IVF0017134 (gene) Melon (IVF77) v1

Overview
NameIVF0017134
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Locationchr08: 9166533 .. 9167092 (+)
RNA-Seq ExpressionIVF0017134
SyntenyIVF0017134
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGGTAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGGTTAAGGTATTAATTTCATAATGCAATTATACATATTTTTTATAATCACAATCATCAACTAATCTCCCTAAATTACATTTGTACAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

mRNA sequence

ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGGTAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

Coding sequence (CDS)

ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGGTAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAATCATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAATGACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA

Protein sequence

MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
Homology
[Close]
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.4e-82
Identity = 148/159 (93.08%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW
Sbjct: 52  MAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 111

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           +KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSHD
Sbjct: 112 IKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHD 171

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           EDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 172 EDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.4e-82
Identity = 148/159 (93.08%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW
Sbjct: 52  MAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 111

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           +KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSHD
Sbjct: 112 IKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHD 171

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           EDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 172 EDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 28  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 87
           H   EMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 88  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 144
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           M +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCIIAERDLFD+W
Sbjct: 223 MVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDNW 282

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           VKSHP  +GLLHKSFPYYDDLSYVF KDRAT AR ETF DVGSNV NMFND +PLGDS+D
Sbjct: 283 VKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYD 342

Query: 121 EDIPTMYSQGVHISPD 137
           +DIP MYSQGVHISPD
Sbjct: 343 QDIPAMYSQGVHISPD 358

[Close]
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match: A0A5A7V6Q9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00200 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 101/159 (63.52%), Postives = 128/159 (80.50%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MA+KLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+AE++LFD+W
Sbjct: 52  MAKKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           V+SHPA KGLL+KSFPYYD+L+YVFG+DRATG  +ETF DVGSN P    D   +GD  +
Sbjct: 112 VRSHPAAKGLLNKSFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG-N 171

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 160
           ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 172 EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]
BLAST of IVF0017134 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 8.57e-104
Identity = 148/159 (93.08%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW
Sbjct: 52  MAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 111

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           +KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +VGSNV NMFNDTIPLGDSHD
Sbjct: 112 IKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHD 171

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 159
           EDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Sbjct: 172 EDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRK 210

[Close]
BLAST of IVF0017134 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (619), Expect = 1.64e-74
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 28  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 87
           H   EMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK
Sbjct: 361 HFNLEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGK 420

Query: 88  DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 143
           DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA
Sbjct: 421 DRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRA 476

[Close]
BLAST of IVF0017134 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (570), Expect = 1.91e-69
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           M +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCIIAERDLFD+W
Sbjct: 223 MVKKLSDTNIQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDNW 282

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           VKSHP  +GLLHKSFPYYDDLSYVF KDRAT AR ETF DVGSNV NMFND +PLGDS+D
Sbjct: 283 VKSHPTAEGLLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYD 342

Query: 121 EDIPTMYSQGVHISPD 136
           +DIP MYSQGVHISPD
Sbjct: 343 QDIPAMYSQGVHISPD 358

[Close]
BLAST of IVF0017134 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (540), Expect = 3.17e-66
Identity = 101/159 (63.52%), Postives = 127/159 (79.87%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MAEKLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+AE++LFD+W
Sbjct: 2   MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 61

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           V+SHPA KGLL+K FPYYD+L+YVFG+DRATG  +ETF DVGSN P    D   +GD + 
Sbjct: 62  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN- 121

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 159
           ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 122 EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 159

[Close]
BLAST of IVF0017134 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 1.02e-65
Identity = 102/159 (64.15%), Postives = 127/159 (79.87%), Query Frame = 0 

Query: 1   MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW 60
           MAEKLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CIIAE++LFD+W
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNW 111

Query: 61  VKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHD 120
           V+SHPA KGLL+K FPYYD+L+YVFG+DRATG  +ETF DVGSN P    D   +GD + 
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGN- 171

Query: 121 EDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK 159
           ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Sbjct: 172 EDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

[Close]
BLAST of IVF0017134 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-08
Identity = 33/125 (26.40%), Postives = 60/125 (48.00%), Query Frame = 0 

Query: 19  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYY 78
           R+K LK  Y +  +++  S SGFGW+   +   A  +++  ++K+HP  K L + +F ++
Sbjct: 73  RMKYLKIQYQSCLDLQRFS-SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFF 132

Query: 79  DDLSYVFGKDRATGARSETFVD--------VGSNVPNMFNDTIPLGDSHDEDIPTMYSQG 136
           D+L  +FG+  ATG  +    D         G N    + D     + ++ D  T +   
Sbjct: 133 DELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVD--DFDNVYEYDTTTHHESS 192

[Close]
BLAST of IVF0017134 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 22/78 (28.21%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 15  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKS 74
           V+  R K L++ Y+ I  +     +GF W+     +IA+ D++++++++HP  +    K+
Sbjct: 377 VLKNRYKHLRRLYNDIKFLL--EQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKT 436

Query: 75  FPYYDDLSYVFGKDRATG 93
            P Y +L ++FGK+ + G
Sbjct: 437 IPSYPNLCFIFGKETSDG 452

[Close]
BLAST of IVF0017134 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 23/90 (25.56%), Postives = 47/90 (52.22%), Query Frame = 0 

Query: 15  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKS 74
           V+  R K+L+  + ++  +      GF W++  Q ++A+  ++D ++K HP ++    KS
Sbjct: 65  VLKNRHKTLRNLFKSVNNLLIE--DGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKS 124

Query: 75  FPYYDDLSYVFGKDRATGARSETFVDVGSN 105
            P Y DL  V+  D  +  ++E  +  G +
Sbjct: 125 IPCYKDLCLVY-SDGMSEHKAEESISEGES 151

[Close]
BLAST of IVF0017134 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 23/90 (25.56%), Postives = 47/90 (52.22%), Query Frame = 0 

Query: 15  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKS 74
           V+  R K+L+  + ++  +      GF W++  Q ++A+  ++D ++K HP ++    KS
Sbjct: 65  VLKNRHKTLRNLFKSVNNLLIE--DGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKS 124

Query: 75  FPYYDDLSYVFGKDRATGARSETFVDVGSN 105
            P Y DL  V+  D  +  ++E  +  G +
Sbjct: 125 IPCYKDLCLVY-SDGMSEHKAEESISEGES 151

[Close]
BLAST of IVF0017134 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 0 

Query: 40  GFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVF 86
           GF W+E    I A+  ++DS++K HP  +    KS P Y+DL  +F
Sbjct: 245 GFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIF 290

The following BLAST results are available for this feature:
BLAST of IVF0017134 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0017134 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U0H76.4e-8293.08Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L36.4e-8293.08uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5D3DG221.3e-6197.41Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TJS22.7e-5677.94Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V6Q91.1e-5263.52Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0017134 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441954.18.57e-10493.08PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret... [more]
KAA0062747.11.64e-7497.41retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p... [more]
KAA0043564.11.91e-6977.94retrotransposon protein [Cucumis melo var. makuwa][more]
TYK10915.13.17e-6663.52retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p... [more]
KAA0066208.11.02e-6564.15retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of IVF0017134 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27260.14.7e-0826.40unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.22.3e-0728.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02210.12.8e-0525.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.22.8e-0525.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24960.11.4e-0439.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 1..108
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017134.1IVF0017134.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding