IVF0017283 (gene) Melon (IVF77) v1

Overview
NameIVF0017283
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationchr11: 840803 .. 842177 (+)
RNA-Seq ExpressionIVF0017283
SyntenyIVF0017283
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCGTCAGTGATCAAATAGGTTCTACTCTTCTTCATCTGACTCAGAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACAGTAGGAAGTTTTTATGTCAGATTTGAAAAATGGTCATTCGAAAAACACGCGGCCCGAAGACTGGTTCCTAGCTACGGTGGATGGGTAAACTTTAGAGGCATTCCTCTTTCAGCTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA

mRNA sequence

ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACACTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA

Coding sequence (CDS)

ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACACTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA

Protein sequence

MISPTVEIEPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQRLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGHVSSRNVSKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQERNTHQRENLSKKPTESNQYPMQISISFPYKWWSKEKKTEIVIYPLILAIFPQEKFK
Homology
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match: A0A5D3BSG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G001040 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 7.6e-119
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0

Query: 82  METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 141
           METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ
Sbjct: 1   METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 60

Query: 142 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 201
           RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV
Sbjct: 61  RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 120

Query: 202 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 261
           AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK
Sbjct: 121 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 180

Query: 262 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGH 303
           DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTK  H
Sbjct: 181 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKCVH 221

BLAST of IVF0017283 vs. ExPASy TrEMBL
Match: A0A5A7T0M9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00440 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-38
Identity = 117/357 (32.77%), Postives = 180/357 (50.42%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPLA---------------DQTSRRSYAQVLSEGYPSDSS----LDR 60
           M++P V+ EPK RPPL                  +SR+S A+V+SEGY SDS+       
Sbjct: 68  MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127

Query: 61  ERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFK 120
           +RS+ T P       +N ++ITRR FH DW  IMN+L+KQ +TSF++  FHA+KA++ F 
Sbjct: 128 QRSVKTLPL------ENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFS 187

Query: 121 DPTQAALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW----- 180
           +   A  LC+N  W+T+ +  +  +           L+ ++  W+  + +    W     
Sbjct: 188 EHQNAKSLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTF 247

Query: 181 --------------KPESKLDTII-------------LASNISIKDDNGHPFVVQTVTHE 240
                         K    +D +I             + + I IKD + H FVV TVT  
Sbjct: 248 LQIGNSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTIC 307

Query: 241 NKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELS 298
           + KWL +RDVKIHGSF+R+VAI+FD FN KAEQ+ F G+ A+ P K K+ ++ +++ EL+
Sbjct: 308 SGKWLAKRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELT 367

BLAST of IVF0017283 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.5e-37
Identity = 129/439 (29.38%), Postives = 209/439 (47.61%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPLADQTS------------RRSYAQVLSEGYP------------SD 60
           MI+P VE++ K RP    +TS            +RSYA+ ++EG P            SD
Sbjct: 179 MITPKVEVKAKTRPTFLPRTSPDCRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSD 238

Query: 61  SSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKA 120
           SS     S   SP+ +++E  NT++I RRFFH DW KI+  LRKQ E SF++ +FHA+KA
Sbjct: 239 SSHSSSNSFCDSPSSDLLE--NTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKA 298

Query: 121 IVTFKDPTQAALLCNNNEWSTLGRLILSSK--------LAMLVGAFWMWLRKQRLEQILW 180
           +V F     A LLC N  WST+G+  +  +           L+ ++  W   + +   LW
Sbjct: 299 LVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLW 358

Query: 181 --------------------KPESKLDTI------------ILASNISIKDDNGHPFVVQ 240
                               +  S  + I             L +N+ I D+ G+ F VQ
Sbjct: 359 NMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQ 418

Query: 241 TVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVI 300
            VTH   KWL ER+V++HG+F+R+ A  FDDFNP++EQ++F G+ A+ P+ +   S    
Sbjct: 419 VVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK 478

Query: 301 NELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKE---KRKGKEICLLQSINED--MEG 360
           +        L    I  D+ +      + E+ N           ++ +L  I+ D  ++ 
Sbjct: 479 SSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSNLHATANKSKLEILSGISNDGVLDK 538

Query: 361 DSHSMQTKVGHVSSRNV--SKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQ 369
               +  ++   S+ N+  SKRKVSF SP  KT I      P     +    + K++ ++
Sbjct: 539 GKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSR 598

BLAST of IVF0017283 vs. ExPASy TrEMBL
Match: A0A5D3E1T4 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00930 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 133/425 (31.29%), Postives = 202/425 (47.53%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPLA---------------DQTSRRSYAQVLSEGYPSDSSLDRERSL 60
           M++P V+ EPK RPPL                  +SR+S A+V+SEGY SDS+   E   
Sbjct: 68  MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127

Query: 61  STSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQ 120
             S  R  +E  N ++I RR FH DW  IMN+ +KQ ETSF++  FHA+KA++ F +   
Sbjct: 128 QISVKRLPLE--NAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQN 187

Query: 121 AALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW--------- 180
           A  LC+N  W+T+ +  +  +           L+ ++  W+  + +    W         
Sbjct: 188 AKSLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIG 247

Query: 181 ----------KPESKLDTII-------------LASNISIKDDNGHPFVVQTVTHENKKW 240
                     K    +D +I             + + I IKD +GH FVV TVT  + KW
Sbjct: 248 NSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKW 307

Query: 241 LTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELSHSSE 300
           L ERDVKIHGSF+R+VAI+FD FN KAEQ+ F  + A+ P K K+ ++ +++ EL++  +
Sbjct: 308 LAERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEED 367

Query: 301 NLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQ--TKVGH 360
                KI D    K SK  + +     E+   K   +  S +E+     HS +      +
Sbjct: 368 PTITKKIYDGDLPKSSK-KNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADN 427

Query: 361 VSSRNVSKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQERNTHQRE--NLS 366
            S R+  KRK  + +      +       +  QD++     KK  TQ  N+   E   + 
Sbjct: 428 ESLRSGGKRKEEYITDSSTDVV-------KETQDST----TKKVTTQNNNSTDFEGRGVQ 478

BLAST of IVF0017283 vs. ExPASy TrEMBL
Match: A0A5D3CTA3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00580 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-35
Identity = 115/344 (33.43%), Postives = 173/344 (50.29%), Query Frame = 0

Query: 9   EPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPT-REIIEEDNTIIITRRFF 68
           +P   PP  D   +RSYA+ + EG  SDSS     S + SP  +  +  DN +++ RRFF
Sbjct: 7   DPHYSPPSIDY-HKRSYAKAIYEGSSSDSSYS---SSTNSPVHKSPLSLDNEVVLVRRFF 66

Query: 69  HYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGR------- 128
           H +W KI+  L+KQ E  F++  FH++KA+V FK+P  A LLC N  WS +G+       
Sbjct: 67  HDNWQKIIRNLKKQTEKEFTYIPFHSEKALVNFKEPIPANLLCQNRGWSMVGKYFVKFEK 126

Query: 129 ----LILSSKLAMLVGAF----------WMWLRKQRLEQILW-----KPESKLDTII--- 188
               L  S KL    G +          W     Q++E++ W       E+K D+ +   
Sbjct: 127 WSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVDETKEDSNLIEA 186

Query: 189 -----------LASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDD 248
                      L +NI I D+ G+ F++Q VTH ++KWLTERDV +HG+F+R+ A  FD+
Sbjct: 187 KIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTFKRQAATTFDE 246

Query: 249 FNPKAEQYYFIGNTAVPPEKI--------KLKSKIVINELSHSSENLTMAKIIDDKGSKG 304
           F P +EQ++F GN A+  E +        KLK KIV          L    II+DK +  
Sbjct: 247 FKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVA---------LKFIIIINDKEATS 306

BLAST of IVF0017283 vs. NCBI nr
Match: KAA0045526.1 (hypothetical protein E6C27_scaffold243G00120 [Cucumis melo var. makuwa] >TYK02115.1 hypothetical protein E5676_scaffold680G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 436 bits (1120), Expect = 1.01e-150
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0

Query: 82  METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 141
           METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ
Sbjct: 1   METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 60

Query: 142 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 201
           RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV
Sbjct: 61  RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 120

Query: 202 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 261
           AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK
Sbjct: 121 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 180

Query: 262 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGH 302
           DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTK  H
Sbjct: 181 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKCVH 221

BLAST of IVF0017283 vs. NCBI nr
Match: KAA0035766.1 (hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 170 bits (431), Expect = 1.42e-43
Identity = 121/357 (33.89%), Postives = 182/357 (50.98%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPL------------ADQ---TSRRSYAQVLSEGYPSDSSLDRE--- 60
           M++P V+ EPK RPPL            AD    +SR+S A+V+SEGY SDS+   E   
Sbjct: 68  MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127

Query: 61  -RSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFK 120
            RS+ T P       +N ++ITRR FH DW  IMN+L+KQ +TSF++  FHA+KA++ F 
Sbjct: 128 QRSVKTLPL------ENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFS 187

Query: 121 DPTQAALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW----- 180
           +   A  LC+N  W+T+ +  +  +           L+ ++  W+  + +    W     
Sbjct: 188 EHQNAKSLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTF 247

Query: 181 --------------KPESKLDTIILA-------------SNISIKDDNGHPFVVQTVTHE 240
                         K    +D +I A             + I IKD + H FVV TVT  
Sbjct: 248 LQIGNSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTIC 307

Query: 241 NKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELS 297
           + KWL +RDVKIHGSF+R+VAI+FD FN KAEQ+ F G+ A+ P K K+ ++ +++ EL+
Sbjct: 308 SGKWLAKRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELT 367

BLAST of IVF0017283 vs. NCBI nr
Match: TYK29852.1 (hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (427), Expect = 5.25e-43
Identity = 125/373 (33.51%), Postives = 186/373 (49.87%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPL------------ADQ---TSRRSYAQVLSEGYPSDSSLDRERSL 60
           M++P V+ EPK RPPL            AD    +SR+S A+V+SEGY SDS+   E   
Sbjct: 68  MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127

Query: 61  STSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQ 120
             S  R  +E  N ++I RR FH DW  IMN+ +KQ ETSF++  FHA+KA++ F +   
Sbjct: 128 QISVKRLPLE--NAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQN 187

Query: 121 AALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW--------- 180
           A  LC+N  W+T+ +  +  +           L+ ++  W+  + +    W         
Sbjct: 188 AKSLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIG 247

Query: 181 ----------KPESKLDTIILA-------------SNISIKDDNGHPFVVQTVTHENKKW 240
                     K    +D +I A             + I IKD +GH FVV TVT  + KW
Sbjct: 248 NSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKW 307

Query: 241 LTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELSHSSE 300
           L ERDVKIHGSF+R+VAI+FD FN KAEQ+ F  + A+ P K K+ ++ +++ EL++  +
Sbjct: 308 LAERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEED 367

Query: 301 NLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQ--TKVGH 315
                KI D    K SK  + +     E+   K   +  S +E+     HS +      +
Sbjct: 368 PTITKKIYDGDLPKSSK-KNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADN 427

BLAST of IVF0017283 vs. NCBI nr
Match: KAA0038838.1 (hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK14264.1 hypothetical protein E5676_scaffold1121G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 1.71e-40
Identity = 107/306 (34.97%), Postives = 160/306 (52.29%), Query Frame = 0

Query: 9   EPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPTREI-IEEDNTIIITRRFF 68
           +P   PP  D   +RSYA+ + EG  SDSS     S + SP  +  +  DN +++ RRFF
Sbjct: 7   DPHYSPPSIDY-HKRSYAKAIYEGSSSDSSYS---SSTNSPVHKSPLSLDNEVVLVRRFF 66

Query: 69  HYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLIL---- 128
           H +W KI+  L+KQ E  F++  FH++KA+V FK+P  A LLC N  WS +G+  +    
Sbjct: 67  HDNWQKIIRNLKKQTEKEFTYIPFHSEKALVNFKEPIPANLLCQNRGWSMVGKYFVKFEK 126

Query: 129 -------SSKLAMLVGAF----------WMWLRKQRLEQILWK-----PESKLDTII--- 188
                  S KL    G +          W     Q++E++ W       E+K D+ +   
Sbjct: 127 WSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVDETKEDSNLIEA 186

Query: 189 -----------LASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDD 248
                      L +NI I D+ G+ F++Q VTH ++KWLTERDV +HG+F+R+ A  FD+
Sbjct: 187 KIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTFKRQAATTFDE 246

Query: 249 FNPKAEQYYFIGNTAVPPE------------KIK---LKSKIVIN--ELSHSSENLTMAK 256
           F P +EQ++F GN A+  E            KIK   LK  I+IN  E + S E+   +K
Sbjct: 247 FKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEATSSKEDKLKSK 306

BLAST of IVF0017283 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (418), Expect = 1.86e-40
Identity = 131/452 (28.98%), Postives = 216/452 (47.79%), Query Frame = 0

Query: 1   MISPTVEIEPKPRPPLADQTS------------RRSYAQVLSEGYP------------SD 60
           MI+P VE++ K RP    +TS            +RSYA+ ++EG P            SD
Sbjct: 179 MITPKVEVKAKTRPTFLPRTSPDCRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSD 238

Query: 61  SSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKA 120
           SS     S   SP+ +++E  NT++I RRFFH DW KI+  LRKQ E SF++ +FHA+KA
Sbjct: 239 SSHSSSNSFCDSPSSDLLE--NTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKA 298

Query: 121 IVTFKDPTQAALLCNNNEWSTLGRLILSSK--------LAMLVGAFWMWLRKQRLEQILW 180
           +V F     A LLC N  WST+G+  +  +           L+ ++  W   + +   LW
Sbjct: 299 LVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLW 358

Query: 181 --------------------KPESKLDTI------------ILASNISIKDDNGHPFVVQ 240
                               +  S  + I             L +N+ I D+ G+ F VQ
Sbjct: 359 NMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQ 418

Query: 241 TVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIK------- 300
            VTH   KWL ER+V++HG+F+R+ A  FDDFNP++EQ++F G+ A+ P+ +        
Sbjct: 419 VVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK 478

Query: 301 ---------LKSKIVINELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEIC 360
                    LKS I+  + + +  +    ++++D     +       ANK +      + 
Sbjct: 479 SSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSNLHAT-------ANKSK------LE 538

Query: 361 LLQSINED--MEGDSHSMQTKVGHVSSRNV--SKRKVSFPSPKEKTFIIILAVRPRGRQD 368
           +L  I+ D  ++     +  ++   S+ N+  SKRKVSF SP  KT I      P     
Sbjct: 539 ILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSP 598

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BSG07.6e-11999.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T0M91.3e-3832.77DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BLV79.5e-3729.38LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3E1T41.6e-3631.29DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3CTA32.3e-3533.43DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
KAA0045526.11.01e-15099.10hypothetical protein E6C27_scaffold243G00120 [Cucumis melo var. makuwa] >TYK0211... [more]
KAA0035766.11.42e-4333.89hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa][more]
TYK29852.15.25e-4333.51hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa][more]
KAA0038838.11.71e-4034.97hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK142... [more]
TYJ99315.11.86e-4028.98LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..361

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017283.1IVF0017283.1mRNA