IVF0017891 (gene) Melon (IVF77) v1

Overview


Name	IVF0017891
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PB1 domain-containing protein
Location	chr05: 21244602 .. 21244879 (+)
RNA-Seq Expression	IVF0017891
Synteny	IVF0017891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCAAGTATCAGTTAGTTCTTGAAGATCTTGATGTTTTGGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATGGCTTGATGAGTATGATTGCCTAGAAAGTGAAGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAAATTTCATTAAGGCTCAACCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

mRNA sequence

ATGGTTCTCAAGTATCAGTTAGTTCTTGAAGATCTTGATGTTTTGGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAAATTTCATTAAGGCTCAACCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

Coding sequence (CDS)

ATGGTTCTCAAGTATCAGTTAGTTCTTGAAGATCTTGATGTTTTGGTCTCTGTAAGGTCTGATGAGGATTTAAAGCATGGAAAGCTTCAATGTTTCTTATTTCCTTCAAATCCAAATTTCATTAAGGCTCAACCATTCTCCTCAAATCCCCAGCAAATCGAGCAACGTTATTTTGAAGCTATCAATGGCATTGTATGGTCTGGCTCCTTTGCCAATGTAAAACTCTCCCGTAGTACCGCTAACTGA

Protein sequence

MVLKYQLVLEDLDVLVSVRSDEDLKHGKLQCFLFPSNPNFIKAQPFSSNPQQIEQRYFEAINGIVWSGSFANVKLSRSTAN

Homology

[Close]

BLAST of IVF0017891 vs. ExPASy TrEMBL
Match: A0A5D3E246 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00090 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.7e-34
Identity = 80/92 (86.96%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKH           GKLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 82
          PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. ExPASy TrEMBL
Match: A0A5A7UL31 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00210 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 78/92 (84.78%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKH           GKLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRIDGYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 82
          PQQIEQRYFEAINGIVWSGSFANVKLSR TAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRCTAN 92

[Close]

BLAST of IVF0017891 vs. ExPASy TrEMBL
Match: A0A5A7U7T5 (PB1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002390 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32
Identity = 77/92 (83.70%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKH            KLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRLDEYDCLESERKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 82
          PQQIEQRYFEAIN IVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. ExPASy TrEMBL
Match: A0A5A7T2V3 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00140 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.5e-29
Identity = 76/92 (82.61%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKH           GKLQ FLFPSNP FIKAQ FSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQFFLFPSNPIFIKAQSFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 82
          PQQIEQRYFEAIN IV SGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVRSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. ExPASy TrEMBL
Match: A0A5A7T3H0 (Tub domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00470 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.0e-24
Identity = 60/75 (80.00%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 18  VRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSNPQQIEQRYFEAINGIVW 77
           +RSDEDLKH           GKLQCFLFPSNP FI+AQPFSSNPQQIEQRYFEAINGIVW
Sbjct: 101 LRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIEAQPFSSNPQQIEQRYFEAINGIVW 160

Query: 78  SGSFANVKLSRSTAN 82
           SGSFANVKLS STAN
Sbjct: 161 SGSFANVKLSHSTAN 175

[Close]

BLAST of IVF0017891 vs. NCBI nr
Match: KAA0053093.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >KAA0065720.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >TYK29946.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 1.21e-45
Identity = 80/92 (86.96%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKH           GKLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 81
          PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. NCBI nr
Match: KAA0056522.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >TYK12092.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (375), Expect = 9.98e-45
Identity = 78/92 (84.78%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKH           GKLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRIDGYDCLESEGKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 81
          PQQIEQRYFEAINGIVWSGSFANVKLSR TAN
Sbjct: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRCTAN 92

[Close]

BLAST of IVF0017891 vs. NCBI nr
Match: KAA0051822.1 (hypothetical protein E6C27_scaffold60G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 3.35e-43
Identity = 77/92 (83.70%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHG-----------KLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVS+RSDEDLKH            KLQCFLFPSNP FIKAQPFSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSIRSDEDLKHRLDEYDCLESERKLQCFLFPSNPIFIKAQPFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 81
          PQQIEQRYFEAIN IVWSGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVWSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. NCBI nr
Match: KAA0037802.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (341), Expect = 1.53e-39
Identity = 76/92 (82.61%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MVLKYQLVLEDLDVLVSVRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSN 60
          MVLKYQLVLEDLDVLVSVRSDEDLKH           GKLQ FLFPSNP FIKAQ FSSN
Sbjct: 1  MVLKYQLVLEDLDVLVSVRSDEDLKHRLDEYDCLESEGKLQFFLFPSNPIFIKAQSFSSN 60

Query: 61 PQQIEQRYFEAINGIVWSGSFANVKLSRSTAN 81
          PQQIEQRYFEAIN IV SGSFANVKLSRSTAN
Sbjct: 61 PQQIEQRYFEAINDIVRSGSFANVKLSRSTAN 92

[Close]

BLAST of IVF0017891 vs. NCBI nr
Match: KAA0037880.1 (uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 8.68e-32
Identity = 60/75 (80.00%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 18  VRSDEDLKH-----------GKLQCFLFPSNPNFIKAQPFSSNPQQIEQRYFEAINGIVW 77
           +RSDEDLKH           GKLQCFLFPSNP FI+AQPFSSNPQQIEQRYFEAINGIVW
Sbjct: 101 LRSDEDLKHRLDEYDCLESEGKLQCFLFPSNPIFIEAQPFSSNPQQIEQRYFEAINGIVW 160

Query: 78  SGSFANVKLSRSTAN 81
           SGSFANVKLS STAN
Sbjct: 161 SGSFANVKLSHSTAN 175

[Close]

BLAST of IVF0017891 vs. TAIR 10
Match: AT5G49920.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 77.0 bits (188), Expect = 7.6e-15
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKH----------GKLQCFLFPSNPNFIKAQPFSSNP 60
           +VLKYQ++ EDLD LVSV+SDED+KH           KL+ FLFP+NP  +++Q     P
Sbjct: 62  IVLKYQIIPEDLDALVSVKSDEDVKHMIEEYNRHETPKLRTFLFPANPVVLESQLGPIEP 121

Query: 61  QQIEQRYFEAINGIV 66
           Q IEQRY EAINGI+
Sbjct: 122 QTIEQRYIEAINGIL 136

[Close]

BLAST of IVF0017891 vs. TAIR 10
Match: AT3G46920.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 44.3 bits (103), Expect = 5.5e-05
Identity = 33/87 (37.93%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKH----------------GKLQCFLFPSNPNFIKAQ 60
           +V+KYQL  EDLD LVSV S ED+ +                GKL+ FLF ++ + +   
Sbjct: 127 VVVKYQLPDEDLDALVSVSSSEDIDNMMEEFEKLVERSSDGSGKLRVFLFDASSSEVD-D 186

Query: 61  PFS----SNPQQIEQRYFEAINGIVWS 68
            F      +   I QRY EA+NG+V S
Sbjct: 187 SFGILEYGDGVDIGQRYVEAVNGVVVS 212

[Close]

BLAST of IVF0017891 vs. TAIR 10
Match: AT2G35050.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 3   LKYQLVLEDLDVLVSVRSDEDLKHGKLQCFLFPSNPNFIKAQPFSSNPQQIEQRYF 59
           +KYQL  EDLD LVSV SDEDL++   +C +F  N    K + F  +   IE+  F
Sbjct: 231 IKYQLPGEDLDALVSVSSDEDLQNMMEECIVF-GNGGSEKPRMFLFSSSDIEEAQF 285

[Close]

BLAST of IVF0017891 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0


Query: 1   MVLKYQLVLEDLDVLVSVRSDEDLKH---------------GKLQCFLFPSNPNFIKAQP 60
           +  KYQL  EDLD L+SV +D+DL+H                +++ FLFP++  F     
Sbjct: 103 VTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLLRLSSKPARMRLFLFPASSGF----G 162

Query: 61  FSSNPQQIEQRYFEAINGI 65
             S+ Q    R+ EA+N +
Sbjct: 163 SQSSTQSDRDRFVEALNTV 177

[Close]

BLAST of IVF0017891 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 40.8 bits (94), Expect = 6.1e-04
Identity = 22/50 (44.00%), Postives = 29/50 (58.00%), Query Frame = 0


Query: 4   KYQLVLEDLDVLVSVRSDEDLKH---------------GKLQCFLFPSNP 39
           KYQL  EDLD L+SV +DEDL+H                +++ FLFPS+P
Sbjct: 100 KYQLPGEDLDALISVTNDEDLEHMMHEYDRLLRLSTKPARMRLFLFPSSP 149

The following BLAST results are available for this feature:

BLAST of IVF0017891 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0017891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E246	5.7e-34	86.96	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7UL31	2.8e-33	84.78	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7U7T5	4.1e-32	83.70	PB1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7T2V3	2.5e-29	82.61	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A5A7T3H0	7.0e-24	80.00	Tub domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of IVF0017891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053093.1	1.21e-45	86.96	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0056522.1	9.98e-45	84.78	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0051822.1	3.35e-43	83.70	hypothetical protein E6C27_scaffold60G002390 [Cucumis melo var. makuwa]	[more]
KAA0037802.1	1.53e-39	82.61	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAA0037880.1	8.68e-32	80.00	uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0017891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49920.1	7.6e-15	54.67	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G46920.1	5.5e-05	37.93	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]
AT2G35050.1	1.6e-04	44.64	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]
AT5G64430.1	1.6e-04	32.91	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G09620.1	6.1e-04	44.00	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR31066:SF47	OS05G0427100 PROTEIN	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017891.1	IVF0017891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane