IVF0017071 (gene) Melon (IVF77) v1

Overview


Name	IVF0017071
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	BHLH transcription factor
Location	chr09: 21557564 .. 21559035 (+)
RNA-Seq Expression	IVF0017071
Synteny	IVF0017071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCTCTCATTAAGGGTCTCAAAAAAATGGAATTCTTCAATGTTGAGTCCCCCTTTTCTTTTGACTTGGGAGAAGACTAGTCCCTCTGCCCTCTCTTCCATCGCCCTCCGTCATCTCTCCGCCATTGGACAACGACGGTAACCGTGTTTCCCAAAAGCCAAAAAATGGCCGCCGGAAAAAGCCACTGCCCAACACTTGCAATGATGATGGCGGCGATGAGAATCTTGACGAACAAAAGAAGAAGAAGATAATACATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTACACCACACTTCGCTCGCTTCTCCCTCTTGACTACCTCAAGGTACGAATAATTTCATTGATTCACTTGTTGACCTCCACAACAGAAATATCGATACCTTAATTTCGATAAAAAAAAAAAAAAAAATTATAACGAGGACCTGAATGCTATAATAAGGTTAAAGTTAATGTAATTGGCCGTTGATAAAAGTAAAGTGGTTCTTTAATTTTCTCAAAATTTCTCACCCTCTAATGTGAAAAATAAATCATCAAGCTTTTTTTCTTTAAATAAACTTCAGTATCAAGAAGTATATATTAATTAATCTATGAACTTTAAATGGTATACAATAGTTTTATAGAAAATTAAACTTATATGTTTGTATCCTTTCTTCAGAAAATTACACATTTTTTTTCTCTTTTTTTCAGTTCAATAGCACATAAATCGAACATGTTACCGGAACTTTAGAGAGACTTGTAATTATCAAAGTAAGTTAGGTTAAATGGTACATTCATTGACCTCTGTCCAATCCGTCAATCGTAATACAAATTTGTAAATACAAAATATTAATTACGACAGTATAACCAATCTGGTTTCTAATTGATATTAAAGTCTATACTCCAAAAGGATAGATCTAAATTTTACTATATTTGTAACTTAAAAAGAAAAAACAAACGAAAAAAAATACTAACCTACTTTTAGTTTTTTTATGACATACATCCATCTTCTTCCACAAATTTAACACCACCATTGTTTACGATTGCATTCATAGGGAAAACGGTCAATATCAGACCACATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGGTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAG

mRNA sequence

CTTTCTCTCTCATTAAGGGTCTCAAAAAAATGGAATTCTTCAATGTTGAGTCCCCCTTTTCTTTTGACTTGGGAGAAGACTAGTCCCTCTGCCCTCTCTTCCATCGCCCTCCGTCATCTCTCCGCCATTGGACAACGACGGTAACCGTGTTTCCCAAAAGCCAAAAAATGGCCGCCGGAAAAAGCCACTGCCCAACACTTGCAATGATGATGGCGGCGATGAGAATCTTGACGAACAAAAGAAGAAGAAGATAATACATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTACACCACACTTCGCTCGCTTCTCCCTCTTGACTACCTCAAGGGAAAACGGTCAATATCAGACCACATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGGTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAG

Coding sequence (CDS)

ATGTCTTCTCTTTACACCACACTTCGCTCGCTTCTCCCTCTTGACTACCTCAAGGGAAAACGGTCAATATCAGACCACATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGGTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAG

Protein sequence

MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNRKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD

Homology

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BLAST of IVF0017071 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 49/159 (30.82%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M++L+ TLR+ LPL Y+KGKR++SDH+   V++++  + RI++L  +RD++     Q  +
Sbjct: 58  MATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYK 117

Query: 61  KR---------LSSSERDSVVVRAK-DGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEIL 120
                      +  SE  +V+V+    G+ + V  +++    LPLS  ++ +  +GLE++
Sbjct: 118 SNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVM 177

Query: 121 NCISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKL 150
           +  + R+++R +HTI+ +  +N+ GC   ID+   Q KL
Sbjct: 178 SSFTTRVNDRLMHTIQVE--VNSFGC---IDLLWLQQKL 211

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BLAST of IVF0017071 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 0


Query: 2   SSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKV-RELANQTNR 61
           +SL+  LR LLP  Y+KGKRS +DH+ + V+Y++ +Q++I+++ +KRD++ R + + ++R
Sbjct: 91  TSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSR 150

Query: 62  -----KRLSSS------ERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEG-LE 121
                + L+SS      + +  VV     IG+++V+    +H   LS  +Q L  E    
Sbjct: 151 GEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFN 210

Query: 122 ILNCISHRLDERFIHTI 126
           I++CIS RL + FIHTI
Sbjct: 211 IVSCISTRLHQGFIHTI 227

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BLAST of IVF0017071 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 48/133 (36.09%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M+SLY +LRSLLPL++++GKRS SD ++  V+Y+ ++QR I+ +  KRD +  L+ ++ R
Sbjct: 17  MASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRDDLVLLSGRSFR 76

Query: 61  KRLSSSERD-----SVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISH 120
              SS+E++     + VV     +GI++VL      + P S  +Q L   GL +L  I  
Sbjct: 77  ---SSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVLREHGLYVLGYICS 136

Query: 121 RLDERFIHTIECQ 129
            +++R IHT++ +
Sbjct: 137 SVNDRLIHTLQAE 143

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BLAST of IVF0017071 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 54/158 (34.18%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKV-RELANQT- 60
           M+ L+ +LRS LPL Y+KGKR++SDH+   VS+++  Q RI+ L  +RD++ RE+ + T 
Sbjct: 42  MAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTS 101

Query: 61  -----NRKRLSSSERDSVVVRAKDGIGIQVVLDTTTK--HRLPLSIFVQALVVEGLEILN 120
                +    S SE  SV+V+     G +VV+ +        PLS  ++ L  +GLE+++
Sbjct: 102 LTGSGSGSGSSRSEPASVMVQPCVS-GFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVIS 161

Query: 121 CISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKL 150
            ++ R++ER ++TI+ +  +N+  C+   D++  Q KL
Sbjct: 162 SLTARVNERLMYTIQVE--VNSFDCF---DLAWLQQKL 193

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BLAST of IVF0017071 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 46/137 (33.58%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M+SLY +LRSLLPL ++KGKRS SD + + V+Y++++QR+I++L  +RD +  L+  +  
Sbjct: 17  MASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGSLL 76

Query: 61  KRLSSSERDSV--------VVRAKDGIGIQVVLDTTTKHRLP-LSIFVQALVVEGLEILN 120
              +   ++ V        VV  +  +G++++L +      P  S  +Q L   GL +LN
Sbjct: 77  GSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLN 136

Query: 121 CISHRLDERFIHTIECQ 129
            IS  +D+R ++TI+ +
Sbjct: 137 SISSIVDDRLVYTIQAE 153

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BLAST of IVF0017071 vs. ExPASy TrEMBL
Match: A0A1S4E655 (transcription factor bHLH126-like OS=Cucumis melo OX=3656 GN=LOC103482690 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 17  LKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNRKRLSSSERDSVVVRAK 76
           ++GKRSISDHMQQTVSYVQHIQRRIQQLKDKRDK+RELANQTNRKRLSSSERDSVVVRAK
Sbjct: 1   MEGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKLRELANQTNRKRLSSSERDSVVVRAK 60

Query: 77  DGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC 136
           DGIGIQVVLDTTTKHRLP SIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC
Sbjct: 61  DGIGIQVVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC 120

Query: 137 YTTIDVSMFQHKLANLEYYPLD 159
           YTTIDVSMFQHKLANLEYYPLD
Sbjct: 121 YTTIDVSMFQHKLANLEYYPLD 142

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BLAST of IVF0017071 vs. ExPASy TrEMBL
Match: A0A5A7TN30 (Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003200 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.9e-68
Identity = 138/163 (84.66%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQT-- 60
           MSSLYTTLRSLLPL+YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKRDK+RELANQT  
Sbjct: 88  MSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRDKLRELANQTMV 147

Query: 61  ---NRKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISH 120
                + L+SSERDSVVVRAKDGIGIQVVLDT TKHRLPLSIFVQALV EGLEILNCIS+
Sbjct: 148 IIGTTETLNSSERDSVVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISN 207

Query: 121 RLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 159
           RL+ERFIHTIECQ IL +DGCY TID SM QHKLANLEYYPLD
Sbjct: 208 RLNERFIHTIECQTILKDDGCYPTIDASMLQHKLANLEYYPLD 250

