IVF0017475 (gene) Melon (IVF77) v1

Overview
NameIVF0017475
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 7906522 .. 7906817 (+)
RNA-Seq ExpressionIVF0017475
SyntenyIVF0017475
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGAGTCTTCCACAGAGTCATCAACTCCACCTAGGCCTTCGGCCAATCTTATCCGTCCTTTTGGCGGAGCCGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAAACTGTCACCCCCGATAAACGGTTTGTGCCAAGACCCGAAATCAAATCTTATTTTCAAAAGTCTATCGTTGTTTATGATCTTATCATAGAACCTGA

mRNA sequence

ATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGAGTCTTCCACAGAGTCATCAACTCCACCTAGGCCTTCGGCCAATCTTATCCGTCCTTTTGGCGGAGCCGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAAACTGTCACCCCCGATAAACGAACCTGA

Coding sequence (CDS)

ATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGATTGAGTCTTCCACAGAGTCATCAACTCCACCTAGGCCTTCGGCCAATCTTATCCGTCCTTTTGGCGGAGCCGTTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAAACTGTCACCCCCGATAAACGAACCTGA

Protein sequence

MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESSTPPTTYSQTVTPDKRT
Homology
BLAST of IVF0017475 vs. ExPASy TrEMBL
Match: A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-29
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
          MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST
Sbjct: 8  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 67

Query: 61 PPTTYSQTVTPDKR 75
          PPTTYSQTVTPDKR
Sbjct: 68 PPTTYSQTVTPDKR 81

BLAST of IVF0017475 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.4e-24
Identity = 66/74 (89.19%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDLGFTTV RSRSRSSSIR ES TESSTPPRP ANLIRP G  VQMRPPASPSSNRESST
Sbjct: 40  MDLGFTTVIRSRSRSSSIRTESPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESST 99

Query: 61  PPTTYSQTVTPDKR 75
           PPTTYSQ VTPDKR
Sbjct: 100 PPTTYSQAVTPDKR 113

BLAST of IVF0017475 vs. ExPASy TrEMBL
Match: A0A5A7URC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00720 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23
Identity = 65/74 (87.84%), Postives = 65/74 (87.84%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDL FTTVTRSRSRSSSIR  S TESSTPPRP ANLIRP GG VQMRPP SPSSNRESST
Sbjct: 40  MDLEFTTVTRSRSRSSSIRTGSPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESST 99

Query: 61  PPTTYSQTVTPDKR 75
           PPTTYSQ VTPDKR
Sbjct: 100 PPTTYSQAVTPDKR 113

BLAST of IVF0017475 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 64/75 (85.33%), Postives = 67/75 (89.33%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDLGFTTVTRSRSRSSSIRI S TESSTPP+PS NLIRP GG VQMR P SPSSNR+SST
Sbjct: 40  MDLGFTTVTRSRSRSSSIRIGSPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSST 99

Query: 61  PPTTYSQTVTPDKRT 76
           PPTTYSQ VTPDKR+
Sbjct: 100 PPTTYSQAVTPDKRS 114

BLAST of IVF0017475 vs. ExPASy TrEMBL
Match: A0A5A7V3Q0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00760 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23
Identity = 65/74 (87.84%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
          MDLGFTTVTRSRSRSS IRI S TESSTPPRPSANLIRP G  VQMRP ASPSSNRESST
Sbjct: 8  MDLGFTTVTRSRSRSSDIRIGSPTESSTPPRPSANLIRPSGRVVQMRPHASPSSNRESST 67

Query: 61 PPTTYSQTVTPDKR 75
          PPTTYSQ VTP+KR
Sbjct: 68 PPTTYSQAVTPNKR 81

BLAST of IVF0017475 vs. NCBI nr
Match: KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 1.83e-39
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
          MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST
Sbjct: 8  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 67

Query: 61 PPTTYSQTVTPDKR 74
          PPTTYSQTVTPDKR
Sbjct: 68 PPTTYSQTVTPDKR 81

BLAST of IVF0017475 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 2.17e-32
Identity = 66/74 (89.19%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDLGFTTV RSRSRSSSIR ES TESSTPPRP ANLIRP G  VQMRPPASPSSNRESST
Sbjct: 40  MDLGFTTVIRSRSRSSSIRTESPTESSTPPRPLANLIRPSGRVVQMRPPASPSSNRESST 99

Query: 61  PPTTYSQTVTPDKR 74
           PPTTYSQ VTPDKR
Sbjct: 100 PPTTYSQAVTPDKR 113

BLAST of IVF0017475 vs. NCBI nr
Match: KAA0056175.1 (hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 1.25e-31
Identity = 65/74 (87.84%), Postives = 65/74 (87.84%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDL FTTVTRSRSRSSSIR  S TESSTPPRP ANLIRP GG VQMRPP SPSSNRESST
Sbjct: 40  MDLEFTTVTRSRSRSSSIRTGSPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESST 99

Query: 61  PPTTYSQTVTPDKR 74
           PPTTYSQ VTPDKR
Sbjct: 100 PPTTYSQAVTPDKR 113

BLAST of IVF0017475 vs. NCBI nr
Match: KAA0060485.1 (hypothetical protein E6C27_scaffold22G003180 [Cucumis melo var. makuwa] >TYK18570.1 hypothetical protein E5676_scaffold119G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 1.36e-31
Identity = 65/74 (87.84%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1  MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
          MDLGFTTVTRSRSRSS IRI S TESSTPPRPSANLIRP G  VQMRP ASPSSNRESST
Sbjct: 8  MDLGFTTVTRSRSRSSDIRIGSPTESSTPPRPSANLIRPSGRVVQMRPHASPSSNRESST 67

Query: 61 PPTTYSQTVTPDKR 74
          PPTTYSQ VTP+KR
Sbjct: 68 PPTTYSQAVTPNKR 81

BLAST of IVF0017475 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 3.38e-31
Identity = 64/74 (86.49%), Postives = 66/74 (89.19%), Query Frame = 0

Query: 1   MDLGFTTVTRSRSRSSSIRIESSTESSTPPRPSANLIRPFGGAVQMRPPASPSSNRESST 60
           MDLGFTTVTRSRSRSSSIRI S TESSTPP+PS NLIRP GG VQMR P SPSSNR+SST
Sbjct: 40  MDLGFTTVTRSRSRSSSIRIGSPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSST 99

Query: 61  PPTTYSQTVTPDKR 74
           PPTTYSQ VTPDKR
Sbjct: 100 PPTTYSQAVTPDKR 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BM672.3e-29100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CKX16.4e-2489.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7URC12.5e-2387.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8A03.2e-2385.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V3Q05.5e-2387.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0066421.11.83e-39100.00hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK0086... [more]
TYK11076.12.17e-3289.19hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa][more]
KAA0056175.11.25e-3187.84hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa][more]
KAA0060485.11.36e-3187.84hypothetical protein E6C27_scaffold22G003180 [Cucumis melo var. makuwa] >TYK1857... [more]
KAA0049709.13.38e-3186.49hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017475.1IVF0017475.1mRNA