Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAGATTAAACGACATAAATAAAGAATTGAAAAATAAGAAACACGATGGAAAGAAATCGCAGAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACGGGGAAGACAAAATAACAGAAGAAAGACGAATTGCAAGGAAGAAAAGAAAGATAGAAGGGCAAATCTGA mRNA sequence ATGGAGAGATTAAACGACATAAATAAAGAATTGAAAAATAAGAAACACGATGGAAAGAAATCGCAGAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACGGGGAAGACAAAATAACAGAAGAAAGACGAATTGCAAGGAAGAAAAGAAAGATAGAAGGGCAAATCTGA Coding sequence (CDS) ATGGAGAGATTAAACGACATAAATAAAGAATTGAAAAATAAGAAACACGATGGAAAGAAATCGCAGAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACGGGGAAGACAAAATAACAGAAGAAAGACGAATTGCAAGGAAGAAAAGAAAGATAGAAGGGCAAATCTGA Protein sequence MERLNDINKELKNKKHDGKKSQKRKREKKKDEIAGEDGEDKITEERRIARKKRKIEGQI
Homology
BLAST of IVF0017766 vs. NCBI nr
Match: KAA0033511.1 (hypothetical protein E6C27_scaffold261G00530 [Cucumis melo var. makuwa]) HSP 1 Score: 47.0 bits (110), Expect = 5.11e-04 Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 0 Query: 21 SQKRKREKKKDEIAGEDGEDKITEERRIARKKRKIEGQ 58 ++K+++E KKDEIAGEDG+D+IT RRIARK RK+EGQ Sbjct: 5 NRKKEKENKKDEIAGEDGKDEITGGRRIARKNRKMEGQ 42
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0033511.1 | 5.11e-04 | 68.42 | hypothetical protein E6C27_scaffold261G00530 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 1..21 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..44 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..15 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 27..44 |
Relationships
The following mRNA feature(s) are a part of this gene:
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