IVF0018990 (gene) Melon (IVF77) v1

Overview
NameIVF0018990
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr11: 17875381 .. 17875566 (+)
RNA-Seq ExpressionIVF0018990
SyntenyIVF0018990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGGGAGCAATCCCTTATCGAAGCCCTTAAGAAGTACCAAGCCACTCTTGGCAAAGCAAGACTGCTTAATGAAGCATTTGAGAATTCTCCAGCTGACGACCCTATGTTGGAGCAAAAAGGAGAAATACAACTTAAAGAAGTTGTTATCAGTGGAGTAAAGATTCAACTACTAGAGGAATAA

mRNA sequence

ATGTCTGGGGAGCAATCCCTTATCGAAGCCCTTAAGAAGTACCAAGCCACTCTTGGCAAAGCAAGACTGCTTAATGAAGCATTTGAGAATTCTCCAGCTGACGACCCTATGTTGGAGCAAAAAGGAGAAATACAACTTAAAGAAGTTGTTATCAGTGGAGTAAAGATTCAACTACTAGAGGAATAA

Coding sequence (CDS)

ATGTCTGGGGAGCAATCCCTTATCGAAGCCCTTAAGAAGTACCAAGCCACTCTTGGCAAAGCAAGACTGCTTAATGAAGCATTTGAGAATTCTCCAGCTGACGACCCTATGTTGGAGCAAAAAGGAGAAATACAACTTAAAGAAGTTGTTATCAGTGGAGTAAAGATTCAACTACTAGAGGAATAA

Protein sequence

MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVKIQLLEE
Homology
BLAST of IVF0018990 vs. ExPASy TrEMBL
Match: A0A5A7V7Z8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003440 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVK 56
          MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISG++
Sbjct: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGIQ 55

BLAST of IVF0018990 vs. ExPASy TrEMBL
Match: A0A5D3C162 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002400 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVK 56
          MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISG++
Sbjct: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGIQ 55

BLAST of IVF0018990 vs. ExPASy TrEMBL
Match: A0A5D3BW29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00040 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVKIQL 59
          M GEQSLIEALKKYQATLG+A   N+  E+SP D PMLE+KGEIQLK VVI+GVKIQL
Sbjct: 1  MFGEQSLIEALKKYQATLGEASPSNKVIEHSPVDGPMLEKKGEIQLKTVVINGVKIQL 58

BLAST of IVF0018990 vs. ExPASy TrEMBL
Match: A0A0A0K8A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.0e-08
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQ-KGEIQLKEVVISGVKIQLL 60
          M G+Q L +ALKKYQAT+GKA   ++  E+SP    +LEQ K EIQLK VVI+GVKIQLL
Sbjct: 1  MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

Query: 61 EE 62
          E+
Sbjct: 61 ED 62

BLAST of IVF0018990 vs. ExPASy TrEMBL
Match: A0A5D3C865 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001870 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.6e-07
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0

Query: 8  IEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVKIQLLEE 62
          ++ALKKYQATLGKA   NEA E+SPA  P+LE+K +I LK V I+ VKIQL E+
Sbjct: 20 LQALKKYQATLGKASPSNEAVEHSPASGPVLEEKEKIPLKIVFINRVKIQLPED 73

BLAST of IVF0018990 vs. NCBI nr
Match: TYK05008.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (263), Expect = 2.35e-27
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVK 55
          MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISG++
Sbjct: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGIQ 55

BLAST of IVF0018990 vs. NCBI nr
Match: KAA0062015.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (263), Expect = 2.35e-27
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVK 55
          MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISG++
Sbjct: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGIQ 55

BLAST of IVF0018990 vs. NCBI nr
Match: KAA0034977.1 (hypothetical protein E6C27_scaffold57G00110 [Cucumis melo var. makuwa] >TYK02319.1 hypothetical protein E5676_scaffold155G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 5.42e-20
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVKIQL 58
          M GEQSLIEALKKYQATLG+A   N+  E+SP D PMLE+KGEIQLK VVI+GVKIQL
Sbjct: 1  MFGEQSLIEALKKYQATLGEASPSNKVIEHSPVDGPMLEKKGEIQLKTVVINGVKIQL 58

BLAST of IVF0018990 vs. NCBI nr
Match: KGN44567.1 (hypothetical protein Csa_016483 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.90e-12
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 1  MSGEQSLIEALKKYQATLGKARLLNEAFENSPADDPMLEQ-KGEIQLKEVVISGVKIQLL 60
          M G+Q L +ALKKYQAT+GKA   ++  E+SP    +LEQ K EIQLK VVI+GVKIQLL
Sbjct: 1  MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

BLAST of IVF0018990 vs. NCBI nr
Match: KAA0048215.1 (hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK08041.1 hypothetical protein E5676_scaffold265G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.26e-10
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0

Query: 8  IEALKKYQATLGKARLLNEAFENSPADDPMLEQKGEIQLKEVVISGVKIQLLEE 61
          ++ALKKYQATLGKA   NEA E+SPA  P+LE+K +I LK V I+ VKIQL E+
Sbjct: 20 LQALKKYQATLGKASPSNEAVEHSPASGPVLEEKEKIPLKIVFINRVKIQLPED 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V7Z81.0e-1996.36Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003... [more]
A0A5D3C1621.0e-1996.36Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00... [more]
A0A5D3BW292.4e-1375.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K8A09.0e-0861.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1[more]
A0A5D3C8657.6e-0762.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK05008.12.35e-2796.36protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0062015.12.35e-2796.36protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0034977.15.42e-2075.86hypothetical protein E6C27_scaffold57G00110 [Cucumis melo var. makuwa] >TYK02319... [more]
KGN44567.11.90e-1261.29hypothetical protein Csa_016483 [Cucumis sativus][more]
KAA0048215.11.26e-1062.96hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK0804... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0018990.1IVF0018990.1mRNA