Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCGTCAGTGATCAAATAGGTTCTACTCTTCTTCATCTGACTCAGAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACAGTAGGAAGTTTTTATGTCAGATTTGAAAAATGGTCATTCGAAAAACACGCGGCCCGAAGACTGGTTCCTAGCTACGGTGGATGGGTAAACTTTAGAGGCATTCCTCTTTCAGCTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA
mRNA sequence
ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACACTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA
Coding sequence (CDS)
ATGATCAGCCCTACAGTCGAAATAGAACCAAAGCCGAGGCCACCACTTGCAGACCAGACATCAAGAAGATCTTATGCACAAGTTCTATCAGAGGGATACCCAAGTGACTCATCATTAGATAGAGAAAGAAGTCTCTCTACAAGTCCAACAAGAGAGATAATCGAAGAAGACAACACTATCATCATAACAAGAAGGTTCTTCCATTATGACTGGCTAAAAATCATGAACACCTTGAGAAAACAGATGGAAACTTCTTTCTCTTTCTATTCGTTTCATGCAGACAAAGCCATTGTCACTTTCAAAGATCCAACACAAGCTGCCCTTCTATGCAACAACAATGAATGGTCCACACTTGGAAGACTGATACTTTCATCCAAATTGGCAATGCTTGTGGGGGCTTTTTGGATGTGGCTAAGGAAACAAAGACTAGAACAAATCTTGTGGAAGCCAGAATCAAAATTAGATACAATTATTCTGGCTTCAAATATAAGCATCAAAGACGACAACGGACACCCCTTCGTTGTTCAAACTGTTACTCATGAAAATAAAAAGTGGCTTACTGAAAGAGATGTAAAAATCCATGGTTCTTTCCAAAGAAAAGTTGCAATTGACTTTGATGATTTCAATCCTAAAGCGGAACAGTACTATTTCATCGGAAACACAGCAGTTCCACCGGAAAAAATCAAACTGAAAAGCAAGATAGTAATAAATGAGTTGTCACACTCAAGTGAAAATCTCACAATGGCCAAGATTATTGATGACAAAGGATCTAAAGGATCTAAAGATTCGGATGGGGAGATGGCAAACAAGAAAGAGAAAAGAAAAGGCAAAGAGATATGCTTATTACAGAGCATTAATGAAGATATGGAAGGGGATTCTCATTCAATGCAAACAAAAGTGGGCCACGTCAGCTCAAGGAATGTTTCAAAAAGGAAAGTTAGTTTTCCTTCTCCAAAAGAAAAAACTTTTATTATAATCCTTGCAGTGCGTCCACGAGGAAGACAAGACACGTCATTAATGAGGAAAGCTAAAAAAAGAGCAACCCAAGAAAGAAACACACATCAGAGAGAAAATCTCAGCAAAAAACCTACAGAATCAAATCAATATCCAATGCAGATCTCGATATCATTCCCATACAAATGGTGGTCGAAGGAGAAAAAGACAGAGATTGTAATCTATCCGTTGATCTTGGCTATATTTCCCCAGGAGAAATTCAAATAA
Protein sequence
MISPTVEIEPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQRLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGHVSSRNVSKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQERNTHQRENLSKKPTESNQYPMQISISFPYKWWSKEKKTEIVIYPLILAIFPQEKFK
Homology
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match:
A0A5D3BSG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G001040 PE=4 SV=1)
HSP 1 Score: 437.2 bits (1123), Expect = 7.6e-119
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0
Query: 82 METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 141
METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ
Sbjct: 1 METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 60
Query: 142 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 201
RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV
Sbjct: 61 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 120
Query: 202 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 261
AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK
Sbjct: 121 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 180
Query: 262 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGH 303
DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTK H
Sbjct: 181 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKCVH 221
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match:
A0A5A7T0M9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00440 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 1.3e-38
Identity = 117/357 (32.77%), Postives = 180/357 (50.42%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPLA---------------DQTSRRSYAQVLSEGYPSDSS----LDR 60
M++P V+ EPK RPPL +SR+S A+V+SEGY SDS+
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 ERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFK 120
+RS+ T P +N ++ITRR FH DW IMN+L+KQ +TSF++ FHA+KA++ F
Sbjct: 128 QRSVKTLPL------ENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFS 187
Query: 121 DPTQAALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW----- 180
+ A LC+N W+T+ + + + L+ ++ W+ + + W
Sbjct: 188 EHQNAKSLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTF 247
Query: 181 --------------KPESKLDTII-------------LASNISIKDDNGHPFVVQTVTHE 240
K +D +I + + I IKD + H FVV TVT
Sbjct: 248 LQIGNSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTIC 307
Query: 241 NKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELS 298
+ KWL +RDVKIHGSF+R+VAI+FD FN KAEQ+ F G+ A+ P K K+ ++ +++ EL+
Sbjct: 308 SGKWLAKRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELT 367
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match:
A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 9.5e-37
Identity = 129/439 (29.38%), Postives = 209/439 (47.61%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPLADQTS------------RRSYAQVLSEGYP------------SD 60
MI+P VE++ K RP +TS +RSYA+ ++EG P SD
Sbjct: 179 MITPKVEVKAKTRPTFLPRTSPDCRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSD 238
Query: 61 SSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKA 120
SS S SP+ +++E NT++I RRFFH DW KI+ LRKQ E SF++ +FHA+KA
Sbjct: 239 SSHSSSNSFCDSPSSDLLE--NTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKA 298
Query: 121 IVTFKDPTQAALLCNNNEWSTLGRLILSSK--------LAMLVGAFWMWLRKQRLEQILW 180
+V F A LLC N WST+G+ + + L+ ++ W + + LW
Sbjct: 299 LVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLW 358
Query: 181 --------------------KPESKLDTI------------ILASNISIKDDNGHPFVVQ 240
+ S + I L +N+ I D+ G+ F VQ
Sbjct: 359 NMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQ 418
Query: 241 TVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVI 300
VTH KWL ER+V++HG+F+R+ A FDDFNP++EQ++F G+ A+ P+ + S
Sbjct: 419 VVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK 478
Query: 301 NELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKE---KRKGKEICLLQSINED--MEG 360
+ L I D+ + + E+ N ++ +L I+ D ++
Sbjct: 479 SSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSNLHATANKSKLEILSGISNDGVLDK 538
Query: 361 DSHSMQTKVGHVSSRNV--SKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQ 369
+ ++ S+ N+ SKRKVSF SP KT I P + + K++ ++
Sbjct: 539 GKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSR 598
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match:
A0A5D3E1T4 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00930 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 133/425 (31.29%), Postives = 202/425 (47.53%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPLA---------------DQTSRRSYAQVLSEGYPSDSSLDRERSL 60
M++P V+ EPK RPPL +SR+S A+V+SEGY SDS+ E
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 STSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQ 120
S R +E N ++I RR FH DW IMN+ +KQ ETSF++ FHA+KA++ F +
Sbjct: 128 QISVKRLPLE--NAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQN 187
Query: 121 AALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW--------- 180
A LC+N W+T+ + + + L+ ++ W+ + + W
Sbjct: 188 AKSLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIG 247
Query: 181 ----------KPESKLDTII-------------LASNISIKDDNGHPFVVQTVTHENKKW 240
K +D +I + + I IKD +GH FVV TVT + KW
Sbjct: 248 NSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKW 307
Query: 241 LTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELSHSSE 300
L ERDVKIHGSF+R+VAI+FD FN KAEQ+ F + A+ P K K+ ++ +++ EL++ +
Sbjct: 308 LAERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEED 367
Query: 301 NLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQ--TKVGH 360
KI D K SK + + E+ K + S +E+ HS + +
Sbjct: 368 PTITKKIYDGDLPKSSK-KNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADN 427
Query: 361 VSSRNVSKRKVSFPSPKEKTFIIILAVRPRGRQDTSLMRKAKKRATQERNTHQRE--NLS 366
S R+ KRK + + + + QD++ KK TQ N+ E +
Sbjct: 428 ESLRSGGKRKEEYITDSSTDVV-------KETQDST----TKKVTTQNNNSTDFEGRGVQ 478
BLAST of IVF0017283 vs. ExPASy TrEMBL
Match:
A0A5D3CTA3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00580 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 2.3e-35
Identity = 115/344 (33.43%), Postives = 173/344 (50.29%), Query Frame = 0
Query: 9 EPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPT-REIIEEDNTIIITRRFF 68
+P PP D +RSYA+ + EG SDSS S + SP + + DN +++ RRFF
Sbjct: 7 DPHYSPPSIDY-HKRSYAKAIYEGSSSDSSYS---SSTNSPVHKSPLSLDNEVVLVRRFF 66
Query: 69 HYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGR------- 128
H +W KI+ L+KQ E F++ FH++KA+V FK+P A LLC N WS +G+
Sbjct: 67 HDNWQKIIRNLKKQTEKEFTYIPFHSEKALVNFKEPIPANLLCQNRGWSMVGKYFVKFEK 126
Query: 129 ----LILSSKLAMLVGAF----------WMWLRKQRLEQILW-----KPESKLDTII--- 188
L S KL G + W Q++E++ W E+K D+ +
Sbjct: 127 WSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVDETKEDSNLIEA 186
Query: 189 -----------LASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDD 248
L +NI I D+ G+ F++Q VTH ++KWLTERDV +HG+F+R+ A FD+
Sbjct: 187 KIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTFKRQAATTFDE 246
Query: 249 FNPKAEQYYFIGNTAVPPEKI--------KLKSKIVINELSHSSENLTMAKIIDDKGSKG 304
F P +EQ++F GN A+ E + KLK KIV L II+DK +
Sbjct: 247 FKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVA---------LKFIIIINDKEATS 306
BLAST of IVF0017283 vs. NCBI nr
Match:
KAA0045526.1 (hypothetical protein E6C27_scaffold243G00120 [Cucumis melo var. makuwa] >TYK02115.1 hypothetical protein E5676_scaffold680G001040 [Cucumis melo var. makuwa])
HSP 1 Score: 436 bits (1120), Expect = 1.01e-150
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0
Query: 82 METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 141
METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ
Sbjct: 1 METSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLILSSKLAMLVGAFWMWLRKQ 60
Query: 142 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 201
RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV
Sbjct: 61 RLEQILWKPESKLDTIILASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKV 120
Query: 202 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 261
AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK
Sbjct: 121 AIDFDDFNPKAEQYYFIGNTAVPPEKIKLKSKIVINELSHSSENLTMAKIIDDKGSKGSK 180
Query: 262 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKVGH 302
DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTK H
Sbjct: 181 DSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQTKCVH 221
BLAST of IVF0017283 vs. NCBI nr
Match:
KAA0035766.1 (hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 170 bits (431), Expect = 1.42e-43
Identity = 121/357 (33.89%), Postives = 182/357 (50.98%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPL------------ADQ---TSRRSYAQVLSEGYPSDSSLDRE--- 60
M++P V+ EPK RPPL AD +SR+S A+V+SEGY SDS+ E
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 -RSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFK 120
RS+ T P +N ++ITRR FH DW IMN+L+KQ +TSF++ FHA+KA++ F
Sbjct: 128 QRSVKTLPL------ENAVVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFS 187
Query: 121 DPTQAALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW----- 180
+ A LC+N W+T+ + + + L+ ++ W+ + + W
Sbjct: 188 EHQNAKSLCSNTRWTTISKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTF 247
Query: 181 --------------KPESKLDTIILA-------------SNISIKDDNGHPFVVQTVTHE 240
K +D +I A + I IKD + H FVV TVT
Sbjct: 248 LQIGNSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTVTIC 307
Query: 241 NKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELS 297
+ KWL +RDVKIHGSF+R+VAI+FD FN KAEQ+ F G+ A+ P K K+ ++ +++ EL+
Sbjct: 308 SGKWLAKRDVKIHGSFKRQVAIEFDKFNSKAEQFNFTGDLAISPGKFKITRNMVLMTELT 367
BLAST of IVF0017283 vs. NCBI nr
Match:
TYK29852.1 (hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa])
HSP 1 Score: 169 bits (427), Expect = 5.25e-43
Identity = 125/373 (33.51%), Postives = 186/373 (49.87%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPL------------ADQ---TSRRSYAQVLSEGYPSDSSLDRERSL 60
M++P V+ EPK RPPL AD +SR+S A+V+SEGY SDS+ E
Sbjct: 68 MVNPNVKTEPKARPPLEHFYKKGKSIASADSDSDSSRKSCARVVSEGYSSDSTSCSESKN 127
Query: 61 STSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQ 120
S R +E N ++I RR FH DW IMN+ +KQ ETSF++ FHA+KA++ F +
Sbjct: 128 QISVKRLPLE--NAVVIRRRLFHDDWKVIMNSHKKQTETSFTYNPFHAEKALIIFSEHQN 187
Query: 121 AALLCNNNEWSTLGRLILSSKL--------AMLVGAFWMWLRKQRLEQILW--------- 180
A LC+N W+T+ + + + L+ ++ W+ + + W
Sbjct: 188 AKSLCSNTRWTTIIKFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIG 247
Query: 181 ----------KPESKLDTIILA-------------SNISIKDDNGHPFVVQTVTHENKKW 240
K +D +I A + I IKD +GH FVV TVT + KW
Sbjct: 248 NSSEGLLEVEKATMNMDNLIEAKIKVRYNYSGFILATIRIKDKDGHFFVVHTVTICSGKW 307
Query: 241 LTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIKL-KSKIVINELSHSSE 300
L ERDVKIHGSF+R+VAI+FD FN KAEQ+ F + A+ P K K+ ++ +++ EL++ +
Sbjct: 308 LAERDVKIHGSFKRQVAIEFDKFNSKAEQFNFTRDLAISPGKFKITRNMVLMTELTNEED 367
Query: 301 NLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEICLLQSINEDMEGDSHSMQ--TKVGH 315
KI D K SK + + E+ K + S +E+ HS + +
Sbjct: 368 PTITKKIYDGDLPKSSK-KNSKRLKLVERWMEKRAVITSSNDEESFNHEHSFEGINVADN 427
BLAST of IVF0017283 vs. NCBI nr
Match:
KAA0038838.1 (hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK14264.1 hypothetical protein E5676_scaffold1121G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 159 bits (401), Expect = 1.71e-40
Identity = 107/306 (34.97%), Postives = 160/306 (52.29%), Query Frame = 0
Query: 9 EPKPRPPLADQTSRRSYAQVLSEGYPSDSSLDRERSLSTSPTREI-IEEDNTIIITRRFF 68
+P PP D +RSYA+ + EG SDSS S + SP + + DN +++ RRFF
Sbjct: 7 DPHYSPPSIDY-HKRSYAKAIYEGSSSDSSYS---SSTNSPVHKSPLSLDNEVVLVRRFF 66
Query: 69 HYDWLKIMNTLRKQMETSFSFYSFHADKAIVTFKDPTQAALLCNNNEWSTLGRLIL---- 128
H +W KI+ L+KQ E F++ FH++KA+V FK+P A LLC N WS +G+ +
Sbjct: 67 HDNWQKIIRNLKKQTEKEFTYIPFHSEKALVNFKEPIPANLLCQNRGWSMVGKYFVKFEK 126
Query: 129 -------SSKLAMLVGAF----------WMWLRKQRLEQILWK-----PESKLDTII--- 188
S KL G + W Q++E++ W E+K D+ +
Sbjct: 127 WSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVDETKEDSNLIEA 186
Query: 189 -----------LASNISIKDDNGHPFVVQTVTHENKKWLTERDVKIHGSFQRKVAIDFDD 248
L +NI I D+ G+ F++Q VTH ++KWLTERDV +HG+F+R+ A FD+
Sbjct: 187 KIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTFKRQAATTFDE 246
Query: 249 FNPKAEQYYFIGNTAVPPE------------KIK---LKSKIVIN--ELSHSSENLTMAK 256
F P +EQ++F GN A+ E KIK LK I+IN E + S E+ +K
Sbjct: 247 FKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEATSSKEDKLKSK 306
BLAST of IVF0017283 vs. NCBI nr
Match:
TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 165 bits (418), Expect = 1.86e-40
Identity = 131/452 (28.98%), Postives = 216/452 (47.79%), Query Frame = 0
Query: 1 MISPTVEIEPKPRPPLADQTS------------RRSYAQVLSEGYP------------SD 60
MI+P VE++ K RP +TS +RSYA+ ++EG P SD
Sbjct: 179 MITPKVEVKAKTRPTFLPRTSPDCRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSD 238
Query: 61 SSLDRERSLSTSPTREIIEEDNTIIITRRFFHYDWLKIMNTLRKQMETSFSFYSFHADKA 120
SS S SP+ +++E NT++I RRFFH DW KI+ LRKQ E SF++ +FHA+KA
Sbjct: 239 SSHSSSNSFCDSPSSDLLE--NTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKA 298
Query: 121 IVTFKDPTQAALLCNNNEWSTLGRLILSSK--------LAMLVGAFWMWLRKQRLEQILW 180
+V F A LLC N WST+G+ + + L+ ++ W + + LW
Sbjct: 299 LVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLW 358
Query: 181 --------------------KPESKLDTI------------ILASNISIKDDNGHPFVVQ 240
+ S + I L +N+ I D+ G+ F VQ
Sbjct: 359 NMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQ 418
Query: 241 TVTHENKKWLTERDVKIHGSFQRKVAIDFDDFNPKAEQYYFIGNTAVPPEKIK------- 300
VTH KWL ER+V++HG+F+R+ A FDDFNP++EQ++F G+ A+ P+ +
Sbjct: 419 VVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK 478
Query: 301 ---------LKSKIVINELSHSSENLTMAKIIDDKGSKGSKDSDGEMANKKEKRKGKEIC 360
LKS I+ + + + + ++++D + ANK + +
Sbjct: 479 SSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSNLHAT-------ANKSK------LE 538
Query: 361 LLQSINED--MEGDSHSMQTKVGHVSSRNV--SKRKVSFPSPKEKTFIIILAVRPRGRQD 368
+L I+ D ++ + ++ S+ N+ SKRKVSF SP KT I P
Sbjct: 539 ILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIFNPDSAPANHSP 598
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BSG0 | 7.6e-119 | 99.10 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T0M9 | 1.3e-38 | 32.77 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BLV7 | 9.5e-37 | 29.38 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3E1T4 | 1.6e-36 | 31.29 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3CTA3 | 2.3e-35 | 33.43 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
KAA0045526.1 | 1.01e-150 | 99.10 | hypothetical protein E6C27_scaffold243G00120 [Cucumis melo var. makuwa] >TYK0211... | [more] |
KAA0035766.1 | 1.42e-43 | 33.89 | hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa] | [more] |
TYK29852.1 | 5.25e-43 | 33.51 | hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa] | [more] |
KAA0038838.1 | 1.71e-40 | 34.97 | hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK142... | [more] |
TYJ99315.1 | 1.86e-40 | 28.98 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |