
IVF0017179 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACGAGGAGTTCCCATCAATGTATAGCCAGGGGATTGATATGTCCTAGGAAGATGTACGCACATCACGACCTGCGTCTGAGGGTAGGGCCGGATCAAGTGGATCGAAAAGGAAGAGAGGAAGCCAGCGAGAGGTCGAGCTTGATGTCATACATATGGCGCTGGAGTGTATGAACGACGAACTTAGGACGATTGTGGAGTGGCCTGCATGTGCCCTTGTCAATGACAACCATGTGCGACAGGAATTCTTTCACATATTGCATGAGATGACGGAACTAACGAGTTTGGATAGGACGTTGTTGCAAAGGCACCTTTTGTCTCATATGGACGACATGCGGGGTTTCGTACTGATGCCTAAGGATGAGAGGAAGGGCTTTTGTAGAGTCATCGTACGAGACGTCTCCAAATAG ATGGGAACGAGGAGTTCCCATCAATGTATAGCCAGGGGATTGATATGTCCTAGGAAGATGTACGCACATCACGACCTGCGTCTGAGGGTAGGGCCGGATCAACGAGAGGTCGAGCTTGATGTCATACATATGGCGCTGGAGTGTATGAACGACGAACTTAGGACGATTGTGGAGTGGCCTGCATGTGCCCTTGTCAATGACAACCATGTGCGACAGGAATTCTTTCACATATTGCATGAGATGACGGAACTAACGAGTTTGGATAGGACGTTGTTGCAAAGGCACCTTTTGTCTCATATGGACGACATGCGGGGTTTCGTACTGATGCCTAAGGATGAGAGGAAGGGCTTTTGTAGAGTCATCGTACGAGACGTCTCCAAATAG ATGGGAACGAGGAGTTCCCATCAATGTATAGCCAGGGGATTGATATGTCCTAGGAAGATGTACGCACATCACGACCTGCGTCTGAGGGTAGGGCCGGATCAACGAGAGGTCGAGCTTGATGTCATACATATGGCGCTGGAGTGTATGAACGACGAACTTAGGACGATTGTGGAGTGGCCTGCATGTGCCCTTGTCAATGACAACCATGTGCGACAGGAATTCTTTCACATATTGCATGAGATGACGGAACTAACGAGTTTGGATAGGACGTTGTTGCAAAGGCACCTTTTGTCTCATATGGACGACATGCGGGGTTTCGTACTGATGCCTAAGGATGAGAGGAAGGGCTTTTGTAGAGTCATCGTACGAGACGTCTCCAAATAG MGTRSSHQCIARGLICPRKMYAHHDLRLRVGPDQREVELDVIHMALECMNDELRTIVEWPACALVNDNHVRQEFFHILHEMTELTSLDRTLLQRHLLSHMDDMRGFVLMPKDERKGFCRVIVRDVSK Homology
BLAST of IVF0017179 vs. ExPASy TrEMBL
Match: A0A5D3CVN5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00800 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0017179 vs. ExPASy TrEMBL
Match: A0A5D3C1X3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003370 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37 Identity = 75/95 (78.95%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of IVF0017179 vs. ExPASy TrEMBL
Match: A0A5A7VI32 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold32G00060 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37 Identity = 75/95 (78.95%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of IVF0017179 vs. ExPASy TrEMBL
Match: A0A5D3BV29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00950 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34 Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of IVF0017179 vs. ExPASy TrEMBL
Match: A0A5A7V026 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00100 PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.5e-33 Identity = 70/94 (74.47%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of IVF0017179 vs. NCBI nr
Match: KAA0049603.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15961.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 196 bits (499), Expect = 3.01e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0017179 vs. NCBI nr
Match: TYK05827.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (422), Expect = 3.71e-49 Identity = 77/103 (74.76%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of IVF0017179 vs. NCBI nr
Match: KAA0066016.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (421), Expect = 5.90e-49 Identity = 75/95 (78.95%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of IVF0017179 vs. NCBI nr
Match: KAA0050378.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK03591.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 156 bits (395), Expect = 1.02e-46 Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of IVF0017179 vs. NCBI nr
Match: TYK29656.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (371), Expect = 2.35e-42 Identity = 67/94 (71.28%), Postives = 82/94 (87.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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