IVF0016936 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACGTTCGATCAGGAAATTGTTGGTACGAGAGTAGAATTGCATAAATTGCCAGCAACTGAGGAAAATCTTGCACTGTTAGCCAAGAGTATCGAGCGGTTGGAAGTACAAGTGGAGATGCAACAACAATTGCTGATGATGTATGTAGAAGGAGTGATGAAAGGACGGCCGATCACGCTTGGAGGATCATCGAACAAAGGAAAATCAATCAAGAGCAATGTTGAAGGAGGAGAAACGTCGATGAATGAAATTAAATCAGGAGGAAGCAACTATTCTAATCAGAGTAGGTTTAAGAAGGTTGAGATGTCAGTTTTTAGCGGCATCGATTGGGACTCTTGGCTACTTAGAGCGGATTGCTATTTCTAGATACATTAGTTAACGGATTCGGAGAAGATGATTGTAGTTGTTACTAGTTTTGATGGAGCAATGCTAGGTTATTATCGATTGCAGGAGGAACAAGAATCTTTCAAAGTTTGGCTGGACTTGTAACAGAGGATGATGATTCGTTTCATATCGGTTAGAGAGGGATCAATCTATGGACGATTCTTAGCGATTATGCAGAAGACGGTCGTGGAGAAATATCATAGTCTATTTGATAAATTGGTTGTGCCATTACCATAACTACCGAAGAAGGTGCTGGAAGAAATGTTTATGAATGGGTGTAGTCCATGGATGTAGGCTAGGGTAGGATGTTGAGAGCTAGTTAGGCTTGCGCATCTGATGAAACTGGCTCAACACGTGGAGAACTTGGAGATAACGAGGAAGGAAGTGGGCCTGGG ATGGAAACGTTCGATCAGGAAATTGTTGGTACGAGAGTAGAATTGCATAAATTGCCAGCAACTGAGGAAAATCTTGCACTGTTAGCCAAGAGTATCGAGCGGTTGGAAGTACAAGTGGAGATGCAACAACAATTGCTGATGATGTATGTAGAAGGAGTGATGAAAGGACGGCCGATCACGCTTGGAGGATCATCGAACAAAGGAAAATCAATCAAGAGCAATGTTGAAGGAGGAGAAACGTCGATGAATGAAATTAAATCAGGAGGAAGCAACTATTCTAATCAGAGTAGGTTTAAGAAGGTTGAGATGTCAGTTTTTAGCGGCATCGATTGGGACTCTTGGCTACTTAGAGCGGATTGCTATTTCTAGATACATTAGTTAACGGATTCGGAGAAGATGATTGTAGTTGTTACTAGTTTTGATGGAGCAATGCTAGGTTATTATCGATTGCAGGAGGAACAAGAATCTTTCAAAGTTTGGCTGGACTTGTAACAGAGGATGATGATTCGTTTCATATCGGTTAGAGAGGGATCAATCTATGGACGATTCTTAGCGATTATGCAGAAGACGGTCGTGGAGAAATATCATAGTCTATTTGATAAATTGGTTGTGCCATTACCATAACTACCGAAGAAGGTGCTGGAAGAAATGTTTATGAATGGGTGTAGTCCATGGATGTAGGCTAGGGTAGGATGTTGAGAGCTAGTTAGGCTTGCGCATCTGATGAAACTGGCTCAACACGTGGAGAACTTGGAGATAACGAGGAAGGAAGTGGGCCTGGG ATGGAAACGTTCGATCAGGAAATTGTTGGTACGAGAGTAGAATTGCATAAATTGCCAGCAACTGAGGAAAATCTTGCACTGTTAGCCAAGAGTATCGAGCGGTTGGAAGTACAAGTGGAGATGCAACAACAATTGCTGATGATGTATGTAGAAGGAGTGATGAAAGGACGGCCGATCACGCTTGGAGGATCATCGAACAAAGGAAAATCAATCAAGAGCAATGTTGAAGGAGGAGAAACGTCGATGAATGAAATTAAATCAGGAGGAAGCAACTATTCTAATCAGAGTAGGTTTAAGAAGGTTGAGATGTCAGTTTTTAGCGGCATCGATTGGGACTCTTGGCTACTTAGAGCGGATTGCTATTTCTAG METFDQEIVGTRVELHKLPATEENLALLAKSIERLEVQVEMQQQLLMMYVEGVMKGRPITLGGSSNKGKSIKSNVEGGETSMNEIKSGGSNYSNQSRFKKVEMSVFSGIDWDSWLLRADCYF Homology
BLAST of IVF0016936 vs. ExPASy TrEMBL
Match: A0A5D3BNP7 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00620 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of IVF0016936 vs. ExPASy TrEMBL
Match: A0A5A7UUC3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00180 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.9e-17 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of IVF0016936 vs. ExPASy TrEMBL
Match: A0A5A7UKW4 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00900 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13 Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 0
BLAST of IVF0016936 vs. ExPASy TrEMBL
Match: A0A5A7SPQ8 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00710 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 8.3e-13 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of IVF0016936 vs. ExPASy TrEMBL
Match: A0A5A7V723 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00260 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12 Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 0
BLAST of IVF0016936 vs. NCBI nr
Match: KAA0052094.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK00708.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 236 bits (601), Expect = 4.71e-78 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of IVF0016936 vs. NCBI nr
Match: KAA0057101.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK20636.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 9.81e-23 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of IVF0016936 vs. NCBI nr
Match: KAA0055708.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 3.55e-16 Identity = 52/130 (40.00%), Postives = 83/130 (63.85%), Query Frame = 0
BLAST of IVF0016936 vs. NCBI nr
Match: KAA0061441.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK21519.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 79.7 bits (195), Expect = 7.60e-16 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 0
BLAST of IVF0016936 vs. NCBI nr
Match: KAA0031986.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK16806.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 8.96e-16 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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