IVF0018995 (gene) Melon (IVF77) v1

Overview


Name	IVF0018995
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	histone H2B-like
Location	chr12: 8876216 .. 8877334 (+)
RNA-Seq Expression	IVF0018995
Synteny	IVF0018995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGTAAGAGACTTAAGAGTATCGATATAATTTAACATGATATTATTTAATTAAATCAAATTTTGCAATGAACTTGTCAGTGACACATGAATTTGAACTCTTTTAGCTTTCACCCCACTAATTTTATAGCAAAAAAAAAAAAAAAATTCACTCATTAATGCATGTAATTTCATATTGTATATGCTTTATAATTAACTGAACACATAAAGGTGTAGCAGACAGAGCCATCATGTGCAAATATATAGAACAACGAATGTGCAGATATAATTGTGTTTGAGTTGAATGAATAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGTGTGTATATATATATATTCAAATTATTATATAATCATTTTTATTATTTTATTGATATATAATAATTAATGTGTTTTGGAAATTGGTGGGGCGATAATTGATAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

mRNA sequence

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Coding sequence (CDS)

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Protein sequence

MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPVEEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL

Homology

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BLAST of IVF0018995 vs. ExPASy Swiss-Prot
Match: Q9SGE3 (Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-30
Identity = 107/250 (42.80%), Postives = 146/250 (58.40%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEK-ESQDLTQEPDTAETADGGGEMFRRP-- 60
           M PR+ + V    V    +VVEET++V V E+ +   +T+  +  ET D     F  P  
Sbjct: 1   MAPRKPKVV---SVTKKKKVVEETIKVTVTEEGDPCVITETANDQETQD---LTFSIPVG 60

Query: 61  --VPVEEIKSPDPPEQPITHPVSENF-EVRRATDSTSQLTEDTAVTP--------EMEPE 120
             V   EI    P E+ +  PV EN   V+   D   + +     TP           PE
Sbjct: 61  ENVTTVEIPVEVPDERSL--PVGENVTTVKIPVDDRDESSPQPPETPVEVRDEPSPQPPE 120

Query: 121 VQKGKKGGRRKK--KKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQ 180
               K  G  KK  K EKK+E K+ K++ K    +G E Y+RYV+KV+KQVHP++GI+ +
Sbjct: 121 TPASKSEGTLKKTDKVEKKQENKKKKKKKKRDDLAGDE-YRRYVYKVMKQVHPDLGITSK 180

Query: 181 AMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKA 235
           AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+KA
Sbjct: 181 AMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGSKA 240

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BLAST of IVF0018995 vs. ExPASy Swiss-Prot
Match: P54346 (Histone H2B.3 OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=3)

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-27
Identity = 69/143 (48.25%), Postives = 100/143 (69.93%), Query Frame = 0


Query: 89  STSQLTEDTAVTPEMEPEVQK-GKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRY 148
           +T++   +     E +P+ +K GKK  +   KK  K    +G+++ K    S  E YK Y
Sbjct: 10  ATAEAGAEAPAKAEAKPKAEKAGKKAKKEPAKKAAKEPKGDGEKKDKKKKKSAVETYKLY 69

Query: 149 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 208
           ++KVLKQVHP+ GIS +AM I+N+F+ND+F+++A EA+KLS+Y    T++SREIQ AVRL
Sbjct: 70  IYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRL 129

Query: 209 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 130 VLPGELAKHAVSEGTKAVTKFTS 152

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BLAST of IVF0018995 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-27
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 101 PEMEPEVQKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIG 160
           P+ E ++ K   G  +KKKK KK                  E YK Y+FKVLKQVHP++G
Sbjct: 25  PKAEKKISKDAGGSEKKKKKSKK----------------SVETYKIYIFKVLKQVHPDVG 84

Query: 161 ISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAE 220
           ISG+AM I+N+F+ND+F++LA+E++KL++Y    T++SREIQ AVRLVLPGEL KHA++E
Sbjct: 85  ISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSE 138

Query: 221 GTKAVSNYVS 231
           GTKAV+ + S
Sbjct: 145 GTKAVTKFTS 138

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BLAST of IVF0018995 vs. ExPASy Swiss-Prot
Match: Q43216 (Histone H2B.5 OS=Triticum aestivum OX=4565 PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-27
Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 95  EDTAVTPEMEPEVQK---GKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKV 154
           E   V  E +P+ +K   GK GG  KKKK+ K+ +               E YK Y+FKV
Sbjct: 12  EKKPVETEKKPKAEKRVPGKDGGADKKKKKAKKSV---------------ETYKIYIFKV 71

Query: 155 LKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPG 214
           LKQVHP+IGIS +AM I+N+F+ND+F++LA E+ KL++Y    T++SREIQ AVRLVLPG
Sbjct: 72  LKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPG 131

Query: 215 ELGKHAIAEGTKAVSNYVS 231
           EL KHA++EGTKAV+ + S
Sbjct: 132 ELAKHAVSEGTKAVTKFTS 135

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BLAST of IVF0018995 vs. ExPASy Swiss-Prot
Match: P54347 (Histone H2B.4 OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 5.1e-27
Identity = 67/143 (46.85%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 89  STSQLTEDTAVTPEMEPEVQKGKKGGRRKKKKEKKREIK-EGKRRSKNSSGSGREGYKRY 148
           +T++   +     E +P+ +K  K  +++  K+  +E K +G+++ K    S  E YK Y
Sbjct: 10  ATAEAGAEAPAKAEAKPKAEKAAKKAKKEPSKKAAKEPKGDGEKKDKKKKKSAVETYKLY 69

Query: 149 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 208
           ++KVLKQVHP+ GIS +AM I+N+F+ND+F+++A EA+KLS+Y    T++SREIQ AVRL
Sbjct: 70  IYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRL 129

Query: 209 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 130 VLPGELAKHAVSEGTKAVTKFTS 152

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BLAST of IVF0018995 vs. ExPASy TrEMBL
Match: A0A1S3CH74 (histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

Query: 241 L 242
           L
Sbjct: 241 L 241

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BLAST of IVF0018995 vs. ExPASy TrEMBL
Match: A0A0A0LSH9 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.5e-106
Identity = 220/242 (90.91%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKG-GRRKKK 120
           EEIK+   P+QPI+HPVSE+FE+RRATDSTSQLTEDTAVTPEMEP+++KGKKG  RRKKK
Sbjct: 61  EEIKA--HPQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRKGKKGRRRRKKK 120

Query: 121 KEKKREIKEGKRRSKNS-SGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQ 180
           KEKKREIKEGKRRSK S  G GREGYKRYVFKVLKQVHPE+GISGQAMLILNNFMNDMFQ
Sbjct: 121 KEKKREIKEGKRRSKKSGGGGGREGYKRYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQ 180

Query: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKS 240
           RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKS
Sbjct: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKS 240

[Close]

BLAST of IVF0018995 vs. ExPASy TrEMBL
Match: A0A5A7UF12 (Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00860 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.3e-97
Identity = 202/241 (83.82%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE              
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE-------------- 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
                                    RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 -------------------------RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 202

Query: 241 L 242
           L
Sbjct: 241 L 202

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BLAST of IVF0018995 vs. ExPASy TrEMBL
Match: A0A5D3BHX3 (Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00310 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.5e-94
Identity = 197/241 (81.74%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE              
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE-------------- 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
                                         VLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 ------------------------------VLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 197

Query: 241 L 242
           L
Sbjct: 241 L 197

[Close]

BLAST of IVF0018995 vs. ExPASy TrEMBL
Match: A0A6J1FBI7 (histone H2B.6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443927 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.0e-71
Identity = 160/237 (67.51%), Postives = 187/237 (78.90%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRR+VGSVVRTTT+VVEETV VAVVE ESQD+TQEP TAET  GG  +FRR +PV
Sbjct: 1   MPPRRSRRIVGSVVRTTTKVVEETVHVAVVEGESQDVTQEPATAET--GGDGVFRRTIPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           E+         P T PV  + ++ R  DSTS++TED  VT +ME + + G +  R+K +K
Sbjct: 61  ED---------PQTSPVWGDVKLTRPVDSTSEVTEDKDVTGKMESKARDGVRESRKKNEK 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           +K+RE+K      K  SG GREGYKRYVFKVLKQVHPE+GISGQAM+ILNN MNDMF+RL
Sbjct: 121 KKEREVK------KRRSGGGREGYKRYVFKVLKQVHPEVGISGQAMVILNNLMNDMFERL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTK 238
           AEEATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY +R T+
Sbjct: 181 AEEATKLSKYTGGQTLSSREIQGAVKLVFPGELGKHAVAEGTKAVSTYVSYDHRRTQ 220

[Close]

BLAST of IVF0018995 vs. NCBI nr
Match: XP_008462313.1 (PREDICTED: histone H2B type 1-A-like [Cucumis melo])

HSP 1 Score: 447 bits (1151), Expect = 5.29e-158
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

[Close]

BLAST of IVF0018995 vs. NCBI nr
Match: XP_031736247.1 (histone H2B [Cucumis sativus] >KGN64870.1 hypothetical protein Csa_022747 [Cucumis sativus])

HSP 1 Score: 395 bits (1015), Expect = 2.81e-137
Identity = 220/242 (90.91%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRR-KKK 120
           EEIK+   P+QPI+HPVSE+FE+RRATDSTSQLTEDTAVTPEMEP+++KGKKG RR KKK
Sbjct: 61  EEIKAH--PQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRKGKKGRRRRKKK 120

Query: 121 KEKKREIKEGKRRSKNSSGSG-REGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQ 180
           KEKKREIKEGKRRSK S G G REGYKRYVFKVLKQVHPE+GISGQAMLILNNFMNDMFQ
Sbjct: 121 KEKKREIKEGKRRSKKSGGGGGREGYKRYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQ 180

Query: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKS 240
           RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKS
Sbjct: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKS 240

[Close]

BLAST of IVF0018995 vs. NCBI nr
Match: KAA0052101.1 (histone H2B type 1-A-like [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 5.35e-126
Identity = 202/241 (83.82%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE              
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPE-------------- 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
                                    RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 -------------------------RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 202

[Close]

BLAST of IVF0018995 vs. NCBI nr
Match: TYJ98095.1 (histone H2B type 1-A-like [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (906), Expect = 2.36e-121
Identity = 197/241 (81.74%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEV             
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEV------------- 120

Query: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
                                          LKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 -------------------------------LKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 197

[Close]

BLAST of IVF0018995 vs. NCBI nr
Match: XP_038894659.1 (LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida])

HSP 1 Score: 333 bits (854), Expect = 8.24e-113
Identity = 191/238 (80.25%), Postives = 211/238 (88.66%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADG-GGEMFRRPVP 60
           MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +P
Sbjct: 1   MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIP 60

Query: 61  VEEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKK 120
           VEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA TPE+EPEV+ GKKG +RKKK
Sbjct: 61  VEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATPEVEPEVRNGKKGRKRKKK 120

Query: 121 KEKKREIKEGKRRSKNSSGSG-REGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQ 180
            EK     EGKRR K+S G G REGYKRYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQ
Sbjct: 121 MEK-----EGKRRRKSSGGGGGREGYKRYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQ 180

Query: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTT 236
           RLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 181 RLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT 231

[Close]

BLAST of IVF0018995 vs. TAIR 10
Match: AT1G08170.1 (Histone superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 107/250 (42.80%), Postives = 146/250 (58.40%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEK-ESQDLTQEPDTAETADGGGEMFRRP-- 60
           M PR+ + V    V    +VVEET++V V E+ +   +T+  +  ET D     F  P  
Sbjct: 1   MAPRKPKVV---SVTKKKKVVEETIKVTVTEEGDPCVITETANDQETQD---LTFSIPVG 60

Query: 61  --VPVEEIKSPDPPEQPITHPVSENF-EVRRATDSTSQLTEDTAVTP--------EMEPE 120
             V   EI    P E+ +  PV EN   V+   D   + +     TP           PE
Sbjct: 61  ENVTTVEIPVEVPDERSL--PVGENVTTVKIPVDDRDESSPQPPETPVEVRDEPSPQPPE 120

Query: 121 VQKGKKGGRRKK--KKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQ 180
               K  G  KK  K EKK+E K+ K++ K    +G E Y+RYV+KV+KQVHP++GI+ +
Sbjct: 121 TPASKSEGTLKKTDKVEKKQENKKKKKKKKRDDLAGDE-YRRYVYKVMKQVHPDLGITSK 180

Query: 181 AMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKA 235
           AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+KA
Sbjct: 181 AMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGSKA 240

[Close]

BLAST of IVF0018995 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.8e-28
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 101 PEMEPEVQKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIG 160
           P+ E ++ K   G  +KKKK KK                  E YK Y+FKVLKQVHP++G
Sbjct: 25  PKAEKKISKDAGGSEKKKKKSKK----------------SVETYKIYIFKVLKQVHPDVG 84

Query: 161 ISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAE 220
           ISG+AM I+N+F+ND+F++LA+E++KL++Y    T++SREIQ AVRLVLPGEL KHA++E
Sbjct: 85  ISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSE 138

Query: 221 GTKAVSNYVS 231
           GTKAV+ + S
Sbjct: 145 GTKAVTKFTS 138

[Close]

BLAST of IVF0018995 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27
Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 103 MEPEVQKGKKGGRRKKKK---------EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLK 162
           M P+  + K  G++  +K         EKK   + G  + K  S    E YK Y+FKVLK
Sbjct: 1   MAPKAAEKKPAGKKPAEKAPAEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKVLK 60

Query: 163 QVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGEL 222
           QVHP+IGISG+AM I+N+F+ND+F++LA+E+++L++Y    T++SREIQ AVRLVLPGEL
Sbjct: 61  QVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL 120

Query: 223 GKHAIAEGTKAVSNYVS 231
            KHA++EGTKAV+ + S
Sbjct: 121 SKHAVSEGTKAVTKFTS 137

[Close]

BLAST of IVF0018995 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27
Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 97  TAVTPEMEPEVQKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVH 156
           TA    +E      K    +K K  KK   KE   + K  S    E YK Y+FKVLKQVH
Sbjct: 14  TAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVETYKIYIFKVLKQVH 73

Query: 157 PEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKH 216
           P+IGIS +AM I+N+F+ND+F++LA+E++KL++Y    T++SREIQ AVRLVLPGEL KH
Sbjct: 74  PDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKH 133

Query: 217 AIAEGTKAVSNYVS 231
           A++EGTKAV+ + S
Sbjct: 134 AVSEGTKAVTKFTS 147

[Close]

BLAST of IVF0018995 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.9e-27
Identity = 66/123 (53.66%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 108 QKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAML 167
           +K  K G++  K+     +++ K+R K S+    E YK Y+FKVLKQVHP+IGIS +AM 
Sbjct: 32  EKKPKAGKKLPKEAVTGGVEKKKKRVKKST----ETYKIYIFKVLKQVHPDIGISSKAMG 91

Query: 168 ILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSN 227
           I+N+F+ND+F++LA+EA+KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ 
Sbjct: 92  IMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 150

Query: 228 YVS 231
           + S
Sbjct: 152 FTS 150

The following BLAST results are available for this feature:

BLAST of IVF0018995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGE3	2.2e-30	42.80	Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1	[more]
P54346	3.0e-27	48.25	Histone H2B.3 OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=3	[more]
Q9ZUS0	3.9e-27	51.54	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
Q43216	3.9e-27	51.08	Histone H2B.5 OS=Triticum aestivum OX=4565 PE=1 SV=3	[more]
P54347	5.1e-27	46.85	Histone H2B.4 OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=3	[more]

BLAST of IVF0018995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CH74	2.5e-122	100.00	histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1	[more]
A0A0A0LSH9	1.5e-106	90.91	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=...	[more]
A0A5A7UF12	1.3e-97	83.82	Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BHX3	6.5e-94	81.74	Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FBI7	2.0e-71	67.51	histone H2B.6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443927 PE=3...	[more]

BLAST of IVF0018995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462313.1	5.29e-158	100.00	PREDICTED: histone H2B type 1-A-like [Cucumis melo]	[more]
XP_031736247.1	2.81e-137	90.91	histone H2B [Cucumis sativus] >KGN64870.1 hypothetical protein Csa_022747 [Cucum...	[more]
KAA0052101.1	5.35e-126	83.82	histone H2B type 1-A-like [Cucumis melo var. makuwa]	[more]
TYJ98095.1	2.36e-121	81.74	histone H2B type 1-A-like [Cucumis melo var. makuwa]	[more]
XP_038894659.1	8.24e-113	80.25	LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida]	[more]

BLAST of IVF0018995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08170.1	1.6e-31	42.80	Histone superfamily protein	[more]
AT2G37470.1	2.8e-28	51.54	Histone superfamily protein	[more]
AT3G53650.1	4.0e-27	49.64	Histone superfamily protein	[more]
AT1G07790.1	6.8e-27	51.49	Histone superfamily protein	[more]
AT2G28720.1	8.9e-27	53.66	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 185..202 score: 46.4 coord: 144..162 score: 69.92 coord: 163..183 score: 50.75 coord: 202..215 score: 78.23 coord: 215..228 score: 69.32
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 130..230 e-value: 4.9E-45 score: 165.6
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 1..232
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 100..231 e-value: 3.4E-48 score: 164.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 114..230
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 84..207 e-value: 1.5E-19 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..127
None	No IPR available	PANTHER	PTHR23428:SF238	HISTONE H2B.2	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018995.2	IVF0018995.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity