IVF0019021 (gene) Melon (IVF77) v1

Overview


Name	IVF0019021
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein MNN4-like
Location	chr06: 10602693 .. 10603442 (+)
RNA-Seq Expression	IVF0019021
Synteny	IVF0019021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGGAGCGAGAAGAGCTCCTTAACGAAGTGGACAAGATGGCCCTCCTCGTGAATAAGAGCAAAGGAAAAGAAAAGACTATTGATGGGTACGACAAGGAGTTCGAAAAGGAACTAGAGGAGTTCATTTCTTTGGAGGATGGGGTTGTGGAGAAACAACCAAAGAAAAAAAAAGCGTCGGAAGGTCAGGATGCCACGAAGCGAGAAAAGAAGAATAAAAAGGCTCAGCAAGAAAAGGAGAGCCAAGAAAGCGAACAAGGTGTCCTTTCCATTGAGGAGTTGGGCAAACATTTTATGATTGAGAAGGGACTATTCCCAGTTAAAGGTCAGTTGCCTTCGTTTCTCGATGTCACCTATCAAGGCACTCGGATGGAAACAATTCTTCGAAGGGGTGACGACAATTAGGTCAGGCGTCATGAATCTATTCTACAATGGAAGCATCAACACAGAGAGACACCCATTGTTAAAGGGAAGAAGGTAAATTTTGTGCCAAAAGCGATTAACGCATTATCTGGGCTAGCTTATATGGCGGTTGGGCACCCAATATTTGATGAACCATCAGACCGCAACATGCAAGACGCGTTAGAAAGAGTTGCATGGCCAAGAACAAAATGGGACATAACGGCAATCGGGAAGTACCAACTCCTCCTACATAACTTGAAGACCGTGGTAAGGTTTGGTTGGTATTCATCAAGAAGAAGCTCATGTCCACTCGCGACAACAGTACAATTTCACTTAAAAAAATAA

mRNA sequence

ATGTTGAGGGAGCGAGAAGAGCTCCTTAACGAAGTGGACAAGATGGCCCTCCTCGTGAATAAGAGCAAAGGAAAAGAAAAGACTATTGATGGGTACGACAAGGAGTTCGAAAAGGAACTAGAGGAGTTCATTTCTTTGGAGGATGGGGTTGTGGAGAAACAACCAAAGAAAAAAAAAGCGTCGGAAGGTCAGGATGCCACGAAGCGAGAAAAGAAGAATAAAAAGGCTCAGCAAGAAAAGGAGAGCCAAGAAAGCGAACAAGGTGTCAGGCGTCATGAATCTATTCTACAATGGAAGCATCAACACAGAGAGACACCCATTGTTAAAGGGAAGAAGGTAAATTTTGTGCCAAAAGCGATTAACGCATTATCTGGGCTAGCTTATATGGCGGTTGGGCACCCAATATTTGATGAACCATCAGACCGCAACATGCAAGACGCGTTAGAAAGAGTTGCATGGCCAAGAACAAAATGGGACATAACGGCAATCGGGAAGTACCAACTCCTCCTACATAACTTGAAGACCGTGGTAAGGTTTGGTTGGTATTCATCAAGAAGAAGCTCATGTCCACTCGCGACAACAGTACAATTTCACTTAAAAAAATAA

Coding sequence (CDS)

ATGTTGAGGGAGCGAGAAGAGCTCCTTAACGAAGTGGACAAGATGGCCCTCCTCGTGAATAAGAGCAAAGGAAAAGAAAAGACTATTGATGGGTACGACAAGGAGTTCGAAAAGGAACTAGAGGAGTTCATTTCTTTGGAGGATGGGGTTGTGGAGAAACAACCAAAGAAAAAAAAAGCGTCGGAAGGTCAGGATGCCACGAAGCGAGAAAAGAAGAATAAAAAGGCTCAGCAAGAAAAGGAGAGCCAAGAAAGCGAACAAGGTGTCAGGCGTCATGAATCTATTCTACAATGGAAGCATCAACACAGAGAGACACCCATTGTTAAAGGGAAGAAGGTAAATTTTGTGCCAAAAGCGATTAACGCATTATCTGGGCTAGCTTATATGGCGGTTGGGCACCCAATATTTGATGAACCATCAGACCGCAACATGCAAGACGCGTTAGAAAGAGTTGCATGGCCAAGAACAAAATGGGACATAACGGCAATCGGGAAGTACCAACTCCTCCTACATAACTTGAAGACCGTGGTAAGGTTTGGTTGGTATTCATCAAGAAGAAGCTCATGTCCACTCGCGACAACAGTACAATTTCACTTAAAAAAATAA

Protein sequence

MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKASEGQDATKREKKNKKAQQEKESQESEQGVRRHESILQWKHQHRETPIVKGKKVNFVPKAINALSGLAYMAVGHPIFDEPSDRNMQDALERVAWPRTKWDITAIGKYQLLLHNLKTVVRFGWYSSRRSSCPLATTVQFHLKK

Homology

[Close]

BLAST of IVF0019021 vs. ExPASy TrEMBL
Match: A0A5D3DX47 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00690 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.3e-34
Identity = 97/118 (82.20%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA 60
           MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA
Sbjct: 52  MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA 111

Query: 61  SEGQDATKREKKNKKAQQEKESQESEQGVRRHESILQWKHQHRETPI--VKGKKVNFV 117
           SEGQDATKREKKNKKAQQEKESQESEQGV   E +   KH   E  +  VKG+  +F+
Sbjct: 112 SEGQDATKREKKNKKAQQEKESQESEQGVLSIEEL--GKHFMIEKGLFPVKGQLPSFL 167

[Close]

BLAST of IVF0019021 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 104/210 (49.52%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 16  ALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKASEGQDATKREKKNKK 75
           AL   K + KEKT D Y KEFEKELEE   LED VVEKQPKKK+  EGQDA KREKKNK 
Sbjct: 44  ALAEEKKERKEKTTDEYSKEFEKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKT 103

Query: 76  AQQEKESQESEQ-GVRRHESI---------------------------LQWK-------- 135
            Q+E+ESQ+SEQ GV   E +                           L+WK        
Sbjct: 104 VQREQESQKSEQEGVLFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTT 163

Query: 136 --------------HQHRETPIVKGKKVNFVPKAINALSGLAYMAVGHPIFDEPSDRNMQ 176
                         +  R   IVKGK VNF PK +N L GL    V +PIF EPSD +MQ
Sbjct: 164 IRPSVMNLFYNGSINTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYPIFKEPSDIDMQ 223

[Close]

BLAST of IVF0019021 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.8e-16
Identity = 82/231 (35.50%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 7   ELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKAS----- 66
           ELLN+ +K+ L V K K K KT + Y  E EKELE+    ED  V K  KK+K +     
Sbjct: 34  ELLNKAEKITLSVKKDKAK-KTSEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKV 93

Query: 67  -EGQDATKREKKNKKA------QQEKESQES--EQGVRRHESILQWKHQHRETP------ 126
              Q A ++E+K KK       ++E+E QES  E+ +  +E   Q+  + R  P      
Sbjct: 94  LSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIML 153

Query: 127 ------------------------------------------IVKGKKVNFVPKAINALS 176
                                                     ++KGKKV F P+ INAL 
Sbjct: 154 AFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYISKKKHYVMIKGKKVYFRPEVINALY 213

[Close]

BLAST of IVF0019021 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-15
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 107 IVKGKKVNFVPKAINALSGLAYMAVGHPIFDEPSDRNMQDALERVAWPRTKWDITAIGKY 166
           +V+GKKV+F P AIN L GL    + H IF  P +R+++DAL+RVAWPRTKWDI   GKY
Sbjct: 1   MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60

Query: 167 QLLLHNLKT 176
           QL L NL T
Sbjct: 61  QLFLQNLNT 69

[Close]

BLAST of IVF0019021 vs. ExPASy TrEMBL
Match: A0A5A7UID3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00240 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15
Identity = 65/156 (41.67%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 20  NKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKASEGQDATKREKKNKKAQQE 79
           NK KG EKT   Y KE  KE+EE   LED     +PKKK+    ++   RE+  K+ ++E
Sbjct: 51  NKEKGNEKTFKDYCKEASKEIEELSPLEDDA--PKPKKKRKVAMKNKALREQVRKR-REE 110

Query: 80  KESQESEQGVRRHESILQWKHQHRETPIVKGKKVNFVPKAINALSGLAYMAVGHPIFDEP 139
           KE    + G   H +             VKGK+V+F   AINA+  L    +GH  F   
Sbjct: 111 KEKNRVKNGEEEHYA------------EVKGKRVDFGLDAINAIYRLENNEIGHVTFKNL 170

Query: 140 SDRNMQDALERVAWPRTKWDITAIGKYQLLLHNLKT 176
            D N+Q ALE+V WP TKWD    GKYQL+ HNL T
Sbjct: 171 KDLNLQKALEKVTWPGTKWDRAQPGKYQLIPHNLTT 191

[Close]

BLAST of IVF0019021 vs. NCBI nr
Match: KAA0048466.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28263.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 1.81e-43
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA 60
           MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA
Sbjct: 52  MLREREELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKA 111

Query: 61  SEGQDATKREKKNKKAQQEKESQESEQGV 89
           SEGQDATKREKKNKKAQQEKESQESEQGV
Sbjct: 112 SEGQDATKREKKNKKAQQEKESQESEQGV 140

[Close]

BLAST of IVF0019021 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (376), Expect = 3.07e-40
Identity = 104/210 (49.52%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 16  ALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKASEGQDATKREKKNKK 75
           AL   K + KEKT D Y KEFEKELEE   LED VVEKQPKKK+  EGQDA KREKKNK 
Sbjct: 44  ALAEEKKERKEKTTDEYSKEFEKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKT 103

Query: 76  AQQEKESQESEQ-GVRRHESI---------------------------LQWK-------- 135
            Q+E+ESQ+SEQ GV   E +                           L+WK        
Sbjct: 104 VQREQESQKSEQEGVLFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTT 163

Query: 136 --------------HQHRETPIVKGKKVNFVPKAINALSGLAYMAVGHPIFDEPSDRNMQ 175
                         +  R   IVKGK VNF PK +N L GL    V +PIF EPSD +MQ
Sbjct: 164 IRPSVMNLFYNGSINTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYPIFKEPSDIDMQ 223

[Close]

BLAST of IVF0019021 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.49e-18
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 107 IVKGKKVNFVPKAINALSGLAYMAVGHPIFDEPSDRNMQDALERVAWPRTKWDITAIGKY 166
           +V+GKKV+F P AIN L GL    + H IF  P +R+++DAL+RVAWPRTKWDI   GKY
Sbjct: 1   MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60

Query: 167 QLLLHNLKT 175
           QL L NL T
Sbjct: 61  QLFLQNLNT 69

[Close]

BLAST of IVF0019021 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 6.00e-18
Identity = 85/247 (34.41%), Postives = 114/247 (46.15%), Query Frame = 0


Query: 7   ELLNEVDKMALLVNKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKAS----- 66
           ELLN+ +K+ L V K K K KT + Y  E EKELE+    ED  V K  KK+K +     
Sbjct: 34  ELLNKAEKITLSVKKDKAK-KTSEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKV 93

Query: 67  -EGQDATKREKKNKKA------QQEKESQESE--QGVRRHESILQWKHQHRETP------ 126
              Q A ++E+K KK       ++E+E QESE  + +  +E   Q+  + R  P      
Sbjct: 94  LSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIML 153

Query: 127 ------------------------------------------IVKGKKVNFVPKAINALS 186
                                                     ++KGKKV F P+ INAL 
Sbjct: 154 AFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYISKKKHYVMIKGKKVYFRPEVINALY 213

Query: 187 GLAYMAVGHPIFDEPSDRNMQDALERVAWPRTKWDITAIGKYQLLLHNLKTV--VRFGWY 189
            L    +GH IF  P+ ++MQDAL RV+WP TKWD T  GKYQL  HNL T   VR  + 
Sbjct: 214 RLDDNVIGHAIFKNPTQQDMQDALARVSWPGTKWDRTPTGKYQLFPHNLNTAANVRLLFC 273

[Close]

BLAST of IVF0019021 vs. NCBI nr
Match: KAA0053239.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 6.77e-17
Identity = 65/156 (41.67%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 20  NKSKGKEKTIDGYDKEFEKELEEFISLEDGVVEKQPKKKKASEGQDATKREKKNKKAQQE 79
           NK KG EKT   Y KE  KE+EE   LED   +  PKKK+    ++   RE+  K+ ++E
Sbjct: 51  NKEKGNEKTFKDYCKEASKEIEELSPLEDDAPK--PKKKRKVAMKNKALREQVRKR-REE 110

Query: 80  KESQESEQGVRRHESILQWKHQHRETPIVKGKKVNFVPKAINALSGLAYMAVGHPIFDEP 139
           KE    + G   H +             VKGK+V+F   AINA+  L    +GH  F   
Sbjct: 111 KEKNRVKNGEEEHYAE------------VKGKRVDFGLDAINAIYRLENNEIGHVTFKNL 170

Query: 140 SDRNMQDALERVAWPRTKWDITAIGKYQLLLHNLKT 175
            D N+Q ALE+V WP TKWD    GKYQL+ HNL T
Sbjct: 171 KDLNLQKALEKVTWPGTKWDRAQPGKYQLIPHNLTT 191

The following BLAST results are available for this feature:

BLAST of IVF0019021 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0019021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DX47	6.3e-34	82.20	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5A7TZE0	1.4e-33	49.52	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3DQE5	7.8e-16	35.50	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00...	[more]
A0A5D3D7L3	5.0e-15	59.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UID3	6.6e-15	41.67	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00...	[more]

BLAST of IVF0019021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048466.1	1.81e-43	100.00	protein MNN4-like [Cucumis melo var. makuwa] >TYK28263.1 protein MNN4-like [Cucu...	[more]
KAA0048500.1	3.07e-40	49.52	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
KAA0057652.1	1.49e-18	59.42	hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19...	[more]
TYK25886.1	6.00e-18	34.41	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0053239.1	6.77e-17	41.67	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0019021 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019021.1	IVF0019021.1	mRNA