IVF0018028 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTAAAAAGCACTTATTCTTCAAACTCCTCCTCTGTTGAGAAGAAACAAATCTGAGGTTTCATTTCTCTCATCTGAAAGATCAAAACACAATGAGAACTCAGCTTTTGCTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGGTACTTCCTCTCTCTCTCTCTTTCTTCTTTTCTTTCCTCTCTTCTTCAACATTCAATCCAATCCATCCCATTTTCTGTTCAACCCACTTCTCAATCACTTGAAAACAATTGAACTTCATATAATATTAATATTGATTTTAAATGGTGAAAACTATTTTCCAAACTGATTTTGAAAATCACACAAACCATTTTAATCATACCTAGAGATTATTATGAAAATATGGCATGTCTAAGTAATTATATAGTTCAGATCTAGTTAACAACTTAGATATAACGTAGGGAGAATGCATAAAAATCTAACAACTTGCAACTCTTCTCCACTAGAATCAACATATAATTATGTAAAACGTGACCAAAGTTCATGTTTCTAAATCTTACAAAGCATATATGTACTAAATGACGACCCACGATGAGTTCAAACTATAGTAATCATCCCCTTAAGATTTAGTATCATATGCAAGTAATTTTCTTATTCAAGTAAGCAAAATTGATTACGAGTGATGAAATGTAAAATGTGCTCGGGGTTGGGGGGGGCAGACCGGTGCACGAGACCGTGTAGGAAGAGGTGTTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGCAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCATTAGAGGCAGGGCCAAATGCCCTTAAACTTTTAAGAGACCGTTTGCATTTATTGTCTGTCCCTTATTATTATGAAATCAAATAATATAAGCCAACCTAAAATAGTACTATAGAAATGAAATGAGACCAAAATAATTTTGTGTCTGATATGAATATTAAATGCTTCAAAGTTTGAATTGTGAGATTTGGTGTGCTTTTT GTTTTAAAAAGCACTTATTCTTCAAACTCCTCCTCTGTTGAGAAGAAACAAATCTGAGGTTTCATTTCTCTCATCTGAAAGATCAAAACACAATGAGAACTCAGCTTTTGCTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACGAGACCGTGTAGGAAGAGGTGTTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGCAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCATTAGAGGCAGGGCCAAATGCCCTTAAACTTTTAAGAGACCGTTTGCATTTATTGTCTGTCCCTTATTATTATGAAATCAAATAATATAAGCCAACCTAAAATAGTACTATAGAAATGAAATGAGACCAAAATAATTTTGTGTCTGATATGAATATTAAATGCTTCAAAGTTTGAATTGTGAGATTTGGTGTGCTTTTT ATGAGAACTCAGCTTTTGCTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACGAGACCGTGTAGGAAGAGGTGTTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGCAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCATTAGAGGCAGGGCCAAATGCCCTTAA MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP Homology
BLAST of IVF0018028 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.6e-16 Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.8e-12 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.8e-12 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy Swiss-Prot
Match: C0HLQ1 (Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-11 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-11 Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy TrEMBL
Match: A0A0A0K2Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071570 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42 Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy TrEMBL
Match: A0A5N6QLL9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004614 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16 Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy TrEMBL
Match: A0A1S4CE27 (peamaclein-like OS=Nicotiana tabacum OX=4097 GN=LOC107818016 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy TrEMBL
Match: A0A2I0KSA4 (peamaclein-like OS=Punica granatum OX=22663 GN=LOC116194728 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of IVF0018028 vs. ExPASy TrEMBL
Match: A0A5D3E0A6 (Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00810 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.8e-16 Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of IVF0018028 vs. NCBI nr
Match: KAG7022485.1 (Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154 bits (389), Expect = 8.65e-47 Identity = 71/88 (80.68%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of IVF0018028 vs. NCBI nr
Match: KAG6588701.1 (Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129 bits (323), Expect = 5.54e-37 Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of IVF0018028 vs. NCBI nr
Match: XP_021683427.1 (snakin-1-like [Hevea brasiliensis]) HSP 1 Score: 92.0 bits (227), Expect = 4.26e-22 Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of IVF0018028 vs. NCBI nr
Match: KAE8008067.1 (hypothetical protein FH972_004614 [Carpinus fangiana]) HSP 1 Score: 91.7 bits (226), Expect = 6.05e-22 Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of IVF0018028 vs. NCBI nr
Match: XP_016499410.1 (PREDICTED: peamaclein-like [Nicotiana tabacum]) HSP 1 Score: 91.7 bits (226), Expect = 6.22e-22 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of IVF0018028 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.7e-13 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of IVF0018028 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.7e-13 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of IVF0018028 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein ) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of IVF0018028 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein ) HSP 1 Score: 60.5 bits (145), Expect = 8.0e-10 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of IVF0018028 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 ) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09 Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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