IVF0017782 (gene) Melon (IVF77) v1

Overview


Name	IVF0017782
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 15616624 .. 15617031 (-)
RNA-Seq Expression	IVF0017782
Synteny	IVF0017782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCGGAAAAAGGAAGTCCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGAAATGGATTTAGGGTTTACCACAGTAATCCGATCCAGATCAAGATCGTCCAGCATACGGACTGAGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTGGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAATCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

mRNA sequence

ATGAGTTCGGAAAAAGGAAGTCCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGAAATGGATTTAGGGTTTACCACAGTAATCCGATCCAGATCAAGATCGTCCAGCATACGGACTGAGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTGGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAATCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

Coding sequence (CDS)

ATGAGTTCGGAAAAAGGAAGTCCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGAAATGGATTTAGGGTTTACCACAGTAATCCGATCCAGATCAAGATCGTCCAGCATACGGACTGAGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTGGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAATCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

Protein sequence

MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTESPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKIKSYFQKPIVVYDPII

Homology

[Close]

BLAST of IVF0017782 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.3e-62
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRPLANLIRPSG VVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQKPIVVYDPII
Sbjct: 121 KSYFQKPIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. ExPASy TrEMBL
Match: A0A5A7URC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00720 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56
Identity = 125/135 (92.59%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGS RGRTNSTSSKGN PSSSSNSA SPM++DQY MDL FTTV RSRSRSSSIRT 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRPLANLIRPSGGVVQMRPP SPSSNRESSTPPTTYSQAVTPDKRFVPRPKI
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQKPIVVYDPII
Sbjct: 121 KSYFQKPIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.7e-52
Identity = 118/135 (87.41%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSS+KGS RGRTNSTSSKGNRP SSSNSAPSP+SADQY MDLGFTTV R  SRS  I   
Sbjct: 1   MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP  NLIRPS GVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRP+I
Sbjct: 61  SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQKPIVVYDPII
Sbjct: 121 KSYFQKPIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.5e-51
Identity = 118/135 (87.41%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGS RGRTNSTSSKG+RPSSSSNS PSPMSA QY MDLGFT V RSRSR SSI   
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP  NLIRPSGGV+QMRPPASPSSNRESSTPPTTYSQAVT DKRFVPRP+I
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKSIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. ExPASy TrEMBL
Match: A0A5A7UFZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1248G00100 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.0e-49
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSS+KGS RGRTNSTSSKGNRPSSSSN APSPMS DQY M LGFTT+ +S+SRSS IR  
Sbjct: 1   MSSKKGSARGRTNSTSSKGNRPSSSSNFAPSPMSVDQYAMHLGFTTLTQSKSRSSGIRIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTES TPPRPLANLIRPSG VVQMR P SP SNRESSTPPTTYSQAVTPDKRFVPR +I
Sbjct: 61  SPTESLTPPRPLANLIRPSGKVVQMRFPTSPLSNRESSTPPTTYSQAVTPDKRFVPRLEI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQKP VVYDPII
Sbjct: 121 KSYFQKPTVVYDPII 135

[Close]

BLAST of IVF0017782 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (631), Expect = 3.29e-82
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE
Sbjct: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRPLANLIRPSG VVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI
Sbjct: 61  SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 135
           KSYFQKPIVVYDPII
Sbjct: 121 KSYFQKPIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (582), Expect = 9.74e-75
Identity = 125/135 (92.59%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGS RGRTNSTSSKGN PSSSSNSA SPM++DQY MDL FTTV RSRSRSSSIRT 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRPLANLIRPSGGVVQMRPP SPSSNRESSTPPTTYSQAVTPDKRFVPRPKI
Sbjct: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 135
           KSYFQKPIVVYDPII
Sbjct: 121 KSYFQKPIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 210 bits (535), Expect = 4.34e-67
Identity = 118/135 (87.41%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSSEKGS RGRTNSTSSKG+RPSSSSNS PSPMSA QY MDLGFT V RSRSR SSI   
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP  NLIRPSGGV+QMRPPASPSSNRESSTPPTTYSQAVT DKRFVPRP+I
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 135
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKSIVVYDPII 135

[Close]

BLAST of IVF0017782 vs. NCBI nr
Match: KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (515), Expect = 4.36e-64
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSS+KG+ RGRTNSTSSKGNR SSSSNSAPSPMSADQY MDLGFT V RSRSR S I   
Sbjct: 1   MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
            PTESSTPPRP ANLIRP G VVQM+PPASPSSNR+SSTPPTTYSQAVTPDKRFVPRPKI
Sbjct: 61  FPTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 135
           K YFQK IVVYDP I
Sbjct: 121 KFYFQKSIVVYDPTI 135

[Close]

BLAST of IVF0017782 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (514), Expect = 8.03e-64
Identity = 113/135 (83.70%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60
           MSS+KGS RGRTNSTSSKGN  SSSSNSAPSP  ADQY M++GFTTV RSRSRSS+IR  
Sbjct: 1   MSSKKGSARGRTNSTSSKGNHASSSSNSAPSPTGADQYAMEVGFTTVTRSRSRSSNIRIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           S TES+TPPRP  NLI PS GVVQMRPPASPSSNRESSTP TTYSQAVTPDKRFVPRP+I
Sbjct: 61  SLTESTTPPRPSVNLIHPSSGVVQMRPPASPSSNRESSTPSTTYSQAVTPDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 135
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKLIVVYDPII 135

The following BLAST results are available for this feature:

BLAST of IVF0017782 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0017782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKX1	6.3e-62	99.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7URC1	3.0e-56	92.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TM80	7.7e-52	87.41	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
E5GCE6	8.5e-51	87.41	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7UFZ9	8.0e-49	84.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0017782 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11076.1	3.29e-82	99.26	hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]	[more]
KAA0056175.1	9.74e-75	92.59	hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]	[more]
ADN34145.1	4.34e-67	87.41	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0026217.1	4.36e-64	84.44	hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK3073...	[more]
KAA0066384.1	8.03e-64	83.70	hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK0090...	[more]

BLAST of IVF0017782 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017782.1	IVF0017782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding