTACATGCAACTCTTCCAACTGATGAAGAAGAAGCCAGTGATAATGCTGATGAAGATTATGTTCCTGTGTAG
Coding sequence (CDS)
ATGGCTCCCTCACCACTGAAAAATGCAATAATCACAAAAAGTAATTGTTACAAAGGTATTCCAACAAAACATTCGTACAGGAAAATTTACCGATCAGTAACGACTTCTGAAGAAGGTCAGCAAAGTCTGTTAACAAGTCCGGTTCGGAGTACGCATCATAAGGCTGGACATCCAACTGATTCATCACCTACTCCTCCAAAACTTACTCAGGTTCCCTATTGTCCATCACACGTTACTTTACCTCCTCAGGAGGTTCCGACCCGAACTACGAATCATGGTACATTTTCCGCTGCTTCTGATTCTCTACATGCAACTCTTCCAACTGATGAAGAAGAAGCCAGTGATAATGCTGATGAAGATTATGTTCCTGTGTAG
Protein sequence
MAPSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHHKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNADEDYVPV
Homology
BLAST of IVF0019314 vs. ExPASy TrEMBL
Match:
A0A1S4E1J1 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991441 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 4.8e-32
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0
Query: 50 STHHKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTD 109
+ HKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTD
Sbjct: 89 AVRHKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTD 148
Query: 110 EEEASDNADEDYVPV 125
EEEASDNADEDYVPV
Sbjct: 149 EEEASDNADEDYVPV 163
BLAST of IVF0019314 vs. ExPASy TrEMBL
Match:
A0A5A7UK00 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00310 PE=4 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 3.0e-26
Identity = 87/186 (46.77%), Postives = 92/186 (49.46%), Query Frame = 0
Query: 3 PSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHH--------- 62
P KNA TK YKGIPTKHSY KI RSV TS+EG QSLLTSPVRSTH
Sbjct: 647 PHHQKNATTTKGKHYKGIPTKHSYEKIRRSVATSKEGHQSLLTSPVRSTHSRRSLDPVSP 706
Query: 63 -------------------------------------------------------KAGHP 122
K GHP
Sbjct: 707 VPIKKEVPKSSPPCTFHLSASSFVPRTRGSIEIVVLDSDFSDSKDNVVLSTLLQGKDGHP 766
Query: 123 TDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNAD 125
TDSSPTP K TQV S V PP+EV +RTTNHGT SAA DS HATLPTDEEEAS++ D
Sbjct: 767 TDSSPTPLKPTQVSCSRSRVASPPKEVLSRTTNHGTSSAAPDSPHATLPTDEEEASEDTD 826
BLAST of IVF0019314 vs. ExPASy TrEMBL
Match:
A0A5D3C212 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00470 PE=4 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 3.0e-26
Identity = 87/186 (46.77%), Postives = 92/186 (49.46%), Query Frame = 0
Query: 3 PSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHH--------- 62
P KNA TK YKGIPTKHSY KI RSV TS+EG QSLLTSPVRSTH
Sbjct: 645 PHHQKNATTTKGKHYKGIPTKHSYEKIRRSVATSKEGHQSLLTSPVRSTHSRRSLDPVSP 704
Query: 63 -------------------------------------------------------KAGHP 122
K GHP
Sbjct: 705 VPIKKEVPKSSPPCTFHLSASSFVPRTRGSIEIVVLDSDFSDSKDNVVLSTLLQGKDGHP 764
Query: 123 TDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNAD 125
TDSSPTP K TQV S V PP+EV +RTTNHGT SAA DS HATLPTDEEEAS++ D
Sbjct: 765 TDSSPTPLKPTQVSCSRSRVASPPKEVLSRTTNHGTSSAAPDSPHATLPTDEEEASEDTD 824
BLAST of IVF0019314 vs. ExPASy TrEMBL
Match:
A0A5D3DC52 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00430 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 9.7e-17
