IVF0019139 (gene) Melon (IVF77) v1

Overview


Name	IVF0019139
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Membrane-associated 30 kDa protein
Location	chr08: 14757422 .. 14757592 (+)
RNA-Seq Expression	IVF0019139
Synteny	IVF0019139

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCCCGCTAG

mRNA sequence

ATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCCCGCTAG

Coding sequence (CDS)

ATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCCCGCTAG

Protein sequence

MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR

Homology

[Close]

BLAST of IVF0019139 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-25
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 57
          MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 31 MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of IVF0019139 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-25
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 57
          MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 31 MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of IVF0019139 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 57
          ML ETLRDDHDVDC+D YSIDHHKAKDSVKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 33 MLFETLRDDHDVDCVDPYSIDHHKAKDSVKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of IVF0019139 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 1  MLSETLRDDHD--VDC-IDSYSIDHHKAKDSVKCWLENLESGPSPKGPGH 48
          +LSET RDDHD  VD  ID YSI + KAK+S+ CWL  L SGPSP GPGH
Sbjct: 33 LLSETPRDDHDHGVDYHIDPYSIVYQKAKESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of IVF0019139 vs. ExPASy TrEMBL
Match: A0A0A0L125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-05
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 24  KAKDSVKCWLENLESGPSPKGPGHGTRPPAH 55
           KAK+ VK WLENL SGPSP GPGHGT+PPAH
Sbjct: 91  KAKERVKPWLENLGSGPSPGGPGHGTKPPAH 121

[Close]

BLAST of IVF0019139 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.39e-34
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 56
          MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 31 MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of IVF0019139 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.39e-34
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 56
          MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 31 MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of IVF0019139 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (272), Expect = 1.59e-29
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR 56
          ML ETLRDDHDVDC+D YSIDHHKAKDSVKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 33 MLFETLRDDHDVDCVDPYSIDHHKAKDSVKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of IVF0019139 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 5.26e-11
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 1  MLSETLRDDHD--VDC-IDSYSIDHHKAKDSVKCWLENLESGPSPKGPGH 47
          +LSET RDDHD  VD  ID YSI + KAK+S+ CWL  L SGPSP GPGH
Sbjct: 33 LLSETPRDDHDHGVDYHIDPYSIVYQKAKESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of IVF0019139 vs. NCBI nr
Match: KAG7018440.1 (hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.8 bits (138), Expect = 3.77e-09
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 1  MLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGH 47
          +LSET    H VD ID YSI + KAK++V CWL  L SGPSP GPGH
Sbjct: 41 VLSETSN--HGVDYIDPYSIVYQKAKETVSCWLGKLSSGPSPSGPGH 85

The following BLAST results are available for this feature:

BLAST of IVF0019139 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0019139 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TL44	2.0e-25	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	2.0e-25	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJV8	1.3e-21	89.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KTV4	2.4e-07	66.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]
A0A0A0L125	1.7e-05	80.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1	[more]

BLAST of IVF0019139 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043548.1	1.39e-34	100.00	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	1.39e-34	100.00	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAA0043550.1	1.59e-29	89.29	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]
KGN53025.1	5.26e-11	66.00	hypothetical protein Csa_015299 [Cucumis sativus]	[more]
KAG7018440.1	3.77e-09	61.70	hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0019139 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019139.1	IVF0019139.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response