IVF0018436 (gene) Melon (IVF77) v1

Overview


Name	IVF0018436
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	chr04: 29437975 .. 29438608 (+)
RNA-Seq Expression	IVF0018436
Synteny	IVF0018436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTACGACTGCGAGAAGCACTGCAAGAAGAAACGCAAGAAGCTCATCAAACTAATCGGCGCAATCATCGGCGTCTTCATCTTCCTCGTCCTCCTCACCATCCTCATCGTCTGGGCAGTCCTCCGTCCCACCAAACCCACTTTCTTCCTTCAAGACGTCACCGTCTACGCCTTCAACGCCACCGTCCCCAGTTTCCTCACCTCCATTTCCTCCTCACTATCTCCTCTCGCAACCCAAACCGCCGAATCGGAATCTACTACGACGAACTCCACGTCTATGCCATCTACCGAAACCAACAGATCACTCTCCGGACCATCATCCCTCGCTTCTACCAAGGCCATAAGGACGTCAACGTATGGTCCCTTTCGTCTCCGGCACCTCCGTGCCGGTCGCGCCCTTCATCAGTTCGGCGCTGAATCAGGACAGGAACGCCGGAGCACTGATGATCCTGGTCAAAATTGACGGCAAGGTTCGATGGAAGGTCGGAAGCTTCATAACTGGGCGGTACCAATTCCACGCGAACTGCCCGGTGGTGATAAACTTCGGTGCGTATCCGGCGAACGGAGACGGGTCGATGGTTCAGTATAACGTGAAGTACCAAGTGGTTCAGAGATGCGACGTTAGCGTTTGA

mRNA sequence

ATGGCCTACGACTGCGAGAAGCACTGCAAGAAGAAACGCAAGAAGCTCATCAAACTAATCGGCGCAATCATCGGCGTCTTCATCTTCCTCGTCCTCCTCACCATCCTCATCGTCTGGGCAGTCCTCCGTCCCACCAAACCCACTTTCTTCCTTCAAGACGTCACCTTTCCTCACCTCCATTTCCTCCTCACTATCTCCTCTCGCAACCCAAACCGCCGAATCGGAATCTACTACGACGAACTCCACGTCTATGCCATCTACCGAAACCAACAGATCACTCTCCGGACCATCATCCCTCGCTTCTACCAAGGCCATAAGGACGTCAACGTATGGTCCCTTTCTTCGGCGCTGAATCAGGACAGGAACGCCGGAGCACTGATGATCCTGGTCAAAATTGACGGCAAGGTTCGATGGAAGGTCGGAAGCTTCATAACTGGGCGGTACCAATTCCACGCGAACTGCCCGGTGGTGATAAACTTCGGTGCGTATCCGGCGAACGGAGACGGGTCGATGGTTCAGTATAACGTGAAGTACCAAGTGGTTCAGAGATGCGACGTTAGCGTTTGA

Coding sequence (CDS)

ATGGCCTACGACTGCGAGAAGCACTGCAAGAAGAAACGCAAGAAGCTCATCAAACTAATCGGCGCAATCATCGGCGTCTTCATCTTCCTCGTCCTCCTCACCATCCTCATCGTCTGGGCAGTCCTCCGTCCCACCAAACCCACTTTCTTCCTTCAAGACGTCACCTTTCCTCACCTCCATTTCCTCCTCACTATCTCCTCTCGCAACCCAAACCGCCGAATCGGAATCTACTACGACGAACTCCACGTCTATGCCATCTACCGAAACCAACAGATCACTCTCCGGACCATCATCCCTCGCTTCTACCAAGGCCATAAGGACGTCAACGTATGGTCCCTTTCTTCGGCGCTGAATCAGGACAGGAACGCCGGAGCACTGATGATCCTGGTCAAAATTGACGGCAAGGTTCGATGGAAGGTCGGAAGCTTCATAACTGGGCGGTACCAATTCCACGCGAACTGCCCGGTGGTGATAAACTTCGGTGCGTATCCGGCGAACGGAGACGGGTCGATGGTTCAGTATAACGTGAAGTACCAAGTGGTTCAGAGATGCGACGTTAGCGTTTGA

Protein sequence

MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTFPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWSLSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVINFGAYPANGDGSMVQYNVKYQVVQRCDVSV

Homology

[Close]

BLAST of IVF0018436 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43
Identity = 96/211 (45.50%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 4   DCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF------- 63
           DCE H   +RK + ++  +II V +F++ LTIL++WA+L+P+KP F LQD T        
Sbjct: 3   DCENHGHSRRKLIRRIFWSIIFV-LFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 62

Query: 64  --PHL---HFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVW 123
             P+L   +F +T+SSRNPN +IGIYYD L VYA YR+QQIT  T IP  YQGHKDV++W
Sbjct: 63  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 122

Query: 124 S-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVI 183
           S                +L+ D++ G ++++++ DG+VRWKVG+FITG+Y  H  CP  I
Sbjct: 123 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 182

Query: 184 NFGAYPANGDGSMVQYN-VKYQVVQRCDVSV 189
           NFG      +G +V  N VKY     C VSV
Sbjct: 183 NFG---NKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of IVF0018436 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-40
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 18  KLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF-------PHL---HFLLTISS 77
           ++ G IIG FI +VL+TI +VW +L+PTKP F LQD T        P+L   +F +TI+S
Sbjct: 20  RICGVIIG-FIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIAS 79

Query: 78  RNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWS-------------LS 137
           RN N RIGIYYD LHVYA YRNQQITLRT IP  YQGHK+ NVWS              +
Sbjct: 80  RNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNA 139

Query: 138 SALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVINFGAYPANGDGSMVQY 189
            AL  ++N G + ++++ DG+VRWKVG+ ITG+Y  H  C   IN     A   G  V  
Sbjct: 140 VALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAA---GVHVGE 199

[Close]

BLAST of IVF0018436 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-26
Identity = 67/184 (36.41%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 7   KHCKKKRKKLI----KLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQD-------VT 66
           KHC KK    I    K +      F   +LL I +VW +L P +P F L +       +T
Sbjct: 10  KHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLT 69

Query: 67  FPHLHFL-----LTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 126
               H L     LT+ S+NPN+++GIYYD+L VYA YR QQIT    +P FYQ H+++N+
Sbjct: 70  TSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINL 129

Query: 127 -------------WSLSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 162
                         S    ++++R+ G ++I +K+DGK+RWK+G++++G Y+F+ NC  +
Sbjct: 130 LTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAI 189

[Close]

BLAST of IVF0018436 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-11
Identity = 51/179 (28.49%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 21  GAIIGVFIFLVLLTI--------LIVWAVLRPTKPTFFLQDVTFPHL----------HFL 80
           G  I   IF +L+TI        LI+W + RP    F + D                +  
Sbjct: 41  GCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLD 100

Query: 81  LTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWSLS-------- 140
           L  + RNPNRRIG+YYDE+ V   Y +Q+  +   I +FYQGHK+  V            
Sbjct: 101 LNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVL 160

Query: 141 ------SALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVINFGAYPANG 168
                   LN+D N+    I  K+  K+R+K G   + R++    C + +   +   +G
Sbjct: 161 LDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 219

[Close]

BLAST of IVF0018436 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.8e-11
Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 0


Query: 16  LIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT---FPH--------LHFLLT 75
           L+ L   +I   I ++ +  LI W ++RP    F + D +   F H         +  LT
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 76  ISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWS------------ 135
           +  RNPN+RIG+YYD +  +A Y  ++ +  T+ P FYQGHK+  V +            
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFN 156

Query: 136 --LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANC 155
              S  LN +R +G   I +K   +VR+K+G     R +   +C
Sbjct: 157 AGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of IVF0018436 vs. ExPASy TrEMBL
Match: A0A5A7TRJ4 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001520 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 183/211 (86.73%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 69  MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 128

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 129 ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 188

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 189 WSPFVSGTSVPVAPFISSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 248

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           INFGAYPANGDGSMVQYNVKYQVVQRCDVSV
Sbjct: 249 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 279

[Close]

BLAST of IVF0018436 vs. ExPASy TrEMBL
Match: A0A5D3DNV1 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004510 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 183/211 (86.73%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTSVPVAPFISSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           INFGAYPANGDGSMVQYNVKYQVVQRCDVSV
Sbjct: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. ExPASy TrEMBL
Match: A0A1S3B6T7 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103486673 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 183/211 (86.73%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTSVPVAPFISSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           INFGAYPANGDGSMVQYNVKYQVVQRCDVSV
Sbjct: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. ExPASy TrEMBL
Match: A0A0A0LB20 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779770 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.6e-92
Identity = 177/211 (83.89%), Postives = 184/211 (87.20%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIG+FIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGIFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLT+SSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTVSSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SS LNQDRNAGALM+LVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTSVPVAPFISSELNQDRNAGALMLLVKIDGKVRWKVGSFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           INFGAYPANGDGS+VQYNVKYQVVQ+CDVSV
Sbjct: 181 INFGAYPANGDGSIVQYNVKYQVVQKCDVSV 211

[Close]

BLAST of IVF0018436 vs. ExPASy TrEMBL
Match: A0A6J1KW28 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111498712 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 154/211 (72.99%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCK KRKKL+KLIGAIIG+FI LVL TILI+WAVLRPTKPTF LQDVT     
Sbjct: 1   MAYDCEKHCKNKRKKLVKLIGAIIGIFIVLVLFTILIIWAVLRPTKPTFVLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLT++SRNPNRRIGIYYD+L VYA+YRNQQITLRTIIP FYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTVTSRNPNRRIGIYYDDLRVYAVYRNQQITLRTIIPGFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDR+AGAL++LVK++G+VRWKVG+FITGRY  HANCP  
Sbjct: 121 WSPFVSGTAVPVAPYISSALNQDRSAGALLLLVKLEGRVRWKVGNFITGRYHLHANCPAA 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           INFG YP+  DGS+VQYNVKYQVVQRCDVSV
Sbjct: 181 INFGGYPSPSDGSIVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. NCBI nr
Match: XP_008442910.2 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >TYK25313.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (905), Expect = 6.63e-122
Identity = 183/211 (86.73%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTSVPVAPFISSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 188
           INFGAYPANGDGSMVQYNVKYQVVQRCDVSV
Sbjct: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. NCBI nr
Match: KAA0043819.1 (NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (905), Expect = 7.18e-121
Identity = 183/211 (86.73%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 69  MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 128

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 129 ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 188

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 189 WSPFVSGTSVPVAPFISSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 248

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 188
           INFGAYPANGDGSMVQYNVKYQVVQRCDVSV
Sbjct: 249 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 279

[Close]

BLAST of IVF0018436 vs. NCBI nr
Match: XP_004136510.1 (NDR1/HIN1-like protein 1 [Cucumis sativus])

HSP 1 Score: 347 bits (889), Expect = 1.82e-119
Identity = 177/211 (83.89%), Postives = 184/211 (87.20%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIG+FIFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGIFIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLT+SSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTVSSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SS LNQDRNAGALM+LVKIDGKVRWKVGSFITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTSVPVAPFISSELNQDRNAGALMLLVKIDGKVRWKVGSFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 188
           INFGAYPANGDGS+VQYNVKYQVVQ+CDVSV
Sbjct: 181 INFGAYPANGDGSIVQYNVKYQVVQKCDVSV 211

[Close]

BLAST of IVF0018436 vs. NCBI nr
Match: XP_038906208.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 344 bits (882), Expect = 2.12e-118
Identity = 177/211 (83.89%), Postives = 183/211 (86.73%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCKKKRKKLIKLIGAIIG+ IFLVLLTILIVWAVLRPTKPTFFLQDVT     
Sbjct: 1   MAYDCEKHCKKKRKKLIKLIGAIIGIVIFLVLLTILIVWAVLRPTKPTFFLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDRNAGALM+LVKIDGKVRWKVG+FITGRYQFHANCPVV
Sbjct: 121 WSPFVSGTAVPVAPFISSALNQDRNAGALMLLVKIDGKVRWKVGNFITGRYQFHANCPVV 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 188
           INFGAYPA GDGS+VQYNVKYQVVQRCDVSV
Sbjct: 181 INFGAYPATGDGSIVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. NCBI nr
Match: XP_022946929.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023540735.1 NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308 bits (790), Expect = 2.21e-104
Identity = 154/211 (72.99%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT----- 60
           MAYDCEKHCK KRKKL+KLIGAIIG+FI LVL TILI+WAVLRPTKPTF LQDVT     
Sbjct: 1   MAYDCEKHCKNKRKKLVKLIGAIIGIFIVLVLFTILIIWAVLRPTKPTFVLQDVTVYAFN 60

Query: 61  -----FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
                F   +FLLT++SRNPNRRIGIYYD+L VYA+YRNQQITLRTIIP FYQGHKDVNV
Sbjct: 61  ATVPSFLTSNFLLTVTSRNPNRRIGIYYDDLRVYAVYRNQQITLRTIIPGFYQGHKDVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS             +SSALNQDR+AGAL++LVK++G+VRWKVG+FITGRY  HANCP  
Sbjct: 121 WSPFVSGTAVPVAPFISSALNQDRSAGALLLLVKLEGRVRWKVGNFITGRYHLHANCPAA 180

Query: 181 INFGAYPANGDGSMVQYNVKYQVVQRCDVSV 188
           INFG YP+  DGS+VQYNVKYQVVQRCDVSV
Sbjct: 181 INFGGYPSPSDGSIVQYNVKYQVVQRCDVSV 211

[Close]

BLAST of IVF0018436 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 176.4 bits (446), Expect = 2.1e-44
Identity = 96/211 (45.50%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 4   DCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF------- 63
           DCE H   +RK + ++  +II V +F++ LTIL++WA+L+P+KP F LQD T        
Sbjct: 3   DCENHGHSRRKLIRRIFWSIIFV-LFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 62

Query: 64  --PHL---HFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVW 123
             P+L   +F +T+SSRNPN +IGIYYD L VYA YR+QQIT  T IP  YQGHKDV++W
Sbjct: 63  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 122

Query: 124 S-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVI 183
           S                +L+ D++ G ++++++ DG+VRWKVG+FITG+Y  H  CP  I
Sbjct: 123 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 182

Query: 184 NFGAYPANGDGSMVQYN-VKYQVVQRCDVSV 189
           NFG      +G +V  N VKY     C VSV
Sbjct: 183 NFG---NKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of IVF0018436 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 171.8 bits (434), Expect = 5.3e-43
Identity = 101/212 (47.64%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 1   MAYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF---- 60
           M+ DC  H   K   + KL  AII  FI +VL+TI +VW +LRPTKP F LQD T     
Sbjct: 1   MSKDCGNHGGGKEVVVRKLCAAII-AFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFN 60

Query: 61  ---PHL---HFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNV 120
              P+L   +F +TI+SRNPN +IGIYYD LHVYA Y NQQITLRT IP  YQGHK+VNV
Sbjct: 61  LSQPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNV 120

Query: 121 WS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVV 180
           WS              S AL ++++ G + ++++ DG VRWKV + ITG+Y  H  C   
Sbjct: 121 WSPFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAF 180

Query: 181 INFGAYPANGDGSMVQYN-VKYQVVQRCDVSV 189
           IN G   A   G +V  N VKY +  +C V+V
Sbjct: 181 INLGNKAA---GVLVGDNAVKYTLANKCSVNV 208

[Close]

BLAST of IVF0018436 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 167.9 bits (424), Expect = 7.6e-42
Identity = 92/208 (44.23%), Postives = 126/208 (60.58%), Query Frame = 0


Query: 4   DCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVT-------- 63
           +CE H   + +K+ K IGA++  F+  VL  + +VWA+L P  P F LQD T        
Sbjct: 5   ECEHH-HDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQ 64

Query: 64  --FPHLHFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWS- 123
             +   +  +T+SSRNPN +IGI+YD L +YA YRNQQ+TL T++P  YQGH DV +WS 
Sbjct: 65  PNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSP 124

Query: 124 ------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVINF 183
                        S AL+QD  AG +++ +KIDG VRWKVG++++GRY+ H NCP  I  
Sbjct: 125 FLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITL 184

Query: 184 GAYPANGDGSMVQYNVKYQVVQRCDVSV 189
             +  +GDG      VKYQ+VQRC V V
Sbjct: 185 AGH-FSGDGPA----VKYQLVQRCAVDV 206

[Close]

BLAST of IVF0018436 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-41
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 18  KLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF-------PHL---HFLLTISS 77
           ++ G IIG FI +VL+TI +VW +L+PTKP F LQD T        P+L   +F +TI+S
Sbjct: 20  RICGVIIG-FIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIAS 79

Query: 78  RNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVNVWS-------------LS 137
           RN N RIGIYYD LHVYA YRNQQITLRT IP  YQGHK+ NVWS              +
Sbjct: 80  RNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNA 139

Query: 138 SALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPVVINFGAYPANGDGSMVQY 189
            AL  ++N G + ++++ DG+VRWKVG+ ITG+Y  H  C   IN     A   G  V  
Sbjct: 140 VALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAA---GVHVGE 199

[Close]

BLAST of IVF0018436 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 161.8 bits (408), Expect = 5.5e-40
Identity = 92/212 (43.40%), Postives = 129/212 (60.85%), Query Frame = 0


Query: 2   AYDCEKHCKKKRKKLIKLIGAIIGVFIFLVLLTILIVWAVLRPTKPTFFLQDVTF----- 61
           ++D    C +      K++   I + + L+L+ IL+VWA+L+P+KP F LQD T      
Sbjct: 8   SHDSHSSCNR------KIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNV 67

Query: 62  ----PHL---HFLLTISSRNPNRRIGIYYDELHVYAIYRNQQITLRTIIPRFYQGHKDVN 121
               P+L   +F  T+SSRNPN +IGIYYD L VYA YR+QQITL + +   YQGHK+VN
Sbjct: 68  SGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVN 127

Query: 122 VWS-------------LSSALNQDRNAGALMILVKIDGKVRWKVGSFITGRYQFHANCPV 181
           VWS              +  L+QD ++GA+M+++ +DG+VRWKVGSFITG+Y  H  C  
Sbjct: 128 VWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHA 187

Query: 182 VINFGAYPANGDGSMVQYNVKYQVVQRCDVSV 189
           +INFG+  A   G +V    KY + + C VSV
Sbjct: 188 LINFGSSAA---GVIVG---KYMLTETCSVSV 207

The following BLAST results are available for this feature:

BLAST of IVF0018436 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	3.0e-43	45.50	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	3.1e-40	48.21	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	2.6e-26	36.41	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9FNH6	2.3e-11	28.49	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	6.8e-11	29.88	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of IVF0018436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRJ4	5.1e-94	86.73	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DNV1	5.1e-94	86.73	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B6T7	5.1e-94	86.73	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103486673 PE=4 SV=1	[more]
A0A0A0LB20	3.6e-92	83.89	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779770 PE=4 ...	[more]
A0A6J1KW28	1.1e-80	72.99	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111498712 PE=4 SV=1	[more]

BLAST of IVF0018436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442910.2	6.63e-122	86.73	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >TYK25313.1 NDR1/HIN1-like p...	[more]
KAA0043819.1	7.18e-121	86.73	NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]	[more]
XP_004136510.1	1.82e-119	83.89	NDR1/HIN1-like protein 1 [Cucumis sativus]	[more]
XP_038906208.1	2.12e-118	83.89	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]
XP_022946929.1	2.21e-104	72.99	NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023540735.1 NDR1/HIN1-like pro...	[more]

BLAST of IVF0018436 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11660.1	2.1e-44	45.50	NDR1/HIN1-like 1	[more]
AT3G52470.1	5.3e-43	47.64	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G44220.1	7.6e-42	44.23	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	2.2e-41	48.21	NDR1/HIN1-like 12	[more]
AT5G06330.1	5.5e-40	43.40	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 64..154 e-value: 8.8E-10 score: 39.1
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 6..188
None	No IPR available	PANTHER	PTHR31415:SF107	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 6..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0018436.1	IVF0018436.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma