IVF0018006 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTTCAGCCAAGAGGATCTTCATCTTCATCTTCTCAAATATGATGCAATCGAGAAGGTCGTCATCTCAAATGTGGTGCAGTCGAGACGATCATCATCTTCATCTTCATCTTCTCACATGTGTTGTAGCCCAGAGGGTTTTCATCTTCATTTTCTCACATGTGTTGCAGCCGAGAGGATTATCATCTTCATCTTCTCACATGTGTTGCGGTAAAGAGGATCTACATTTTTTATCTTCTCACATGTGTTGCAGTCGAGAAAGTTGTCGTCTCAAATATGTTACAGCCGAGAATGTCATCATCTCAAATATGTTGCAGTCGAGAAAGTCATCGTCTCAAATATGTTACAGTCAAGAATGCCGTCGTCTCAAATATGTTGTAGTCGAGAATGTCGTCGTCTCAAATATGTTGTAGTCGAGCAGATCGTCATCTCAAATATGTTGCAGTTGAGAAGGCAGTCGTCTCAAATATGTTGCGATCGAGAAGATCTTTGTTCTTACATATGTTATGGTCGAAAAGATCGTCGTCTTAA ATGCGTTTCAGCCAAGAGGATCTTCATCTTCATCTTCTCAAATATGATGCAATCGAGAAGGTCGTCATCTCAAATGTGGTGCAGTCGAGACGATCATCATCTTCATCTTCATCTTCTCACATGTGTTGTAGCCCAGAGGTCGAGAAAGTTGTCGTCTCAAATATGTTACAGCCGAGAATGTCATCATCTCAAATATGTTGCAGTCGAGAAAGTCATCGTCTCAAATATGTTACATCGAGAATGTCGTCGTCTCAAATATGTTGTAGTCGAGCAGATCGTCATCTCAAATATGTTGCAGTTGAGAAGGCAGTCGTCTCAAATATGTTGCGATCGAGAAGATCTTTGTTCTTACATATGTTATGGTCGAAAAGATCGTCGTCTTAA ATGCGTTTCAGCCAAGAGGATCTTCATCTTCATCTTCTCAAATATGATGCAATCGAGAAGGTCGTCATCTCAAATGTGGTGCAGTCGAGACGATCATCATCTTCATCTTCATCTTCTCACATGTGTTGTAGCCCAGAGGTCGAGAAAGTTGTCGTCTCAAATATGTTACAGCCGAGAATGTCATCATCTCAAATATGTTGCAGTCGAGAAAGTCATCGTCTCAAATATGTTACATCGAGAATGTCGTCGTCTCAAATATGTTGTAGTCGAGCAGATCGTCATCTCAAATATGTTGCAGTTGAGAAGGCAGTCGTCTCAAATATGTTGCGATCGAGAAGATCTTTGTTCTTACATATGTTATGGTCGAAAAGATCGTCGTCTTAA MRFSQEDLHLHLLKYDAIEKVVISNVVQSRRSSSSSSSSHMCCSPEVEKVVVSNMLQPRMSSSQICCSRESHRLKYVTSRMSSSQICCSRADRHLKYVAVEKAVVSNMLRSRRSLFLHMLWSKRSSS Homology
BLAST of IVF0018006 vs. ExPASy TrEMBL
Match: A0A5D3DBL7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00230 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 8.6e-29 Identity = 83/139 (59.71%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of IVF0018006 vs. ExPASy TrEMBL
Match: A0A5A7VE10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001670 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22 Identity = 73/131 (55.73%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of IVF0018006 vs. ExPASy TrEMBL
Match: A0A5A7SQ83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00740 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21 Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 0
BLAST of IVF0018006 vs. ExPASy TrEMBL
Match: A0A5D3C2C8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002110 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17 Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of IVF0018006 vs. ExPASy TrEMBL
Match: A0A5A7UEK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004640 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17 Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of IVF0018006 vs. NCBI nr
Match: KAA0065363.1 (Retrotransposon gag protein [Cucumis melo var. makuwa] >TYK20860.1 Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 137 bits (345), Expect = 4.37e-36 Identity = 81/121 (66.94%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of IVF0018006 vs. NCBI nr
Match: KAA0066592.1 (hypothetical protein E6C27_scaffold25G001670 [Cucumis melo var. makuwa]) HSP 1 Score: 114 bits (284), Expect = 3.10e-29 Identity = 73/131 (55.73%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of IVF0018006 vs. NCBI nr
Match: KAA0032176.1 (hypothetical protein E6C27_scaffold452G00990 [Cucumis melo var. makuwa] >TYK14421.1 hypothetical protein E5676_scaffold186G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (283), Expect = 1.48e-27 Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 0
BLAST of IVF0018006 vs. NCBI nr
Match: KAA0051981.1 (hypothetical protein E6C27_scaffold60G004640 [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 1.81e-21 Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of IVF0018006 vs. NCBI nr
Match: TYK04576.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 7.75e-21 Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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