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BLAST of IVF0017071 vs. ExPASy TrEMBL
Match: A0A097IYN6 (BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 133/164 (81.10%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQT-- 60
           MSSLYTTLRSLLPL+YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKR  +RELA+QT  
Sbjct: 88  MSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTLRELASQTTV 147

Query: 61  ----NRKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCIS 120
                 + L+SSER S VVRAKDGIGIQVVLDT TK RLPLSIFVQALV EGLEILNCIS
Sbjct: 148 AIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSIFVQALVSEGLEILNCIS 207

Query: 121 HRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 159
           +RL+ERFIHTIECQP+LN+DGCY TIDVS+ QHKLANLEYYPLD
Sbjct: 208 NRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLEYYPLD 251

[Close]

BLAST of IVF0017071 vs. ExPASy TrEMBL
Match: A0A1S4E6V7 (transcription factor bHLH120-like OS=Cucumis melo OX=3656 GN=LOC107992377 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 16  YLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQT-----NRKRLSSSERDS 75
           YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKRDK+RELANQT       + L+SSERDS
Sbjct: 5   YLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDS 64

Query: 76  VVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHRLDERFIHTIECQPI 135
           VVVRAKDGIGIQVVLDT TKHRLPLSIFVQALV EGLEILNCIS+RL+ERFIHTIECQ I
Sbjct: 65  VVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTI 124

Query: 136 LNNDGCYTTIDVSMFQHKLANLEYYPLD 159
           L +DGCY TID SM QHKLANLEYYPLD
Sbjct: 125 LKDDGCYPTIDASMLQHKLANLEYYPLD 152

[Close]

BLAST of IVF0017071 vs. ExPASy TrEMBL
Match: A0A6J1E8G7 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.3e-46
Identity = 100/162 (61.73%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           MSSLY++LRSLLPL+YLKGK SISDHM +TV Y+Q++QRRI+QL DKRD+++ L+ +   
Sbjct: 90  MSSLYSSLRSLLPLEYLKGKPSISDHMHETVKYIQYMQRRIRQLSDKRDELKNLSGENMA 149

Query: 61  ----KRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHR 120
               + L+SS RDSVVVR+K+G+GIQVVLDTTT+HRLP+S  ++ L VEGLEIL+CI+ +
Sbjct: 150 VGMVETLNSSRRDSVVVRSKNGLGIQVVLDTTTQHRLPVSNILRVLAVEGLEILSCITIK 209

Query: 121 LDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 159
           ++ER++HTIECQ  + +DG Y +IDV   QHKL NLEY PLD
Sbjct: 210 VNERYLHTIECQ--VESDGFYPSIDVCELQHKLTNLEYLPLD 249

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BLAST of IVF0017071 vs. NCBI nr
Match: XP_016903726.1 (PREDICTED: transcription factor bHLH126-like [Cucumis melo])

HSP 1 Score: 270 bits (691), Expect = 7.52e-91
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 17  LKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNRKRLSSSERDSVVVRAK 76
           ++GKRSISDHMQQTVSYVQHIQRRIQQLKDKRDK+RELANQTNRKRLSSSERDSVVVRAK
Sbjct: 1   MEGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKLRELANQTNRKRLSSSERDSVVVRAK 60

Query: 77  DGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC 136
           DGIGIQVVLDTTTKHRLP SIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC
Sbjct: 61  DGIGIQVVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGC 120

Query: 137 YTTIDVSMFQHKLANLEYYPLD 158
           YTTIDVSMFQHKLANLEYYPLD
Sbjct: 121 YTTIDVSMFQHKLANLEYYPLD 142

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BLAST of IVF0017071 vs. NCBI nr
Match: KAA0042815.1 (transcription factor bHLH120-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (671), Expect = 3.21e-86
Identity = 138/163 (84.66%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQT-- 60
           MSSLYTTLRSLLPL+YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKRDK+RELANQT  
Sbjct: 88  MSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRDKLRELANQTMV 147

Query: 61  ---NRKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISH 120
                + L+SSERDSVVVRAKDGIGIQVVLDT TKHRLPLSIFVQALV EGLEILNCIS+
Sbjct: 148 IIGTTETLNSSERDSVVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISN 207

Query: 121 RLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 158
           RL+ERFIHTIECQ IL +DGCY TID SM QHKLANLEYYPLD
Sbjct: 208 RLNERFIHTIECQTILKDDGCYPTIDASMLQHKLANLEYYPLD 250

[Close]

BLAST of IVF0017071 vs. NCBI nr
Match: NP_001295816.1 (transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcription factor [Cucumis sativus] >KGN50162.1 hypothetical protein Csa_000184 [Cucumis sativus])

HSP 1 Score: 251 bits (642), Expect = 8.49e-82
Identity = 133/164 (81.10%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTN- 60
           MSSLYTTLRSLLPL+YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKR  +RELA+QT  
Sbjct: 88  MSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTLRELASQTTV 147

Query: 61  -----RKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCIS 120
                 + L+SSER S VVRAKDGIGIQVVLDT TK RLPLSIFVQALV EGLEILNCIS
Sbjct: 148 AIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSIFVQALVSEGLEILNCIS 207

Query: 121 HRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 158
           +RL+ERFIHTIECQP+LN+DGCY TIDVS+ QHKLANLEYYPLD
Sbjct: 208 NRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLEYYPLD 251

[Close]

BLAST of IVF0017071 vs. NCBI nr
Match: XP_016903725.1 (PREDICTED: transcription factor bHLH120-like [Cucumis melo])

HSP 1 Score: 237 bits (604), Expect = 1.92e-77
Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 16  YLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQT-----NRKRLSSSERDS 75
           YLKGKRSISDHMQ+TVSY+QH+QRRIQQLKDKRDK+RELANQT       + L+SSERDS
Sbjct: 5   YLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDS 64

Query: 76  VVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISHRLDERFIHTIECQPI 135
           VVVRAKDGIGIQVVLDT TKHRLPLSIFVQALV EGLEILNCIS+RL+ERFIHTIECQ I
Sbjct: 65  VVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTI 124

Query: 136 LNNDGCYTTIDVSMFQHKLANLEYYPLD 158
           L +DGCY TID SM QHKLANLEYYPLD
Sbjct: 125 LKDDGCYPTIDASMLQHKLANLEYYPLD 152

[Close]

BLAST of IVF0017071 vs. NCBI nr
Match: XP_038875626.1 (transcription factor bHLH118-like [Benincasa hispida])

HSP 1 Score: 230 bits (587), Expect = 1.75e-73
Identity = 120/163 (73.62%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           MSSLYTTLRSLLPL+YLKGKRSISDH+ +TV+Y+QH+Q RIQQL DKRD++R+L+N T  
Sbjct: 86  MSSLYTTLRSLLPLEYLKGKRSISDHIHETVNYIQHMQERIQQLSDKRDELRKLSNGTTA 145

Query: 61  -----KRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISH 120
                K L+SSERDSVVVR KDGIGIQVV+DT TKHR PLS F+QAL  EGLEIL+CIS+
Sbjct: 146 TVDTAKTLNSSERDSVVVRPKDGIGIQVVIDTATKHRFPLSNFLQALAAEGLEILSCISN 205

Query: 121 RLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD 158
           RL+ERFIHTIECQPILNNDG Y  IDV    HKL NLEY+PLD
Sbjct: 206 RLNERFIHTIECQPILNNDGVYPNIDVFELHHKLTNLEYFPLD 248

[Close]

BLAST of IVF0017071 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.7e-15
Identity = 49/159 (30.82%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M++L+ TLR+ LPL Y+KGKR++SDH+   V++++  + RI++L  +RD++     Q  +
Sbjct: 58  MATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYK 117

Query: 61  KR---------LSSSERDSVVVRAK-DGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEIL 120
                      +  SE  +V+V+    G+ + V  +++    LPLS  ++ +  +GLE++
Sbjct: 118 SNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVM 177

Query: 121 NCISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKL 150
           +  + R+++R +HTI+ +  +N+ GC   ID+   Q KL
Sbjct: 178 SSFTTRVNDRLMHTIQVE--VNSFGC---IDLLWLQQKL 211

[Close]

BLAST of IVF0017071 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-14
Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 0


Query: 2   SSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKV-RELANQTNR 61
           +SL+  LR LLP  Y+KGKRS +DH+ + V+Y++ +Q++I+++ +KRD++ R + + ++R
Sbjct: 91  TSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSR 150

Query: 62  -----KRLSSS------ERDSVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEG-LE 121
                + L+SS      + +  VV     IG+++V+    +H   LS  +Q L  E    
Sbjct: 151 GEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFN 210

Query: 122 ILNCISHRLDERFIHTI 126
           I++CIS RL + FIHTI
Sbjct: 211 IVSCISTRLHQGFIHTI 227

[Close]

BLAST of IVF0017071 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 48/133 (36.09%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M+SLY +LRSLLPL++++GKRS SD ++  V+Y+ ++QR I+ +  KRD +  L+ ++ R
Sbjct: 17  MASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRDDLVLLSGRSFR 76

Query: 61  KRLSSSERD-----SVVVRAKDGIGIQVVLDTTTKHRLPLSIFVQALVVEGLEILNCISH 120
              SS+E++     + VV     +GI++VL      + P S  +Q L   GL +L  I  
Sbjct: 77  ---SSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVLREHGLYVLGYICS 136

Query: 121 RLDERFIHTIECQ 129
            +++R IHT++ +
Sbjct: 137 SVNDRLIHTLQAE 143

[Close]

BLAST of IVF0017071 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 54/158 (34.18%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKV-RELANQT- 60
           M+ L+ +LRS LPL Y+KGKR++SDH+   VS+++  Q RI+ L  +RD++ RE+ + T 
Sbjct: 42  MAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTS 101

Query: 61  -----NRKRLSSSERDSVVVRAKDGIGIQVVLDTTTK--HRLPLSIFVQALVVEGLEILN 120
                +    S SE  SV+V+     G +VV+ +        PLS  ++ L  +GLE+++
Sbjct: 102 LTGSGSGSGSSRSEPASVMVQPCVS-GFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVIS 161

Query: 121 CISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKL 150
            ++ R++ER ++TI+ +  +N+  C+   D++  Q KL
Sbjct: 162 SLTARVNERLMYTIQVE--VNSFDCF---DLAWLQQKL 193

[Close]

BLAST of IVF0017071 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 46/137 (33.58%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 1   MSSLYTTLRSLLPLDYLKGKRSISDHMQQTVSYVQHIQRRIQQLKDKRDKVRELANQTNR 60
           M+SLY +LRSLLPL ++KGKRS SD + + V+Y++++QR+I++L  +RD +  L+  +  
Sbjct: 17  MASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMVLSRGSLL 76

Query: 61  KRLSSSERDSV--------VVRAKDGIGIQVVLDTTTKHRLP-LSIFVQALVVEGLEILN 120
              +   ++ V        VV  +  +G++++L +      P  S  +Q L   GL +LN
Sbjct: 77  GSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVLSEYGLCLLN 136

Query: 121 CISHRLDERFIHTIECQ 129
            IS  +D+R ++TI+ +
Sbjct: 137 SISSIVDDRLVYTIQAE 153

The following BLAST results are available for this feature:

BLAST of IVF0017071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	1.2e-13	30.82	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9LN95	1.4e-12	35.77	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]
Q9STJ7	2.3e-12	36.09	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9FLI0	2.3e-12	34.18	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9FLI1	1.5e-11	33.58	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]

BLAST of IVF0017071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E655	2.5e-70	97.18	transcription factor bHLH126-like OS=Cucumis melo OX=3656 GN=LOC103482690 PE=4 S...	[more]
A0A5A7TN30	6.9e-68	84.66	Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A097IYN6	1.6e-64	81.10	BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1	[more]
A0A1S4E6V7	3.1e-60	83.78	transcription factor bHLH120-like OS=Cucumis melo OX=3656 GN=LOC107992377 PE=4 S...	[more]
A0A6J1E8G7	4.3e-46	61.73	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 ...	[more]

BLAST of IVF0017071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903726.1	7.52e-91	97.18	PREDICTED: transcription factor bHLH126-like [Cucumis melo]	[more]
KAA0042815.1	3.21e-86	84.66	transcription factor bHLH120-like protein [Cucumis melo var. makuwa]	[more]
NP_001295816.1	8.49e-82	81.10	transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcripti...	[more]
XP_016903725.1	1.92e-77	83.78	PREDICTED: transcription factor bHLH120-like [Cucumis melo]	[more]
XP_038875626.1	1.75e-73	73.62	transcription factor bHLH118-like [Benincasa hispida]	[more]

BLAST of IVF0017071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25410.1	8.7e-15	30.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	9.6e-14	35.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	1.6e-13	36.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.6e-13	34.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	1.1e-12	33.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..61
None	No IPR available	PANTHER	PTHR13935:SF110	HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 1..152
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 1..152
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 1..37 score: 8.670174
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017071.2	IVF0017071.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity