IVF0018957 (gene) Melon (IVF77) v1

Overview


Name	IVF0018957
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rubredoxin
Location	chr05: 24439236 .. 24441411 (-)
RNA-Seq Expression	IVF0018957
Synteny	IVF0018957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAACCTAACTTCAACATTGTCTAAAACAAATTAAAATCCCACTACCTTATATGATTGAATTACGGTAATAGTGTGTATATTTATATATATATAAACAAACATACTTCAATTGAAATATGAATGTGTTAGTAACCATAAGATCTGTGGTTCAAATCTCTTATTTTAAGTGTACTAAAAAATAGATATTTTGTAATTGACGTTCAACTAGGAAGGGAAATCAAGCTATTAACCATCTCAGAATAGTGATTAGTATCTTAGACATTAAACAATTCTGGAGTTTACATGAGATTATATAGAATCTTAGACTTCTTTTATCAACATTTTTCTACGACTATGAACAAAAATCTTGACCAACTGCCATTCATATTGATTCATAATTGGGCTTTTCATAGTAGATGAGTAAAAATAAAGCCCAATTGAACACACTCCAATCTTCTTCCTTCCCCACCACCACACCTTATCCTCCACCTCCTCTTTCTCTCACAGAAGCGAAAACCAGCATATACCCTTTCCCCATTCCATGGATCCTTCTGATTCTTCTTCTTCTACTTCTTCCTTCTGAATTTCCCTTCTTTTTCAAACACACATACGAAAATCAAAACCTTCAAACACAAATTCCACCTCCATCCATGGCTGTTTATTCCTCAGCTAGACCCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCGTCGCCGCCACCATTCCGCCGTTGCAGAGATTATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCTATCGACGTCTCTAAGGAGGACAAACCCACTTCTGATGACCCAAATACGCCGTCGCCGCCGCCGGTTGTGGCGGTTGAAAAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAGATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCCGTGGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTTGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGAAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTGTTCTTCTTTGCTCTATTCCTCTCCGGCTATTTCTTGCAATGATGGATGAGATTGGATTGATCAATCAGGTACCAAACTCAGTTTATTTAATGAAAAGTTTGTGTGTGTATATATTTGAATTCTCAGTCAAATTAGAAAATAATAATAATAATAATAACAACAACTATATTTGAGCTCTACAGTCGGTGTGTATTAGTTTAATATTCAAAAACCAAACAACAATCCAATAGTCTTAGCTTTTTGCCTTCTAAAAATGGTTAGAATTATTTGGTTCTTTTTTTTCTTTTAGAATTCAATAAATAACATTTAATCGTTTAGTCAAGTATATACATCTTAACTATAACTAGTTGAGTAATGTTTTAGACTGTTAGGTTATAAATTATATTTGTCTTTGATCTTTTTCTTCATTAGCTAGAAAAATCAAAAATTAAAATTGAAAGTAGAGTTCGAACCGAGTAGATAATATTACGAGCACATTGTCACCACTAATGCAAGGTTTCAAAGTCTAATATTTCTAATAAAACCATTTAAAGTTGAAGAATAGAAAGTGAAACTGACATCCCATTATGAAATTTGTAAATTTCTTTTTTCGTCTTGTTGTTTACTTACAAACTCTAATACATAAATTGTGGAATTTCAGGTGGATTGAGTAAAATTTATAAGGGAGTTTGTGTATCATGTTTGGTGAACTCCAAATTCTTACTGAATTCTTTTTGTGTGACAAAACAAACATCATACTGTTGAATCACATAATAAACTTCGCTCTTAATCTTCTTCATCTTGGTGAAGTCATTGAATTCGCCAATGTAATAAGTCATTTTCCATCTGGTCAGGTAAAGAGATAAACACAGCTTTTGGATTGATGGCGAACCACCAAAAATTTTGGGTAAAAACTTGCGATTATATTGAGAGTGACCCACACTTCGATTCTTTATTAAAATGACTTGTTTGTGATGTTTAAAATTTTCTTCAATAATGATATATCCACG

mRNA sequence

CATCAACCTAACTTCAACATTGTCTAAAACAAATTAAAATCCCACTACCTTATATGATTGAATTACGGTAATAGTGTGTATATTTATATATATATAAACAAACATACTTCAATTGAAATATGAATGTGTTAGTAACCATAAGATCTGTGGTTCAAATCTCTTATTTTAAGTGTACTAAAAAATAGATATTTTGTAATTGACGTTCAACTAGGAAGGGAAATCAAGCTATTAACCATCTCAGAATAGTGATTAGTATCTTAGACATTAAACAATTCTGGAGTTTACATGAGATTATATAGAATCTTAGACTTCTTTTATCAACATTTTTCTACGACTATGAACAAAAATCTTGACCAACTGCCATTCATATTGATTCATAATTGGGCTTTTCATAGTAGATGAGTAAAAATAAAGCCCAATTGAACACACTCCAATCTTCTTCCTTCCCCACCACCACACCTTATCCTCCACCTCCTCTTTCTCTCACAGAAGCGAAAACCAGCATATACCCTTTCCCCATTCCATGGATCCTTCTGATTCTTCTTCTTCTACTTCTTCCTTCTGAATTTCCCTTCTTTTTCAAACACACATACGAAAATCAAAACCTTCAAACACAAATTCCACCTCCATCCATGGCTGTTTATTCCTCAGCTAGACCCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCGTCGCCGCCACCATTCCGCCGTTGCAGAGATTATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCTATCGACGTCTCTAAGGAGGACAAACCCACTTCTGATGACCCAAATACGCCGTCGCCGCCGCCGGTTGTGGCGGTTGAAAAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAGATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCCGTGGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTTGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGAAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTGTTCTTCTTTGCTCTATTCCTCTCCGGCTATTTCTTGCAATGATGGATGAGATTGGATTGATCAATCAGGTGGATTGAGTAAAATTTATAAGGGAGTTTGTGTATCATGTTTGGTGAACTCCAAATTCTTACTGAATTCTTTTTGTGTGACAAAACAAACATCATACTGTTGAATCACATAATAAACTTCGCTCTTAATCTTCTTCATCTTGGTGAAGTCATTGAATTCGCCAATGTAATAAGTCATTTTCCATCTGGTCAGGTAAAGAGATAAACACAGCTTTTGGATTGATGGCGAACCACCAAAAATTTTGGGTAAAAACTTGCGATTATATTGAGAGTGACCCACACTTCGATTCTTTATTAAAATGACTTGTTTGTGATGTTTAAAATTTTCTTCAATAATGATATATCCACG

Coding sequence (CDS)

ATGAGTAAAAATAAAGCCCAATTGAACACACTCCAATCTTCTTCCTTCCCCACCACCACACCTTATCCTCCACCTCCTCTTTCTCTCACAGAAGCGAAAACCAGCATATACCCTTTCCCCATTCCATGGATCCTTCTGATTCTTCTTCTTCTACTTCTTCCTTCTGAATTTCCCTTCTTTTTCAAACACACATACGAAAATCAAAACCTTCAAACACAAATTCCACCTCCATCCATGGCTGTTTATTCCTCAGCTAGACCCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCGTCGCCGCCACCATTCCGCCGTTGCAGAGATTATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCTATCGACGTCTCTAAGGAGGACAAACCCACTTCTGATGACCCAAATACGCCGTCGCCGCCGCCGGTTGTGGCGGTTGAAAAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAGATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCCGTGGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTTGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGAAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTGTTCTTCTTTGCTCTATTCCTCTCCGGCTATTTCTTGCAATGA

Protein sequence

MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFFFKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ

Homology

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BLAST of IVF0018957 vs. ExPASy Swiss-Prot
Match: P73068 (Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.9e-19
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 166 KRRLEERFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSF 225
           +R  E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +++
Sbjct: 3   ERPPEKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNY 62

Query: 226 FESKSVEIA--GFAQNQQYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGY 274
           F S     A  GFA+N  YG G N ++ G+K +LI+GSL   F  FLS Y
Sbjct: 63  FISTGETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

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BLAST of IVF0018957 vs. ExPASy Swiss-Prot
Match: Q9XBL8 (Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rub PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 174 AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 233
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGP 64

Query: 234 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 277
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

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BLAST of IVF0018957 vs. ExPASy Swiss-Prot
Match: Q9WWN1 (Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rub PE=3 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 174 AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 233
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGP 64

Query: 234 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 277
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

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BLAST of IVF0018957 vs. ExPASy Swiss-Prot
Match: Q9FDN6 (High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=hrb PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11
Identity = 33/80 (41.25%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 148 TPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPF 207
           TP   P   V +E++K            L +  Y+C  C + +D   GDP + IAPG PF
Sbjct: 158 TPKTAPTFTVGREKDK----------TALASPKYQCTICNYVYDPVQGDPEHGIAPGTPF 217

Query: 208 EQLPEDWRCPTCGAAKSFFE 228
             LPEDW CP CGA K  FE
Sbjct: 218 ADLPEDWTCPICGAGKDAFE 227

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BLAST of IVF0018957 vs. ExPASy Swiss-Prot
Match: P00270 (Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 180 IYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK 230
           IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52

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BLAST of IVF0018957 vs. ExPASy TrEMBL
Match: A0A1S4E0U3 (uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.4e-153
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF 60
           MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF
Sbjct: 1   MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF 60

Query: 61  FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS 120
           FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS
Sbjct: 61  FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS 120

Query: 121 AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI 180
           AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI
Sbjct: 121 AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI 180

Query: 181 YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ 240
           YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ
Sbjct: 181 YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ 240

Query: 241 QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 277
           QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ
Sbjct: 241 QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 276

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BLAST of IVF0018957 vs. ExPASy TrEMBL
Match: A0A5A7VDM5 (Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.6e-107
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 79  MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 138
           MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE
Sbjct: 1   MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 60

Query: 139 DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 198
           DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT
Sbjct: 61  DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 120

Query: 199 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 258
           YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI
Sbjct: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180

Query: 259 YGSLLFFFALFLSGYFLQ 277
           YGSLLFFFALFLSGYFLQ
Sbjct: 181 YGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of IVF0018957 vs. ExPASy TrEMBL
Match: E5GBR8 (Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.6e-107
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 79  MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 138
           MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE
Sbjct: 1   MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 60

Query: 139 DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 198
           DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT
Sbjct: 61  DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 120

Query: 199 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 258
           YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI
Sbjct: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180

Query: 259 YGSLLFFFALFLSGYFLQ 277
           YGSLLFFFALFLSGYFLQ
Sbjct: 181 YGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of IVF0018957 vs. ExPASy TrEMBL
Match: A0A0A0LJE4 (Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G012140 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.7e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 79  MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 138
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60

Query: 139 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 198
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120

Query: 199 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 258
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 259 VLIYGSLLFFFALFLSGYFLQ 277
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 181 VLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of IVF0018957 vs. ExPASy TrEMBL
Match: A0A6J1G4B1 (uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC111450624 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.3e-87
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 80  AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 139
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63

Query: 140 KPTSDDPNTPSPPPVVAVE--KEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDP 199
           KPTSDDP+  +   VV  E    EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 64  KPTSDDPDFAA---VVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 123

Query: 200 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 259
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 124 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 183

Query: 260 IYGSLLFFFALFLSGYFLQ 277
           IYG+L FFFALFLSGYFLQ
Sbjct: 184 IYGTLFFFFALFLSGYFLQ 198

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BLAST of IVF0018957 vs. NCBI nr
Match: XP_016901839.1 (PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo])

HSP 1 Score: 547 bits (1409), Expect = 3.67e-196
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF 60
           MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF
Sbjct: 1   MSKNKAQLNTLQSSSFPTTTPYPPPPLSLTEAKTSIYPFPIPWILLILLLLLLPSEFPFF 60

Query: 61  FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS 120
           FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS
Sbjct: 61  FKHTYENQNLQTQIPPPSMAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLS 120

Query: 121 AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI 180
           AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI
Sbjct: 121 AARPISIFTLNSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGI 180

Query: 181 YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ 240
           YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ
Sbjct: 181 YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQ 240

Query: 241 QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 276
           QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ
Sbjct: 241 QYGLGGNTLTSGQKAVLIYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of IVF0018957 vs. NCBI nr
Match: ADN33910.1 (rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var. makuwa] >TYK18397.1 rubredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1020), Expect = 4.15e-138
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 79  MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 138
           MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE
Sbjct: 1   MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKE 60

Query: 139 DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 198
           DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT
Sbjct: 61  DKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPT 120

Query: 199 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 258
           YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI
Sbjct: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180

Query: 259 YGSLLFFFALFLSGYFLQ 276
           YGSLLFFFALFLSGYFLQ
Sbjct: 181 YGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of IVF0018957 vs. NCBI nr
Match: XP_004139218.2 (uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648771.1 uncharacterized protein LOC101219075 [Cucumis sativus] >KGN60832.1 hypothetical protein Csa_019394 [Cucumis sativus])

HSP 1 Score: 370 bits (949), Expect = 3.01e-127
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 79  MAVYSSARPT-LSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 138
           MAVYSSARPT LSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60

Query: 139 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 198
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120

Query: 199 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 258
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 259 VLIYGSLLFFFALFLSGYFLQ 276
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 181 VLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of IVF0018957 vs. NCBI nr
Match: XP_038891199.1 (rubredoxin [Benincasa hispida])

HSP 1 Score: 367 bits (942), Expect = 4.03e-126
Identity = 186/206 (90.29%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 79  MAVYSSARPTLSFHLSQPSLPIPRFNFKPPVAAT--------IPPLQRLSAARPISIFTL 138
           MA YSSARPTLSFHLSQPSLPIPRFNFKPP +A+        +PPLQR +AARP SIFTL
Sbjct: 1   MAAYSSARPTLSFHLSQPSLPIPRFNFKPPASASAAAATVPAVPPLQRSAAARPNSIFTL 60

Query: 139 NSIDVSKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKF 198
           NSIDVSKEDKPTSDDPNTPSPPPVVAV+ EEEKFDKRRLEE+FAVLNTGIYECRSCGHKF
Sbjct: 61  NSIDVSKEDKPTSDDPNTPSPPPVVAVD-EEEKFDKRRLEEKFAVLNTGIYECRSCGHKF 120

Query: 199 DEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLT 258
           DEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLT
Sbjct: 121 DEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLT 180

Query: 259 SGQKAVLIYGSLLFFFALFLSGYFLQ 276
           SGQKAVLIYGSL FFFALFLSGYFLQ
Sbjct: 181 SGQKAVLIYGSLFFFFALFLSGYFLQ 205

[Close]

BLAST of IVF0018957 vs. NCBI nr
Match: XP_023545844.1 (uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333 bits (855), Expect = 5.70e-113
Identity = 167/197 (84.77%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 80  AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 139
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63

Query: 140 KPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPTY 199
           KPTS+DP+  +     A E  EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDPTY
Sbjct: 64  KPTSEDPDLAAVVGEEAAEAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTY 123

Query: 200 PIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIY 259
           PIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIY
Sbjct: 124 PIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIY 183

Query: 260 GSLLFFFALFLSGYFLQ 276
           G+L FFFALFLSGYFLQ
Sbjct: 184 GTLFFFFALFLSGYFLQ 199

[Close]

BLAST of IVF0018957 vs. TAIR 10
Match: AT1G54500.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-51
Identity = 100/143 (69.93%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 135 VSKEDKPTSDDPNTPSPPPVVAVEKE-EEKFDKRRLEERFAVLNTGIYECRSCGHKFDEA 194
           VS++D  T   P + S        KE E+  +KRR+EE+FAVLNTGIYECRSCG+K+DE+
Sbjct: 56  VSRDDAAT---PLSSSDQTQETETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKYDES 115

Query: 195 VGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQ 254
            GDP+YPI PG  F++LPEDWRCPTCGAA+SFFESK VEIAGFAQNQQYGLGGN LTSGQ
Sbjct: 116 AGDPSYPIPPGFQFDKLPEDWRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALTSGQ 175

Query: 255 KAVLIYGSLLFFFALFLSGYFLQ 277
           K  LI+GSLL FFALFLSGYF+Q
Sbjct: 176 KTGLIFGSLLLFFALFLSGYFIQ 195

The following BLAST results are available for this feature:

BLAST of IVF0018957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73068	9.9e-19	42.73	Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=...	[more]
Q9XBL8	1.1e-17	45.79	Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=...	[more]
Q9WWN1	1.9e-17	45.79	Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=...	[more]
Q9FDN6	4.5e-11	41.25	High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / ...	[more]
P00270	1.3e-10	54.00	Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1	[more]

BLAST of IVF0018957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0U3	5.4e-153	100.00	uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=...	[more]
A0A5A7VDM5	1.6e-107	100.00	Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE...	[more]
E5GBR8	1.6e-107	100.00	Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0LJE4	2.7e-99	94.03	Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G01...	[more]
A0A6J1G4B1	2.3e-87	84.92	uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]

BLAST of IVF0018957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901839.1	3.67e-196	100.00	PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 P...	[more]
ADN33910.1	4.15e-138	100.00	rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var...	[more]
XP_004139218.2	3.01e-127	94.03	uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharact...	[more]
XP_038891199.1	4.03e-126	90.29	rubredoxin [Benincasa hispida]	[more]
XP_023545844.1	5.70e-113	84.77	uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0018957 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54500.1	2.0e-51	69.93	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PRINTS	PR00163	RUBREDOXIN	coord: 210..226 score: 57.12 coord: 180..196 score: 44.12
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 181..226 e-value: 3.2E-17 score: 62.3
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 181..227 e-value: 2.36797E-22 score: 85.4354
None	No IPR available	GENE3D	2.20.28.10		coord: 174..228 e-value: 2.0E-21 score: 77.4
None	No IPR available	PIRSR	PIRSR000071-1	PIRSR000071-1	coord: 181..228 e-value: 1.6E-18 score: 64.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR47627	RUBREDOXIN	coord: 74..276
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 177..243
IPR018527	Rubredoxin, iron-binding site	PROSITE	PS00202	RUBREDOXIN	coord: 210..220
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 178..229 score: 13.153681

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018957.1	IVF0018957.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043448	alkane catabolic process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046872	metal ion binding