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IVF0018800 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCTGAGGGCAAGCCTCGTTTTGCTAAGTTCTACGATTTTCAGGTTCCCTTTGGGATCTATGTTAATTTTTTTGTACTGTTTGGGCCATTTCTATCGAATGATCTGTCTGATAATGAATTCATGAATCCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGGTTGGCAATTCTATATTTAATATTTCCAATTAGAATTTTGTAAATTACTAAAATGGTCAGTGGTATTTCCACTATTGTAACTATGGTTTCTTTAACTTGTATTTCTATTTTGATATCTTTTATTTCCTGTTTTGGTACAGTACTTTGCAGTCAAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGTAATATTTCCTTGTCCAATAATTTTCTTATAGTAGTTGTGTTTAGAATGTACTTGAATTGATGATTCTTTGAGAAGCTAGAAACTTGTCAAAAATGAATGTTGGTTGGTATTGTTCAATAAGTTGTAGTACAATTATAGAGTGGGCTAGGCTAGTTGATTAGTGGGACTGGCAAATGCTAATGAGTTATAACAGATAAACTAGTTTTATGTGGCTCCTTGTATCGGAATTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACTTGATACAAGGTTTTTCCAATATTTTATGTGATGGATTTGTGACCTCTAGATTACTTATTATGGAAATGTTACAAGGCATCTAA ATGAATTCTGAGGGCAAGCCTCGTTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGTACTTTGCAGTCAAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGTTTTATGTGGCTCCTTGTATCGGAATTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACTTGATACAAGGTTTTTCCAATATTTTATGTGATGGATTTGTGACCTCTAGATTACTTATTATGGAAATGTTACAAGGCATCTAA ATGAATTCTGAGGGCAAGCCTCGTTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGTACTTTGCAGTCAAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGTTTTATGTGGCTCCTTGTATCGGAATTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACTTGATACAAGGTTTTTCCAATATTTTATGTGATGGATTTGTGACCTCTAGATTACTTATTATGGAAATGTTACAAGGCATCTAA MNSEGKPRFAKFYDFQPIEKQQELIRSVYGVLCSQAENISNFVEAESIFGSFYVAPCIGIATLYFVLVFNSSENELAMLDLIQGFSNILCDGFVTSRLLIMEMLQGI Homology
BLAST of IVF0018800 vs. ExPASy Swiss-Prot
Match: Q8VZ37 (AP-3 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=At3g50860 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.0e-24 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy Swiss-Prot
Match: Q1JQA3 (AP-3 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-11 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy Swiss-Prot
Match: P59780 (AP-3 complex subunit sigma-2 OS=Homo sapiens OX=9606 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-11 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy Swiss-Prot
Match: Q8BSZ2 (AP-3 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap3s2 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-11 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy Swiss-Prot
Match: Q5RDP9 (AP-3 complex subunit sigma-2 OS=Pongo abelii OX=9601 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-11 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy TrEMBL
Match: A0A0A0KRY4 (AP complex subunit sigma OS=Cucumis sativus OX=3659 GN=Csa_5G628680 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 90/107 (84.11%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy TrEMBL
Match: A0A5D3E4J0 (AP complex subunit sigma OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00260 PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 7.3e-37 Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy TrEMBL
Match: A0A5A7UR76 (AP-3 complex subunit sigma OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1359G00170 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30 Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy TrEMBL
Match: A0A1S3BT37 (AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103493438 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 74/89 (83.15%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of IVF0018800 vs. ExPASy TrEMBL
Match: A0A1S3CL75 (AP-3 complex subunit sigma-like OS=Cucumis melo OX=3656 GN=LOC103502239 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 73/93 (78.49%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of IVF0018800 vs. NCBI nr
Match: TYK30832.1 (AP-3 complex subunit sigma-like [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (408), Expect = 5.30e-49 Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of IVF0018800 vs. NCBI nr
Match: KAA0058373.1 (AP-3 complex subunit sigma [Cucumis melo var. makuwa] >TYK23419.1 AP-3 complex subunit sigma [Cucumis melo var. makuwa]) HSP 1 Score: 139 bits (351), Expect = 4.43e-40 Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of IVF0018800 vs. NCBI nr
Match: XP_008452384.1 (PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452386.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452387.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452388.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452389.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452390.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452391.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_016901330.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo]) HSP 1 Score: 138 bits (347), Expect = 4.85e-39 Identity = 73/85 (85.88%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of IVF0018800 vs. NCBI nr
Match: XP_008464326.1 (PREDICTED: AP-3 complex subunit sigma-like [Cucumis melo]) HSP 1 Score: 138 bits (348), Expect = 5.02e-39 Identity = 74/97 (76.29%), Postives = 81/97 (83.51%), Query Frame = 0
BLAST of IVF0018800 vs. NCBI nr
Match: XP_023003840.1 (AP-3 complex subunit sigma-like [Cucurbita maxima]) HSP 1 Score: 132 bits (331), Expect = 1.42e-37 Identity = 68/84 (80.95%), Postives = 72/84 (85.71%), Query Frame = 0
BLAST of IVF0018800 vs. TAIR 10
Match: AT3G50860.1 (Clathrin adaptor complex small chain family protein ) HSP 1 Score: 112.1 bits (279), Expect = 2.8e-25 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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