Identity = 71/182 (39.01%), Postives = 85/182 (46.70%), Query Frame = 0
Query: 1 MAPSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHHKAG---- 60
MAPSP K A K YKGIPT+H ++KI RSV +EGQQSL+TSP+RSTH
Sbjct: 66 MAPSPSKTATTMKGKRYKGIPTRHPFKKIRRSVVAFDEGQQSLVTSPIRSTHAGRSPDPI 125
Query: 61 ------------------HPTDSS------------------------------------ 120
HP+ SS
Sbjct: 126 SPVIVKKEVLEGFPLYTCHPSASSSVLGHRGSVEKVVLNSYSSDGEDNVLLSTLLHRKAG 185
Query: 121 -PTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNADEDY 124
T PK TQVP P V P +EV ++T +HGT S A DS A+LP D EEASD+ +EDY
Sbjct: 186 NSTYPKPTQVPRSPPRVASPLKEVLSQTMDHGTTSIAPDSPKASLPIDAEEASDDTNEDY 245
BLAST of IVF0019314 vs. ExPASy TrEMBL
Match:
A0A5D3C7L1 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001600 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 5.3e-15
Identity = 58/127 (45.67%), Postives = 74/127 (58.27%), Query Frame = 0
Query: 1 MAPSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHHKAGHPTD 60
M SP K TK CYKGI T+H ++KI RSV ++ Q SLL +PVR + D
Sbjct: 1 MPASPSKTMATTKGKCYKGIRTRHPFKKIRRSVAATDATQHSLLKNPVRVSVETVVLDFD 60
Query: 61 SSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASD---SLHATLPTDEEEASDNA 120
SS V + PS V P ++VP+RTT+HG SA S +LPTD++EASD+
Sbjct: 61 SS-------DVLHSPSWVASPRKDVPSRTTDHGKSSATPSFPASPQVSLPTDDDEASDDI 120
Query: 121 DEDYVPV 125
DEDYVPV
Sbjct: 121 DEDYVPV 120
BLAST of IVF0019314 vs. NCBI nr
Match:
XP_016901855.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])
HSP 1 Score: 147 bits (370), Expect = 2.87e-42
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query: 53 HKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEE 112
HKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEE
Sbjct: 92 HKAGHPTDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEE 151
Query: 113 ASDNADEDYVPV 124
ASDNADEDYVPV
Sbjct: 152 ASDNADEDYVPV 163
BLAST of IVF0019314 vs. NCBI nr
Match:
TYK05238.1 (F5J5.1 [Cucumis melo var. makuwa])
HSP 1 Score: 128 bits (321), Expect = 2.14e-31
Identity = 87/186 (46.77%), Postives = 92/186 (49.46%), Query Frame = 0
Query: 3 PSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHH--------- 62
P KNA TK YKGIPTKHSY KI RSV TS+EG QSLLTSPVRSTH
Sbjct: 645 PHHQKNATTTKGKHYKGIPTKHSYEKIRRSVATSKEGHQSLLTSPVRSTHSRRSLDPVSP 704
Query: 63 -------------------------------------------------------KAGHP 122
K GHP
Sbjct: 705 VPIKKEVPKSSPPCTFHLSASSFVPRTRGSIEIVVLDSDFSDSKDNVVLSTLLQGKDGHP 764
Query: 123 TDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNAD 124
TDSSPTP K TQV S V PP+EV +RTTNHGT SAA DS HATLPTDEEEAS++ D
Sbjct: 765 TDSSPTPLKPTQVSCSRSRVASPPKEVLSRTTNHGTSSAAPDSPHATLPTDEEEASEDTD 824
BLAST of IVF0019314 vs. NCBI nr
Match:
KAA0056263.1 (F5J5.1 [Cucumis melo var. makuwa])
HSP 1 Score: 128 bits (321), Expect = 2.14e-31
Identity = 87/186 (46.77%), Postives = 92/186 (49.46%), Query Frame = 0
Query: 3 PSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHH--------- 62
P KNA TK YKGIPTKHSY KI RSV TS+EG QSLLTSPVRSTH
Sbjct: 647 PHHQKNATTTKGKHYKGIPTKHSYEKIRRSVATSKEGHQSLLTSPVRSTHSRRSLDPVSP 706
Query: 63 -------------------------------------------------------KAGHP 122
K GHP
Sbjct: 707 VPIKKEVPKSSPPCTFHLSASSFVPRTRGSIEIVVLDSDFSDSKDNVVLSTLLQGKDGHP 766
Query: 123 TDSSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNAD 124
TDSSPTP K TQV S V PP+EV +RTTNHGT SAA DS HATLPTDEEEAS++ D
Sbjct: 767 TDSSPTPLKPTQVSCSRSRVASPPKEVLSRTTNHGTSSAAPDSPHATLPTDEEEASEDTD 826
BLAST of IVF0019314 vs. NCBI nr
Match:
KAA0068158.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK21078.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 96.7 bits (239), Expect = 3.06e-21
Identity = 71/182 (39.01%), Postives = 85/182 (46.70%), Query Frame = 0
Query: 1 MAPSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHHKAG---- 60
MAPSP K A K YKGIPT+H ++KI RSV +EGQQSL+TSP+RSTH
Sbjct: 66 MAPSPSKTATTMKGKRYKGIPTRHPFKKIRRSVVAFDEGQQSLVTSPIRSTHAGRSPDPI 125
Query: 61 ------------------HPTDSSP----------------------------------- 120
HP+ SS
Sbjct: 126 SPVIVKKEVLEGFPLYTCHPSASSSVLGHRGSVEKVVLNSYSSDGEDNVLLSTLLHRKAG 185
Query: 121 --TPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASDSLHATLPTDEEEASDNADEDY 123
T PK TQVP P V P +EV ++T +HGT S A DS A+LP D EEASD+ +EDY
Sbjct: 186 NSTYPKPTQVPRSPPRVASPLKEVLSQTMDHGTTSIAPDSPKASLPIDAEEASDDTNEDY 245
BLAST of IVF0019314 vs. NCBI nr
Match:
KAA0058484.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 90.9 bits (224), Expect = 1.96e-18
Identity = 58/127 (45.67%), Postives = 74/127 (58.27%), Query Frame = 0
Query: 1 MAPSPLKNAIITKSNCYKGIPTKHSYRKIYRSVTTSEEGQQSLLTSPVRSTHHKAGHPTD 60
M SP K TK CYKGI T+H ++KI RSV ++ Q SLL +PVR + D
Sbjct: 1 MPASPSKTMATTKGKCYKGIRTRHPFKKIRRSVAATDATQHSLLKNPVRVSVETVVLDFD 60
Query: 61 SSPTPPKLTQVPYCPSHVTLPPQEVPTRTTNHGTFSAASD---SLHATLPTDEEEASDNA 120
SS V + PS V P ++VP+RTT+HG SA S +LPTD++EASD+
Sbjct: 61 SS-------DVLHSPSWVASPRKDVPSRTTDHGKSSATPSFPASPQVSLPTDDDEASDDI 120
Query: 121 DEDYVPV 124
DEDYVPV
Sbjct: 121 DEDYVPV 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S4E1J1 | 4.8e-32 | 96.00 | uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... | [more] |
A0A5A7UK00 | 3.0e-26 | 46.77 | F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00310 PE=4 SV... | [more] |
A0A5D3C212 | 3.0e-26 | 46.77 | F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00470 PE=4 SV... | [more] |
A0A5D3DC52 | 9.7e-17 | 39.01 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5D3C7L1 | 5.3e-15 | 45.67 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
Match Name | E-value | Identity | Description | |
XP_016901855.1 | 2.87e-42 | 100.00 | PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] | [more] |
TYK05238.1 | 2.14e-31 | 46.77 | F5J5.1 [Cucumis melo var. makuwa] | [more] |
KAA0056263.1 | 2.14e-31 | 46.77 | F5J5.1 [Cucumis melo var. makuwa] | [more] |
KAA0068158.1 | 3.06e-21 | 39.01 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK21078.1 flocculat... | [more] |
KAA0058484.1 | 1.96e-18 | 45.67 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculat... | [more] |
Match Name | E-value | Identity | Description | |