IVF0018664 (gene) Melon (IVF77) v1

Overview


Name	IVF0018664
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein FAM33A
Location	chr07: 909185 .. 913548 (-)
RNA-Seq Expression	IVF0018664
Synteny	IVF0018664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGCGCGAAAACCCTAGCGGAGAGAGAGTATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGTAAGAGCAACACAATCATTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCTTCTTCTTCATGTTATTCTTCTCGTTGATTGAATGAAGTAGGCACTGATTAGTTTAATGAGGAAGTTCTAGTGCTTGAAATGAGTATTGAACTTTTTACGTCTCTCTAAGGTGTGAGTGTTTCACAGTGCTAGTACCAAATCCTCGACCTTAATGTAGAATGGAACGACTTCATTCTACAGCGCAAGAGCATTATAGGCTTTCTTATGATTTTAATCGGGCAATATTTGGCTTGAGGTTGGAGTTCAAGATCTGGATCTCAATTTTCAACTATTTTGTTATCTATTTGCTGTTGTTTCATTGTCCTAACACAAGATCACGAGCTTAATGTAGAATTATTCAATTTGATAGCGTAGAAGGAAGTATCTATCCTGTCAGTTAGAGCTTCATACGTTTATCTTATTTTTCTTCTAATTCTTCTTCTTCTGAGCTGAATCAAGATATATTTCATTACCTTTTGGTTATTGACATTTCACAACAGTATCACAAGATCTTGACCTGCTTATGAGCTAGAGTCGAATTATTTCGGTTTACAGTGTAAGAGCAAGTAATCTATACTGCTGTTCTATATGATTTGAGGAGGAAGTAGTAGCTAGATCTCGAGCTTAATGAAGAGTTATTTCATTTTTCAATTAGGATGCCGTTACTATTGTGTGATTTTATGCTTAATGTAGAATTGCTTCTTTTTCTCTTGCCATTTAGTTTATTTCATACCGCTAACCAGTAATCTGTTGTGGTTCTTGATTTTAAAAGGTTTGTTTCGCTCCATAAATTTGTTGTTCTGAGAATGGATCCTGTAATTTTCAGGTTGAACTTCTTGTTCACCCATAGTTCCTCTTCATTTTTGAAATTCTGATTCTAGTCAGCTCTTTGATGCTTAACGTCTGATTATTGCCGTTTGTTTCTCAATAATCTTTTGTGGCGGTTAAAATGGATTCAAACACAATAGTGACAGATTATTCAGTCTTTGTTTGACGGTTGAGATTTGAAAATTCTCTTAGAATATGTAACGGTGACGGGGATGAAATATCTCGATGTACAAAGTATATCTCCTTGCAGCATAAAGATAACCAAAGAATAAAGTGGAATTCGATCTCCTATTTTCTTCGATATTCTTTCTGGAAAATAGGAGTACTAATTTGTTATTGGTCGAGTGGTGATTTTCATCCAAGATTTTGTGAATTTTCTGCAGGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTTTGACAGCTAAACAGGTACTTTCTCCATTTATTATCTCAAGAAAAGTATTGGCTAGAGGAAACACACACGTGCTAGATCATGCTCTATGTATACGAACCTTTTTTTTTTTTTTCTTTCAAGAATTAGGTCTGCAACTCCATTTCACTTCGATTTCGTGTGATGAAATGTTGATATAATGTATATTATATCTAAATAAATGAAATTTGATGTTTGGTAATGTGATGTCTGATGATAATAGGATGAATGTATTTGGTTGGTGAAATGTGATCTGTATTTCTGTTATATATAATTCAAAGTCTAATTTTATGTTTCATAATATTTATTTCGGAAATAATTTGTTTAATGTATTACAAACATTGAACTTAGAAATTATTTATTGTAAATAAATTTGCATTGAAACTCACTTTTCTTTTCCTGGCGATTTTGTTTTTAGTTTTGTGGTTTTAAAATTTATGTGTTATTTTCCAATTTTCTTTCGCCCTTCTCACCTTTCTTAAACAAAAATTTGAATTTGTTCTAAAAATAAAAACTATTCTTTTTTAGTATCCGTTTTGTATTTTAAAAACATGACTAGAACATAGATAACAAAACAAAAAAACTTGGAGTGGTAGTGTTTATAAGTTTAATCTTTAAAAATAACATTATAATGCTTTATTTAATGAACATTTAACTTTTATTTAAATTAAAGCCAAACCATGTTTTGAAAACTTGGCAAGCAAAAAATTCTAAATGTCTTGGTAGTTGGTGCCTGATCTTCTGCTCTTTATCGTAGGATAAGGATTAGAAAAGACATCAGTACTTGATGGAACGGCTTTGACATGTACACTGCTTTTGCTTGTTTTAGAACTGAACACGCTGTTTGATACCTATTACTAATTTTTTTAGGAGGCATGACACTCTGACGTGTACGGTATTTATTCTTGTTCTGGAACTGAAACTGAGTGATTTCAATACATACTGCTAATTTCGGCGACGATGATGTGCTGTTCAAATGCAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTCGATGATCCTGCATTGGCGGAATTCAAGCAGGTATTCATCGTCAATGACCCTTGGTTTGCATTTTGTTGTGGTCAGTACGACGCATTGATTATTTCTCAGTCTTGACCCTGAATTGCATTTTGTGGTTAATATGCTTAGGCAAGTGATTGCAGCTTTTAGTTTTGATGTCACAATTTACTCTTGGTCTTATCTTTATGCATGTTTTGGATTGATTTTGAAATGGTTAAAATCATTATTGTCATATGTTTAAAACCACTCTAAAATATGTTTTTAATGACTCAAAGTTAGTTTAATATTTAACTTTACTCTCTCAAATGATTTTTTTTTTTATCAAAGTTGGTTTTGAATCCTGAATAACATCTTTTACGGTGATTTTTAACTATTTTAGTATTATTTTCAACTACGCTTTTTTATTTTTCATTGTGCCTTTTCTTTTGGGTCATTTAAGTTTCCACTTAACATCTGTGTATTAAACTAATACAAGCCTTTTATTTATTTAAAATATCGTTCTTCTTTGGCTATTAGAGAGGGTAACACAGTGAAAGGGACATTTTAGCAAAATTGTCTCAAGTGCTCCATCGTCTGCTTTATTTTGATTTAAAAGGGTTGCAATTTCCAAGTGGTGCTTTTAGTGTTTGTACCATTTGCCAGCAAGTAACCAATATTAAATATACCAAAGGCTTTTCTTTGGATTGGACATCCACATTAGTTTGTATGTGGTATTTCCATCTTTTGGATAAAGCTTACATAACCAAATGTCTCACCCTCTCCATGTAGGAGCGTCGTTCTTTTTAAAGTACTTAATGAGGATGGAGATTGAACCTCTAACCTCTAAAGAGGGAGATAATGCCAATTACTGATAAGTTAACCTCATTTTAGCTTTCAGAGTCATTAATTAATGCTAAACCATTTCCTGTATTTGTCTCATGTAGATTACTGAGGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGGTTCTTTTCAAGCTTTCTACAGAATTCTTAATTCAAATTTCACTCATCCTAGTAAAAACTCAAGGCACAACCATTGAACCGTTGATTTTTCTTTTTTTTTTTTATTTATGTTCTTTGTAACAATACGTGG

mRNA sequence

GAGAGCGCGAAAACCCTAGCGGAGAGAGAGTATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTTTGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTCGATGATCCTGCATTGGCGGAATTCAAGCAGATTACTGAGGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGGTTCTTTTCAAGCTTTCTACAGAATTCTTAATTCAAATTTCACTCATCCTAGTAAAAACTCAAGGCACAACCATTGAACCGTTGATTTTTCTTTTTTTTTTTTATTTATGTTCTTTGTAACAATACGTGG

Coding sequence (CDS)

ATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTTTGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTCGATGATCCTGCATTGGCGGAATTCAAGCAGATTACTGAGGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGGTTCTTTTCAAGCTTTCTACAGAATTCTTAATTCAAATTTCACTCATCCTAGTAAAAACTCAAGGCACAACCATTGA

Protein sequence

MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGKGSFQAFYRILNSNFTHPSKNSRHNH

Homology

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BLAST of IVF0018664 vs. ExPASy Swiss-Prot
Match: Q8WVK7 (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04
Identity = 37/122 (30.33%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 15  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCR 74
           D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + +
Sbjct: 6   DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFK 65

Query: 75  EVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQITEEWTTQVQS 134
            V   +++   +    +    NM+QK+Q        +DL+   L +     EE T   Q 
Sbjct: 66  PVAVEQKESKSRICATVKKTMNMIQKLQKQ------TDLELSPLTK-----EEKTAAEQF 116

[Close]

BLAST of IVF0018664 vs. ExPASy Swiss-Prot
Match: Q4R8E8 (Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.8e-04
Identity = 32/119 (26.89%), Postives = 58/119 (48.74%), Query Frame = 0


Query: 15  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCR 74
           D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + +
Sbjct: 6   DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSALKSRYQTLYARFK 65

Query: 75  EVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD-DPALAEFKQITEEWTTQV 130
            V   +++   +    +    N++QK+Q        +DL+  P   E K   E++ + +
Sbjct: 66  PVAVEQKETKSRICATVNKTMNVIQKLQKQ------TDLELSPLTKEEKTAAEQFKSHM 118

[Close]

BLAST of IVF0018664 vs. ExPASy TrEMBL
Match: A0A5A7VFB8 (Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001430 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGK 136
           ITEEWTTQVQSKFG+
Sbjct: 121 ITEEWTTQVQSKFGE 135

[Close]

BLAST of IVF0018664 vs. ExPASy TrEMBL
Match: A0A1S3BUQ8 (Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGK 136
           ITEEWTTQVQSKFG+
Sbjct: 121 ITEEWTTQVQSKFGE 135

[Close]

BLAST of IVF0018664 vs. ExPASy TrEMBL
Match: A0A0A0L5I9 (Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQASMGIPFVSDLDDPA +EFKQ
Sbjct: 61  DDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLDDPAFSEFKQ 120

Query: 121 ITEEWTTQVQSKF 134
           ITEEWTTQVQSKF
Sbjct: 121 ITEEWTTQVQSKF 133

[Close]

BLAST of IVF0018664 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.0e-58
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGL-HHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQASMGIP VSDLDD A A+FK+
Sbjct: 61  DDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKK 120

Query: 121 ITEEWTTQVQSKFG 135
           ITEEWTTQVQSK G
Sbjct: 121 ITEEWTTQVQSKIG 133

[Close]

BLAST of IVF0018664 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+
Sbjct: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIR 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQASMG PFVSD DDPA  +FKQ
Sbjct: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQ 120

Query: 121 ITEEWTTQVQSKFGK 136
           ITEEWTTQVQSK G+
Sbjct: 121 ITEEWTTQVQSKIGE 134

[Close]

BLAST of IVF0018664 vs. NCBI nr
Match: XP_008452819.1 (PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo] >KAA0064565.1 spindle and kinetochore-associated protein 2 [Cucumis melo var. makuwa] >TYK20025.1 spindle and kinetochore-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 1.30e-88
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFGK 135
           ITEEWTTQVQSKFG+
Sbjct: 121 ITEEWTTQVQSKFGE 135

[Close]

BLAST of IVF0018664 vs. NCBI nr
Match: XP_004145489.1 (spindle and kinetochore-associated protein 2 [Cucumis sativus] >KGN55411.1 hypothetical protein Csa_012758 [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 1.44e-83
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQASMGIPFVSDLDDPA +EFKQ
Sbjct: 61  DDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLDDPAFSEFKQ 120

Query: 121 ITEEWTTQVQSKF 133
           ITEEWTTQVQSKF
Sbjct: 121 ITEEWTTQVQSKF 133

[Close]

BLAST of IVF0018664 vs. NCBI nr
Match: XP_038898183.1 (spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1 spindle and kinetochore-associated protein 2 [Benincasa hispida])

HSP 1 Score: 241 bits (614), Expect = 7.11e-79
Identity = 124/142 (87.32%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 6   HLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDIST 65
           HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+DDIST
Sbjct: 5   HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRDDIST 64

Query: 66  LKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQITEEW 125
           LKEQCREVL AKQDVIDKARTVL+GNRNMLQK+QASMG+PFVSDLDDPA AEFKQITEEW
Sbjct: 65  LKEQCREVLMAKQDVIDKARTVLVGNRNMLQKLQASMGVPFVSDLDDPAFAEFKQITEEW 124

Query: 126 TTQVQSKFGK-GSFQAFYRILN 146
           T QVQSKFG+ G   A Y  +N
Sbjct: 125 TRQVQSKFGEDGQEDADYNDVN 146

[Close]

BLAST of IVF0018664 vs. NCBI nr
Match: XP_022141272.1 (spindle and kinetochore-associated protein 2 [Momordica charantia])

HSP 1 Score: 232 bits (591), Expect = 2.42e-75
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGL-HHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQASMGIP VSDLDD A A+FK+
Sbjct: 61  DDISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKK 120

Query: 121 ITEEWTTQVQSKFG 134
           ITEEWTTQVQSK G
Sbjct: 121 ITEEWTTQVQSKIG 133

[Close]

BLAST of IVF0018664 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227 bits (578), Expect = 2.17e-73
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60
           MG+DH LHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+
Sbjct: 1   MGLDH-LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIR 60

Query: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQASMG PFVSD DDPA  +FKQ
Sbjct: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQ 120

Query: 121 ITEEWTTQVQSKFGK 135
           ITEEWTTQVQSK G+
Sbjct: 121 ITEEWTTQVQSKIGE 134

[Close]

BLAST of IVF0018664 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 4.8e-37
Identity = 72/125 (57.60%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 8   HQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLK 67
           + HHQA D L+N+F++A+ DL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+Q+D++ LK
Sbjct: 4   NHHHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDVTLLK 63

Query: 68  EQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQITEEWTT 127
            QC ++L+AKQD+IDKA+T L+GN N++QKM AS+G     D DD ALA+F QI +EWT 
Sbjct: 64  HQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIIDEWTM 123

Query: 128 QVQSK 133
           QV+S+
Sbjct: 124 QVRSR 127

The following BLAST results are available for this feature:

BLAST of IVF0018664 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVK7	2.3e-04	30.33	Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=...	[more]
Q4R8E8	6.8e-04	26.89	Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=S...	[more]

BLAST of IVF0018664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFB8	4.1e-68	99.26	Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00143...	[more]
A0A1S3BUQ8	4.1e-68	99.26	Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1	[more]
A0A0A0L5I9	2.7e-64	96.24	Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1	[more]
A0A6J1CJF1	5.0e-58	88.06	Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1	[more]
A0A6J1F6V9	1.2e-56	85.93	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]

BLAST of IVF0018664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452819.1	1.30e-88	99.26	PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo] >KAA00645...	[more]
XP_004145489.1	1.44e-83	96.24	spindle and kinetochore-associated protein 2 [Cucumis sativus] >KGN55411.1 hypot...	[more]
XP_038898183.1	7.11e-79	87.32	spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1...	[more]
XP_022141272.1	2.42e-75	88.06	spindle and kinetochore-associated protein 2 [Momordica charantia]	[more]
KAG6591515.1	2.17e-73	85.93	hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0018664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24970.1	4.8e-37	57.60	unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	GENE3D	6.10.250.1380		coord: 11..128 e-value: 4.6E-26 score: 93.0
IPR042091	Ska2, N-terminal	PFAM	PF16740	SKA2	coord: 11..119 e-value: 8.0E-41 score: 138.3
IPR026762	Spindle and kinetochore-associated protein 2	PANTHER	PTHR32017	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	coord: 13..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018664.3	IVF0018664.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000940	outer kinetochore
cellular_component	GO:0005876	spindle microtubule
molecular_function	GO:0008017	microtubule binding