IVF0018910 (gene) Melon (IVF77) v1

Overview


Name	IVF0018910
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	chr05: 25544799 .. 25547970 (-)
RNA-Seq Expression	IVF0018910
Synteny	IVF0018910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATCACACACTGCAGAAGCAGAGCGTTAAGCTCATCAGAAAAACTTCTGAATTTCACTCATCAAGAACAAATTCAAATTCCCAAAACCCCCATTTAAATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCCAGCAATCCCAAACCCGGTATCTTCTTCTCCAAATCAGCTATTCATGCATTTTTCTTTGTTCTGCTTTTGTTTCTCTTTTAAAATGTGTTTATGGCCCTTTCTTTTCGCATTTTGTAGGGGTTCTTGTTGGAAATTCAGTGCCTCAGAAGGCTTTTAGGATGAATGAGGCGGTTCAAAGAACAAACCCCATTAGGCATTTGTCTTTTGAAGCCAAGGTATGGTTTCTTTGGGCATTTCTTTCCTATTTTACTTTTTTTAAGTGAAATGAACTTGTTTGTTTATGGTTGTTTTGTGGATAAGTTGTTGGGATTTTAGTGGATTGTGGACCTGGAAATTATGGAATAGTCTTTCATTCTCTACTGCCTGTCTTTGGCTAAGGGTTTTGTTAAGAAATCAACAAATAAAGACGAATAGAAAAGGTAAAGCAATGGAGAATCCTAGTGTAGCTATGTTAGTCAGAGGGAGAGAACAATTTTATTAGACAAAATAGTTCACTAGCTTACGAGTGGAAATGTTCGTTTGAATAACCATTAACTAGGTTGGTGAATATTAACTGGTTTTAATGTCGGTTTTGGCTTAAAATAAATCCAATTCAACCTAATTACACCTTTTTTCTTATAAGAAACCAAGATTTCATCGAACAAAATGAAAGAATACACAAAGTCATGCAAAAACAAACAAGCCCAGAAGAATAGGGGACACAATAATAGGACCTCGTAAGCTGCTCACTATTGAACTACATGAAGAAGAACACAGTTTACTATTCTTTTTCAGTTTCTCAGAACATGTTTTCTTCTTGGTTTGGCAGGCTTCAGATGGTGCGGATAGTAAACAAACGACAAAATACAAAAGCATAGTTTGCACTGATTGCGATGGAAATGGTATGTATAGAAACTGGAGACCTCCATCTTTATTCCTTCAGTTAATATTTGTTTCTTCACTTTCTGTCAAGCTTTTGAATGGTACAAAATTATAAGTCATGAACTCTTAGAAAGGTCGAGGTAACTGAATGAAAGTTCTCTCCTATCCAAAAAGAAAAAATTGTAACAAATCAACTGTAAGTGTGACTATGTTCTCTTGATTATTATGCAAAGACTGGTAGAACTTGATTTTGTACAGTTCCAAGCACTTTTGATCGAATTCAGAAGAAAACAAATATGGTTGGAAATAGATAATAGATTTTGAGAGAGCTGGGAAATAATGATAAACTTTGGTCTCAATTCATTCAATATTTTACAGAAAATATACATTGTATGTTCTTGAATGGAAGGAATAAGAGTCAACATGAGCAAAACTCAACTGAAATGAATTTATACTATTTGCCTCGAGGTGTGAGATTTGATTCCTCTTCCCAGTTATTGTAATATAAACAAAGGAATAAAAATAACAATGTAAAGATTTTGCAAGCTCTATGTTCGAGGATGATAATATATTTGTCTTCTTACACTATATTATTCAAATCATATCAGATTTTAGTTCCAAGTATTGCATAAGAAACAATTGGAACTCAACTTATAAGAAAGATAAACCGATCTAAAACTTCTAAGCAATAAGAACCATAATAAAATCACGATAAAGGAGGAGAAATGAACACCGAATTTATATTGGTTCATCCAATGTGGCTACATCTACCTCTTTTGCTGATGCAAGTTTCACTTAAATGCCAAGGAGAAAATGTACACGAGTCTATAACTGCTTAATAATGATTTATCTTCTCAGGAATCACTCTACAAAAGCTCATAAAACTCTATAATAGGAGTATGGAAACATTGCTGCAAACCCAAATAAAGTGGATCTGTTATCTCTCGTTTTATTTTCAATATGACAATCACACAGCCCCACTTGAACAAAATTAAGAGATTAAACAAGCATGGAGACTGAGTTTACCTATAATTTTTTCTCAATTTTTAGGTGCTGTCCTATGTTCTCAGTGCAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGGTATTGATGAACAAACTCTCCTTGATCATAATGTTATTTTGTCTACCTTACCTATTACTTGACTTCATTCTAGAGGTTTAAATTATAAAGACATGTAAATCAAAATGGAAGGTTAGAATTACTAGAGTCGAACATTGAGATAACTTGCAAGCAACAGGGTGGACAAAATGAGTGATTAAGCTTGCGTCTAATTCTTGCAAATATAAGTTGAACAATTTGTAAGTTTTATTACAAGGGGATATCTAGCTCACAAACTAGGCAATTGTGATCAGAAAAGTCGAGTTTACGTTATGTGAACTCACTGCCGTGTGCCCTTATCCTAGGTATGTGTTTATAAATTCCTCGACTTGCATTTACTATTAGTTCAATAACATATGGAATGTGAGGATTCGAACCTACCACTACTTAGCCATGCTATATGTCTAAAACAACTTGAGTTGACATAAATCTTTATGCTTATGATCAACTAGCCAAGTCTATTTACATTGCATTTGTTATAAATCAAGCCATTTCAATCACAACCATTGTTTCTTTCAAGATGTCCAATAGATTTTCTTGAAAGAATTAACGATAGAGATTATATTATCCTTTTTGTTAATGATTAAATTTGAGTTTCTTTACTAGTTAATGTCTTTAACATTGCAGAGGCAAAAGGGATGTCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAGTAGTTTGTATTGCGAAGTATGAGTTTTCTTTCACCAAGTCAATTTATGGGTTGCGTGAGATGGAAAGACATACTAGTTTCAGTAATTTTGTATAATGGTTCATATAATTCCCAAGCTTGTAATTGAAATTATGAATGTTTTTTCTGCTATTCACCATTTGTTTTGTTGCATTCCCCTGAATTTTTGAGATCTTTGAGATGTAGTATATGACTACCATATACTTTTTAGGTTTGTTAATGGTAAAATAAATACTATAAGATGTTAAAATGTTGTAGAATGAGGCAGTGA

mRNA sequence

CTAAAATCACACACTGCAGAAGCAGAGCGTTAAGCTCATCAGAAAAACTTCTGAATTTCACTCATCAAGAACAAATTCAAATTCCCAAAACCCCCATTTAAATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCCAGCAATCCCAAACCCGGGGTTCTTGTTGGAAATTCAGTGCCTCAGAAGGCTTTTAGGATGAATGAGGCGGTTCAAAGAACAAACCCCATTAGGCATTTGTCTTTTGAAGCCAAGGCTTCAGATGGTGCGGATAGTAAACAAACGACAAAATACAAAAGCATAGTTTGCACTGATTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGCAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATGTCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAGTAGTTTGTATTGCGAAGTATGAGTTTTCTTTCACCAAGTCAATTTATGGGTTGCGTGAGATGGAAAGACATACTAGTTTCAGTAATTTTGTATAATGGTTCATATAATTCCCAAGCTTGTAATTGAAATTATGAATGTTTTTTCTGCTATTCACCATTTGTTTTGTTGCATTCCCCTGAATTTTTGAGATCTTTGAGATGTAGTATATGACTACCATATACTTTTTAGGTTTGTTAATGGTAAAATAAATACTATAAGATGTTAAAATGTTGTAGAATGAGGCAGTGA

Coding sequence (CDS)

ATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCCAGCAATCCCAAACCCGGGGTTCTTGTTGGAAATTCAGTGCCTCAGAAGGCTTTTAGGATGAATGAGGCGGTTCAAAGAACAAACCCCATTAGGCATTTGTCTTTTGAAGCCAAGGCTTCAGATGGTGCGGATAGTAAACAAACGACAAAATACAAAAGCATAGTTTGCACTGATTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGCAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATGTCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAG

Protein sequence

MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCGGCNGAGFVGGFMSTADS

Homology

[Close]

BLAST of IVF0018910 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-32
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 1   MAFSIC--SSTP-ICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKAS 60
           MA S+C  SS P  C  + S NPKP      +    +      + +T+  R  SFE KA+
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQTS--RSQSFEVKAA 60

Query: 61  DGADSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDV 120
           +  ++ Q TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG LCWLCRGK++V
Sbjct: 61  N--NNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEV 120

Query: 121 LCGGCNGAGFVGGFMSTAD 137
           LCG CNGAGF+GGF+ST D
Sbjct: 121 LCGDCNGAGFIGGFLSTFD 135

[Close]

BLAST of IVF0018910 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.0e-29
Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 48  RHLSFEAKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGG 107
           ++L  + KA++   S K+  K KSI+C DC+GNGA++C++C+G GVNSVD+F G+FKAG 
Sbjct: 36  KNLCIKTKATENDQSAKKHQKVKSILCQDCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGS 95

Query: 108 LCWLCRGKRDVLCGGCNGAGFVGGFMSTAD 137
           LCWLCRGKR++LCG CNGAGF+GGF+ST D
Sbjct: 96  LCWLCRGKREILCGNCNGAGFLGGFLSTFD 125

[Close]

BLAST of IVF0018910 vs. ExPASy TrEMBL
Match: A0A5A7V544 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00260 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.6e-75
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. ExPASy TrEMBL
Match: A0A1S3C5F0 (uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.6e-75
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. ExPASy TrEMBL
Match: A0A0A0LFZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 129/137 (94.16%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFR+NEA Q+TN IR LSFE KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DSKQTTKYKSIVCTDCDGNGAV CSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 138
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. ExPASy TrEMBL
Match: A0A6J1FIB2 (uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC111444376 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.1e-61
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLC 120
            S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRD+LC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of IVF0018910 vs. ExPASy TrEMBL
Match: A0A6J1HSG2 (uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MA+SICSSTPI SFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA
Sbjct: 1   MAYSICSSTPIFSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLC 120
           DS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRD+LC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 138
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of IVF0018910 vs. NCBI nr
Match: XP_008457580.1 (PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa] >TYJ97816.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (745), Expect = 1.56e-99
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADS 137
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. NCBI nr
Match: XP_004139310.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 hypothetical protein Csa_019244 [Cucumis sativus])

HSP 1 Score: 275 bits (703), Expect = 3.99e-93
Identity = 129/137 (94.16%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFR+NEA Q+TN IR LSFE KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DSKQTTKYKSIVCTDCDGNGAV CSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 137
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. NCBI nr
Match: XP_038889638.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 265 bits (678), Expect = 2.59e-89
Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MAFS CSSTPICSFNHSS P  GVL+GNSVPQKAFR+N+A QRTNPIR LSFE KASDGA
Sbjct: 1   MAFSTCSSTPICSFNHSSKPNSGVLLGNSVPQKAFRINKAFQRTNPIRLLSFEVKASDGA 60

Query: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120
           DS QTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG LCWLCRGKRD+LCG
Sbjct: 61  DSNQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGSLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADS 137
           GCNGAGFVGGFMSTADS
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of IVF0018910 vs. NCBI nr
Match: KAG6586393.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247 bits (631), Expect = 3.95e-82
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLC 120
           DS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRD+LC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 137
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of IVF0018910 vs. NCBI nr
Match: XP_022938233.1 (uncharacterized protein LOC111444376 [Cucurbita moschata])

HSP 1 Score: 244 bits (624), Expect = 4.61e-81
Identity = 116/138 (84.06%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60
           MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  DS-KQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLC 120
            S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRD+LC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADS 137
           GGCNGAGFVGGFMSTADS
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of IVF0018910 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-33
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 1   MAFSIC--SSTP-ICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKAS 60
           MA S+C  SS P  C  + S NPKP      +    +      + +T+  R  SFE KA+
Sbjct: 1   MANSLCFFSSPPTFCFQSPSKNPKPSHFFSTNDNTSSLVQKRELLQTS--RSQSFEVKAA 60

Query: 61  DGADSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDV 120
           +  ++ Q TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG LCWLCRGK++V
Sbjct: 61  N--NNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEV 120

Query: 121 LCGGCNGAGFVGGFMSTAD 137
           LCG CNGAGF+GGF+ST D
Sbjct: 121 LCGDCNGAGFIGGFLSTFD 135

[Close]

BLAST of IVF0018910 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.5e-04
Identity = 24/59 (40.68%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 73  CTDCDGNGAVLCSQCKGTG--VNSVDHFNGQFKAGGLCWLCRGKRDVLCGGCNGAGFVG 130
           CT C+  GA+LCS C GTG  V+S+    G       C  C G  +++C  C G G VG
Sbjct: 96  CTCCEAKGALLCSTCSGTGLYVDSIMESQG-IIVKVRCLGCGGSGNIMCKLCGGRGHVG 153

The following BLAST results are available for this feature:

BLAST of IVF0018910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN73	3.0e-32	52.52	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9XF14	9.0e-29	61.11	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=...	[more]

BLAST of IVF0018910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V544	6.6e-75	100.00	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C5F0	6.6e-75	100.00	uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=...	[more]
A0A0A0LFZ2	4.9e-70	94.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1	[more]
A0A6J1FIB2	7.1e-61	84.06	uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A6J1HSG2	2.1e-60	84.06	uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718...	[more]

BLAST of IVF0018910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457580.1	1.56e-99	100.00	PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 cha...	[more]
XP_004139310.1	3.99e-93	94.16	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 h...	[more]
XP_038889638.1	2.59e-89	90.51	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]	[more]
KAG6586393.1	3.95e-82	84.78	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022938233.1	4.61e-81	84.06	uncharacterized protein LOC111444376 [Cucurbita moschata]	[more]

BLAST of IVF0018910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47650.1	2.1e-33	52.52	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT5G17840.1	3.5e-04	40.68	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852:SF65	PROTEIN P13.9, PUTATIVE-RELATED	coord: 1..130
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 1..130
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 65..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018910.2	IVF0018910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0101031	chaperone complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0044183	protein folding chaperone