IVF0018705 (gene) Melon (IVF77) v1

Overview


Name	IVF0018705
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pectinesterase-like
Location	chr01: 23766591 .. 23767095 (-)
RNA-Seq Expression	IVF0018705
Synteny	IVF0018705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATTAACGACGATGTTAGTAAACGAGACAAGATTGGTCTTCATGATTGTGTTGAAACAACCGACAGGACGATTTATGAGCTTGGCAAAGCTATAGAGGTCTTTCGTGAGTATCCGAACAAGGGATCTCTTACTTCGTACGCCAATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGTTTGCAAATTCATCTACCATCTTGATTATCTTGCTCATTTTGAAGTTAATAATATATATTGTGTACCTTTTTATTTTTGGTTCAGGTGACTTGTTTGGATGGATTATCACATGACAAAACAGAGAAAGAGTTTTGAGACTTATTGAGAACGCACATATTCATGTGACAAATTTGTGTAGTAATGCATTGGCTTTGGTTAAAAAATTGACAGAACAAGACGAGAAAAGCTTGGTGGTCCATGATTTCCCTTATAAGATAGCATCCGTACCCTCCATAGATGACCCCAAAATTATACTCATTTCCAACCAGGTATAA

mRNA sequence

ATGTCCATTAACGACGATGTTAGTAAACGAGACAAGATTGGTCTTCATGATTGTGTTGAAACAACCGACAGGACGATTTATGAGCTTGGCAAAGCTATAGAGGTCTTTCGTGAGTATCCGAACAAGGGATCTCTTACTTCGTACGCCAATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGTTTGCAAATTCATCTACCATCTTGATTATCTTGCTCATTTTGAAGTTAATAATATATATTGTGTACCTTTTTATTTTTGGTTCAGAGAAAGAGTTTTGAGACTTATTGAGAACGCACATATTCATGTGACAAATTTGTGTAGTAATGCATTGGCTTTGGTTAAAAAATTGACAGAACAAGACGAGAAAAGCTTGGTGGTCCATGATTTCCCTTATAAGATAGCATCCGTACCCTCCATAGATGACCCCAAAATTATACTCATTTCCAACCAGGTATAA

Coding sequence (CDS)

ATGTCCATTAACGACGATGTTAGTAAACGAGACAAGATTGGTCTTCATGATTGTGTTGAAACAACCGACAGGACGATTTATGAGCTTGGCAAAGCTATAGAGGTCTTTCGTGAGTATCCGAACAAGGGATCTCTTACTTCGTACGCCAATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGTTTGCAAATTCATCTACCATCTTGATTATCTTGCTCATTTTGAAGTTAATAATATATATTGTGTACCTTTTTATTTTTGGTTCAGAGAAAGAGTTTTGAGACTTATTGAGAACGCACATATTCATGTGACAAATTTGTGTAGTAATGCATTGGCTTTGGTTAAAAAATTGACAGAACAAGACGAGAAAAGCTTGGTGGTCCATGATTTCCCTTATAAGATAGCATCCGTACCCTCCATAGATGACCCCAAAATTATACTCATTTCCAACCAGGTATAA

Protein sequence

MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQDEKSLVVHDFPYKIASVPSIDDPKIILISNQV

Homology

[Close]

BLAST of IVF0018705 vs. ExPASy Swiss-Prot
Match: O04886 (Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 6   DVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-V 65
           +++KR+K+ LHDC+ET D T+ EL KA+E   EYPNK SL+ +A+DLKT +S+A+TNQ  
Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGT 188

Query: 66  CKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQD 125
           C     LD  +H + N            + V   + +  +HV  +CSNALA++K +T+ D
Sbjct: 189 C-----LDGFSHDDAN------------KHVRDALSDGQVHVEKMCSNALAMIKNMTDTD 231

[Close]

BLAST of IVF0018705 vs. ExPASy Swiss-Prot
Match: P83948 (Pectinesterase 3 OS=Citrus sinensis OX=2711 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 6   DVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-V 65
           +++KR+K+ LHDC+ET D T+ EL KA+E   EYPNK SL+ +A+DLKT +S+A+TNQ  
Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGT 188

Query: 66  CKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQD 125
           C     LD  +H + N            + V   + +  +HV  +CSNALA++K +T+ D
Sbjct: 189 C-----LDGFSHDDAN------------KHVRDALSDGQVHVEKMCSNALAMIKNMTDTD 231

[Close]

BLAST of IVF0018705 vs. ExPASy Swiss-Prot
Match: Q43143 (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum OX=4081 GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-15
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-VC 66
           ++ R+K+ LHDC+ET D T+ EL  A+E    YPNK SL  +  DLKT +SSAITNQ  C
Sbjct: 128 LTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETC 187

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQD 125
                LD  +H E +            ++V +++     HV  +CSNALA++  +T+ D
Sbjct: 188 -----LDGFSHDEAD------------KKVRKVLLKGQKHVEKMCSNALAMICNMTDTD 229

[Close]

BLAST of IVF0018705 vs. ExPASy Swiss-Prot
Match: O49006 (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME3 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-VC 66
           ++ R+K  LHDC+ET D T+ EL + +E    YP K +L  +A DLKT +SSAITNQ  C
Sbjct: 119 LTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETC 178

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQD 125
                LD  +H + +            ++V + +    IHV ++CSNALA++K +T+ D
Sbjct: 179 -----LDGFSHDDAD------------KQVRKALLKGQIHVEHMCSNALAMIKNMTDTD 220

[Close]

BLAST of IVF0018705 vs. ExPASy Swiss-Prot
Match: Q42534 (Pectinesterase 2 OS=Arabidopsis thaliana OX=3702 GN=PME2 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-15
Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-VC 66
           ++ R+   LHDC+ET D T+ EL  A+E   +YP + SL  +A+DLKT +SSAITNQ  C
Sbjct: 122 LTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTC 181

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQDE 126
                LD  ++ + +             +V + +    +HV ++CSNALA++K +TE D 
Sbjct: 182 -----LDGFSYDDAD------------RKVRKALLKGQVHVEHMCSNALAMIKNMTETDI 231

Query: 127 KSLVVHD 133
            +  + D
Sbjct: 242 ANFELRD 231

[Close]

BLAST of IVF0018705 vs. ExPASy TrEMBL
Match: A0A5A7SM02 (Pectinesterase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00800 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.7e-53
Identity = 117/142 (82.39%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI
Sbjct: 87  MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 146

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV      LD L+H +              +RVLRLIENAHIHVTNLCSNALALVKKL
Sbjct: 147 TNQVT----CLDGLSHDKT------------EKRVLRLIENAHIHVTNLCSNALALVKKL 206

Query: 121 TEQDEKSLVVHDFPYKIASVPS 143
           TEQDEKSLVVHDFPYKIASVPS
Sbjct: 207 TEQDEKSLVVHDFPYKIASVPS 212

[Close]

BLAST of IVF0018705 vs. ExPASy TrEMBL
Match: A0A0A0K9Y3 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343870 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 112/159 (70.44%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           M   ++VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNK SLT YA+DLKTFLSSAI
Sbjct: 87  MVSTNNVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKRSLTLYADDLKTFLSSAI 146

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV      LD L+H +              +RVLRLIENAHIHVT LCSNALALV+KL
Sbjct: 147 TNQVT----CLDGLSHDKT------------EKRVLRLIENAHIHVTKLCSNALALVQKL 206

Query: 121 TEQ----DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 155
           T      DEKSLVVHDFPYKI S+PS +DDPKI+L SNQ
Sbjct: 207 TTDIAITDEKSLVVHDFPYKITSIPSQMDDPKIVLFSNQ 229

[Close]

BLAST of IVF0018705 vs. ExPASy TrEMBL
Match: A0A0A0K6S6 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343850 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40
Identity = 101/153 (66.01%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQVCK 66
           V KRD+I LHDCV+TTDRTIYEL KAI+ F EYPNK SL SYA+DLKTFLSSAITNQV  
Sbjct: 100 VGKRDRIALHDCVKTTDRTIYELDKAIQDFSEYPNKKSLASYADDLKTFLSSAITNQVT- 159

Query: 67  FIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQ--- 126
               LD L+H +              +RVLRLIEN H  VT LCSNALALVKKLT     
Sbjct: 160 ---CLDGLSHDKT------------EKRVLRLIENTHNQVTKLCSNALALVKKLTTDVAL 219

Query: 127 -DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 155
            DEKSLVVHDFPYKI S+ S IDDPKI+L SNQ
Sbjct: 220 TDEKSLVVHDFPYKITSISSQIDDPKIVLFSNQ 236

[Close]

BLAST of IVF0018705 vs. ExPASy TrEMBL
Match: A0A1S3C861 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103497582 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.9e-39
Identity = 101/159 (63.52%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MS N +VSKRD+I LHDCV++TDRTIYEL KAIE FREYPNK SLTSYA+DLKTFLSSAI
Sbjct: 94  MSFN-NVSKRDRIPLHDCVKSTDRTIYELDKAIEDFREYPNKKSLTSYADDLKTFLSSAI 153

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV         L  F+ +            + VLR+IEN HIH T LCSNALALVKKL
Sbjct: 154 TNQV-------TCLDGFQDDKT---------EKGVLRVIENTHIHATKLCSNALALVKKL 213

Query: 121 TEQ----DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 155
           T +    DEK+LVVHDFPYKI S+ S I+D KI+L SNQ
Sbjct: 214 TTEIALIDEKNLVVHDFPYKITSISSQINDLKIVLFSNQ 235

[Close]

BLAST of IVF0018705 vs. ExPASy TrEMBL
Match: A0A5D3E4E8 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001330 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.3e-30
Identity = 83/132 (62.88%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MS+N +VSKRD+I LHDCV++TDRTIYEL KAIE FREYPNK SLTSYA+DLKTFLSSAI
Sbjct: 95  MSVN-NVSKRDRIPLHDCVKSTDRTIYELDKAIEDFREYPNKKSLTSYADDLKTFLSSAI 154

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV         L  F+ +            +RVLR+IEN HIH T LCSNALALVKKL
Sbjct: 155 TNQV-------TCLDGFQDDKT---------EKRVLRVIENTHIHATKLCSNALALVKKL 209

Query: 121 TEQ----DEKSL 129
           T +    DEK+L
Sbjct: 215 TTEIALIDEKNL 209

[Close]

BLAST of IVF0018705 vs. NCBI nr
Match: KAA0026172.1 (pectinesterase-like [Cucumis melo var. makuwa] >TYK11629.1 pectinesterase-like [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 2.17e-68
Identity = 117/142 (82.39%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI
Sbjct: 87  MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 146

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV      LD L+H +              +RVLRLIENAHIHVTNLCSNALALVKKL
Sbjct: 147 TNQVTC----LDGLSHDKTE------------KRVLRLIENAHIHVTNLCSNALALVKKL 206

Query: 121 TEQDEKSLVVHDFPYKIASVPS 142
           TEQDEKSLVVHDFPYKIASVPS
Sbjct: 207 TEQDEKSLVVHDFPYKIASVPS 212

[Close]

BLAST of IVF0018705 vs. NCBI nr
Match: XP_004139620.2 (pectinesterase [Cucumis sativus] >KGN44621.1 hypothetical protein Csa_015743 [Cucumis sativus])

HSP 1 Score: 197 bits (502), Expect = 3.58e-57
Identity = 112/159 (70.44%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           M   ++VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNK SLT YA+DLKTFLSSAI
Sbjct: 87  MVSTNNVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKRSLTLYADDLKTFLSSAI 146

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV      LD L+H +              +RVLRLIENAHIHVT LCSNALALV+KL
Sbjct: 147 TNQVTC----LDGLSHDKTE------------KRVLRLIENAHIHVTKLCSNALALVQKL 206

Query: 121 TEQ----DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 154
           T      DEKSLVVHDFPYKI S+PS +DDPKI+L SNQ
Sbjct: 207 TTDIAITDEKSLVVHDFPYKITSIPSQMDDPKIVLFSNQ 229

[Close]

BLAST of IVF0018705 vs. NCBI nr
Match: XP_011659194.1 (pectinesterase [Cucumis sativus] >KGN44619.1 hypothetical protein Csa_015815 [Cucumis sativus])

HSP 1 Score: 174 bits (442), Expect = 2.22e-48
Identity = 101/153 (66.01%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQVCK 66
           V KRD+I LHDCV+TTDRTIYEL KAI+ F EYPNK SL SYA+DLKTFLSSAITNQV  
Sbjct: 100 VGKRDRIALHDCVKTTDRTIYELDKAIQDFSEYPNKKSLASYADDLKTFLSSAITNQVTC 159

Query: 67  FIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQ--- 126
               LD L+H +              +RVLRLIEN H  VT LCSNALALVKKLT     
Sbjct: 160 ----LDGLSHDKTE------------KRVLRLIENTHNQVTKLCSNALALVKKLTTDVAL 219

Query: 127 -DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 154
            DEKSLVVHDFPYKI S+ S IDDPKI+L SNQ
Sbjct: 220 TDEKSLVVHDFPYKITSISSQIDDPKIVLFSNQ 236

[Close]

BLAST of IVF0018705 vs. NCBI nr
Match: XP_008458040.2 (PREDICTED: LOW QUALITY PROTEIN: pectinesterase-like [Cucumis melo])

HSP 1 Score: 169 bits (429), Expect = 1.71e-46
Identity = 101/159 (63.52%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MS N+ VSKRD+I LHDCV++TDRTIYEL KAIE FREYPNK SLTSYA+DLKTFLSSAI
Sbjct: 94  MSFNN-VSKRDRIPLHDCVKSTDRTIYELDKAIEDFREYPNKKSLTSYADDLKTFLSSAI 153

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV         L  F+ +            + VLR+IEN HIH T LCSNALALVKKL
Sbjct: 154 TNQVTC-------LDGFQDDKT---------EKGVLRVIENTHIHATKLCSNALALVKKL 213

Query: 121 TEQ----DEKSLVVHDFPYKIASVPS-IDDPKIILISNQ 154
           T +    DEK+LVVHDFPYKI S+ S I+D KI+L SNQ
Sbjct: 214 TTEIALIDEKNLVVHDFPYKITSISSQINDLKIVLFSNQ 235

[Close]

BLAST of IVF0018705 vs. NCBI nr
Match: KAA0026177.1 (pectinesterase-like [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (350), Expect = 2.82e-35
Identity = 83/132 (62.88%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MSINDDVSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAI 60
           MS+N+ VSKRD+I LHDCV++TDRTIYEL KAIE FREYPNK SLTSYA+DLKTFLSSAI
Sbjct: 95  MSVNN-VSKRDRIPLHDCVKSTDRTIYELDKAIEDFREYPNKKSLTSYADDLKTFLSSAI 154

Query: 61  TNQVCKFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 120
           TNQV         L  F+ +            +RVLR+IEN HIH T LCSNALALVKKL
Sbjct: 155 TNQVTC-------LDGFQDDKT---------EKRVLRVIENTHIHATKLCSNALALVKKL 209

Query: 121 TEQ----DEKSL 128
           T +    DEK+L
Sbjct: 215 TTEIALIDEKNL 209

[Close]

BLAST of IVF0018705 vs. TAIR 10
Match: AT3G14310.1 (pectin methylesterase 3 )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-VC 66
           ++ R+K  LHDC+ET D T+ EL + +E    YP K +L  +A DLKT +SSAITNQ  C
Sbjct: 119 LTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETC 178

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQD 125
                LD  +H + +            ++V + +    IHV ++CSNALA++K +T+ D
Sbjct: 179 -----LDGFSHDDAD------------KQVRKALLKGQIHVEHMCSNALAMIKNMTDTD 220

[Close]

BLAST of IVF0018705 vs. TAIR 10
Match: AT1G53830.1 (pectin methylesterase 2 )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAITNQ-VC 66
           ++ R+   LHDC+ET D T+ EL  A+E   +YP + SL  +A+DLKT +SSAITNQ  C
Sbjct: 122 LTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTC 181

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKLTEQDE 126
                LD  ++ + +             +V + +    +HV ++CSNALA++K +TE D 
Sbjct: 182 -----LDGFSYDDAD------------RKVRKALLKGQVHVEHMCSNALAMIKNMTETDI 231

Query: 127 KSLVVHD 133
            +  + D
Sbjct: 242 ANFELRD 231

[Close]

BLAST of IVF0018705 vs. TAIR 10
Match: AT2G47670.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 36/115 (31.30%), Postives = 53/115 (46.09%), Query Frame = 0


Query: 7   VSKRDKIGLHDCVETTDRTIYELGKAIEVFREYPNKGSLTSYANDLKTFLSSAIT-NQVC 66
           V + ++I L DC E    ++  L K++ V R   N        +DL T+LS+A+T +  C
Sbjct: 107 VGESERIALSDCRELFVDSLDNLYKSLAVLRTL-NADEFQRQISDLATWLSAALTDDDTC 166

Query: 67  KFIYHLDYLAHFEVNNIYCVPFYFWFRERVLRLIENAHIHVTNLCSNALALVKKL 121
                   L  FE  +          R R +R++         LCSNALAL+KKL
Sbjct: 167 --------LDGFEETS---------SRTRTVRMVRRKATKCMRLCSNALALLKKL 203

The following BLAST results are available for this feature:

BLAST of IVF0018705 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04886	2.5e-19	41.67	Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1	[more]
P83948	2.5e-19	41.67	Pectinesterase 3 OS=Citrus sinensis OX=2711 PE=1 SV=1	[more]
Q43143	1.7e-15	39.50	Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum OX=4081 GN=PM...	[more]
O49006	2.2e-15	38.66	Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME...	[more]
Q42534	4.9e-15	36.22	Pectinesterase 2 OS=Arabidopsis thaliana OX=3702 GN=PME2 PE=2 SV=2	[more]

BLAST of IVF0018705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SM02	4.7e-53	82.39	Pectinesterase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G...	[more]
A0A0A0K9Y3	2.9e-47	70.44	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343870 PE=3 SV=1	[more]
A0A0A0K6S6	2.7e-40	66.01	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343850 PE=3 SV=1	[more]
A0A1S3C861	3.9e-39	63.52	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103497582 PE=3 SV=1	[more]
A0A5D3E4E8	3.3e-30	62.88	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00133...	[more]

BLAST of IVF0018705 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026172.1	2.17e-68	82.39	pectinesterase-like [Cucumis melo var. makuwa] >TYK11629.1 pectinesterase-like [...	[more]
XP_004139620.2	3.58e-57	70.44	pectinesterase [Cucumis sativus] >KGN44621.1 hypothetical protein Csa_015743 [Cu...	[more]
XP_011659194.1	2.22e-48	66.01	pectinesterase [Cucumis sativus] >KGN44619.1 hypothetical protein Csa_015815 [Cu...	[more]
XP_008458040.2	1.71e-46	63.52	PREDICTED: LOW QUALITY PROTEIN: pectinesterase-like [Cucumis melo]	[more]
KAA0026177.1	2.82e-35	62.88	pectinesterase-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0018705 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14310.1	1.6e-16	38.66	pectin methylesterase 3	[more]
AT1G53830.1	3.5e-16	36.22	pectin methylesterase 2	[more]
AT2G47670.1	2.3e-04	31.30	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	1.20.140.40	Invertase/pectin methylesterase inhibitor family protein	coord: 2..122 e-value: 1.7E-7 score: 33.3
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 6..64
None	No IPR available	PANTHER	PTHR31707:SF312	PECTINESTERASE	coord: 8..139
None	No IPR available	PANTHER	PTHR31707	PECTINESTERASE	coord: 8..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018705.1	IVF0018705.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0043086	negative regulation of catalytic activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity