IVF0016619 (gene) Melon (IVF77) v1

Overview


Name	IVF0016619
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	chr09: 17458483 .. 17460090 (+)
RNA-Seq Expression	IVF0016619
Synteny	IVF0016619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAAGTGGAAGCAGCCCGGGATCCCAAGTAGCCCTAGCAGATAACAAAACGACGTAGTTCCGATTGTCGGAATCCGAACGGCATCGTCACCGGAGGTAGGTTTCGATAACTTGCAGTGGAACAGTCTTCGGAAACTTTCATTTCTGTCCCATTCCAAAATCTCTTTTTACTTCTTCTCGAAACTACCGTCTGCCAAACTCAACGACCTTCGACCAAATCCCTCTAACCACCCATAAACCCATTTCTCTCTTTCTTCCTCCGTCGCCATACCCATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCCATTCCATTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCAATGTCTACGCAACTACGCCAAAGCTGCGATTCTCATCGGTGCTGCAGCGACCATGGTTGGGAAATTCTCGAATTTGCCTGCCAGAGCTGAGACGCCTGCGGTGGTGGCTGAGGAAGCTTCAAGAATGGAGGAAACCTCCCCAGATAAGCGGATTGTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAACTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTGAAAATTTTGAAGCAATTGGTATCTGCTCTCCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGGCTGCTTGCGGAAATGGGCAAAACGGAAAATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCGACCCATTGTCTTACGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGCTTCGGCGATTGGAAGAGGCTTTGAGAATTGCTGAGAAGGAACGCAAAGCTAAGGAGGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTTTTGCAGAAGAATGTAGAGGAAGCTTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATACGGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCGGATGAAAACTAAAGTTTTGATTGAGTGTGCCTTCTCTTCCTCCTCACAATCATCAGATAAGAGGGCTCTGAGTAAGTAAACTTGAAGTTTTGCTGATTTTTGTTATCTTAGTCTTAGTTTGATCTGCCTTCTGCATGTAGTTCATTTGCGGGATAGAATATTTAAATAACTTTTCCTAGTATGCATTTGTTTTGATGACATTAGACTACTCATCAAATTAGTTGGAAACTTGGAGTACATGCAGATAGGCTGTTTGTAGCTTTATTATGTTGCAATTTGACTTATGTACTTCAATCAATTAATAATATTTATAAT

mRNA sequence

ACCAAGTGGAAGCAGCCCGGGATCCCAAGTAGCCCTAGCAGATAACAAAACGACGTAGTTCCGATTGTCGGAATCCGAACGGCATCGTCACCGGAGGTAGGTTTCGATAACTTGCAGTGGAACAGTCTTCGGAAACTTTCATTTCTGTCCCATTCCAAAATCTCTTTTTACTTCTTCTCGAAACTACCGTCTGCCAAACTCAACGACCTTCGACCAAATCCCTCTAACCACCCATAAACCCATTTCTCTCTTTCTTCCTCCGTCGCCATACCCATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCCATTCCATTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCAATGTCTACGCAACTACGCCAAAGCTGCGATTCTCATCGGTGCTGCAGCGACCATGGTTGGGAAATTCTCGAATTTGCCTGCCAGAGCTGAGACGCCTGCGGTGGTGGCTGAGGAAGCTTCAAGAATGGAGGAAACCTCCCCAGATAAGCGGATTGTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAACTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTGAAAATTTTGAAGCAATTGGTATCTGCTCTCCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGGCTGCTTGCGGAAATGGGCAAAACGGAAAATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCGACCCATTGTCTTACGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGCTTCGGCGATTGGAAGAGGCTTTGAGAATTGCTGAGAAGGAACGCAAAGCTAAGGAGGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTTTTGCAGAAGAATGTAGAGGAAGCTTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATACGGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCGGATGAAAACTAAAGTTTTGATTGAGTGTGCCTTCTCTTCCTCCTCACAATCATCAGATAAGAGGGCTCTGAGTAAGTAAACTTGAAGTTTTGCTGATTTTTGTTATCTTAGTCTTAGTTTGATCTGCCTTCTGCATGTAGTTCATTTGCGGGATAGAATATTTAAATAACTTTTCCTAGTATGCATTTGTTTTGATGACATTAGACTACTCATCAAATTAGTTGGAAACTTGGAGTACATGCAGATAGGCTGTTTGTAGCTTTATTATGTTGCAATTTGACTTATGTACTTCAATCAATTAATAATATTTATAAT

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCCATTCCATTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCAATGTCTACGCAACTACGCCAAAGCTGCGATTCTCATCGGTGCTGCAGCGACCATGGTTGGGAAATTCTCGAATTTGCCTGCCAGAGCTGAGACGCCTGCGGTGGTGGCTGAGGAAGCTTCAAGAATGGAGGAAACCTCCCCAGATAAGCGGATTGTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAACTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTGAAAATTTTGAAGCAATTGGTATCTGCTCTCCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGGCTGCTTGCGGAAATGGGCAAAACGGAAAATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCGACCCATTGTCTTACGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGCTTCGGCGATTGGAAGAGGCTTTGAGAATTGCTGAGAAGGAACGCAAAGCTAAGGAGGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTTTTGCAGAAGAATGTAGAGGAAGCTTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATACGGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCGGATGAAAACTAA

Protein sequence

MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVPVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN

Homology

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BLAST of IVF0016619 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.9e-92
Identity = 180/270 (66.67%), Postives = 219/270 (81.11%), Query Frame = 0


Query: 73  RNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQS 132
           +++AK+AILIGAA +M GKFS LP +AE+P            T+ +K   E  ++   + 
Sbjct: 56  KSFAKSAILIGAAVSMTGKFSTLPVKAESPV-----------TTIEKTYEEVKEEKLSEI 115

Query: 133 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAE 192
           +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+A P  TEWKFLMARLL E
Sbjct: 116 TPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGE 175

Query: 193 MGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKE 252
           MG+ ENAR++FEEIL  +PLS+EALFENALLMDR GEG AVL+RLE+AL +AE E   KE
Sbjct: 176 MGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKE 235

Query: 253 ARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFA 312
           ARDV+LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKN EAK+QFA
Sbjct: 236 ARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFA 295

Query: 313 KYRELSPKKFEVDGYLRTPLSRMKIFGSDE 343
           KYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 296 KYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

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BLAST of IVF0016619 vs. ExPASy Swiss-Prot
Match: Q3UV71 (Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 143 SEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMGKTENAREV 202
           +   E L  L       G  +EAL++ ++ VS  PS  E +  +A++LA MG+T+ A ++
Sbjct: 740 ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKI 799

Query: 203 FEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKEARDVKLIMAQ 262
              I++ +P   E     + +  +       L  +E+AL++  K+ K         ++++
Sbjct: 800 TSHIVSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPK---------VISE 859

Query: 263 IQFLQKN-------VEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAKYR 320
           + F + N       +++A +SY+  V  DP   + +   G I  +      A+  + +  
Sbjct: 860 LFFTKGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERAL 914

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BLAST of IVF0016619 vs. ExPASy TrEMBL
Match: A0A5D3BG83 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00680 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.4e-179
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 344
           LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of IVF0016619 vs. ExPASy TrEMBL
Match: A0A1S3CRV7 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.1e-178
Identity = 341/343 (99.42%), Postives = 342/343 (99.71%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPA VAEEASRMEET+PDKR
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 344
           LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of IVF0016619 vs. ExPASy TrEMBL
Match: A0A0A0KMW6 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.6e-154
Identity = 297/317 (93.69%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 29  MVSFSNNLRFAAPLSRHSISVHPFRVRASS--VPVPRTHHPVVQCLRNYAKAAILIGAAA 88
           MVSFSNNLRFAAPLSR S+SVHPFRVRASS  VPVPRTHHPVV CLRNYAKAAILIGAAA
Sbjct: 1   MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA 60

Query: 89  TMVGKFSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQSSPLNDFLESNSEAV 148
           TMVGKFSNLPARAE+ AVVAEEASR+EET+ D RI EDSDQDGRQSSPLNDFLESNSEAV
Sbjct: 61  TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV 120

Query: 149 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMGKTENAREVFEEI 208
           EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLL EMGKTE+AREVFEEI
Sbjct: 121 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI 180

Query: 209 LAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKEARDVKLIMAQIQFL 268
           LAV+PLS+EALFENALLMDRCGEGEAV+RRLEEALRIAE E KAKEARDVKLIMAQIQFL
Sbjct: 181 LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 240

Query: 269 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAKYRELSPKKFEVDG 328
           QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKN EAKQQFAKYRELSPKKFEVDG
Sbjct: 241 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 300

Query: 329 YLRTPLSRMKIFGSDEN 344
           YLRTPLSRMKIFGSDEN
Sbjct: 301 YLRTPLSRMKIFGSDEN 317

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BLAST of IVF0016619 vs. ExPASy TrEMBL
Match: A0A6J1CXB6 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015681 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.3e-148
Identity = 298/344 (86.63%), Postives = 319/344 (92.73%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FN S  K VS   NLRFAAPLSR+S+ V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VP--RTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPD 120
           +P    +HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PA VAEEASRMEE   D
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEE---D 120

Query: 121 KRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
           +++VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 RQVVEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180

Query: 181 VTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240

Query: 241 EALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE E KAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIY 300

Query: 301 SLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 343
           SLLDKN EA++QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 SLLDKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of IVF0016619 vs. ExPASy TrEMBL
Match: A0A6J1GYL7 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458452 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.2e-141
Identity = 291/343 (84.84%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F  S SK V    NLRFAAP+SR S+SVH FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVP-PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           V R +HPVVQC +NYA+AAILIGAAATMVGKFS+LPARAE+P VV EEASR+EE   ++R
Sbjct: 61  VSR-NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEE---EQR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  SVT
Sbjct: 121 IVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFL ARLL EMGKTENAREVFEEILA +PLS+EALFENALLMDRCGEGEAVL RLE+A
Sbjct: 181 EWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           LRIAE E+KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+KEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 344
           LDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

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BLAST of IVF0016619 vs. NCBI nr
Match: TYJ97188.1 (protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1637), Expect = 1.17e-228
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343
           LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of IVF0016619 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 632 bits (1630), Expect = 1.36e-227
Identity = 341/343 (99.42%), Postives = 342/343 (99.71%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPA VAEEASRMEET+PDKR
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343
           LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of IVF0016619 vs. NCBI nr
Match: XP_004149472.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical protein Csa_017797 [Cucumis sativus])

HSP 1 Score: 592 bits (1527), Expect = 7.23e-212
Identity = 323/345 (93.62%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFAS+SSPSSSS SSIFNFNPSNSKMVSFSNNLRFAAPLSR S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VP--RTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPD 120
           VP  RTHHPVV CLRNYAKAAILIGAAATMVGKFSNLPARAE+ AVVAEEASR+EET+ D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 KRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
            RI EDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLL EMGKTE+AREVFEEILAV+PLS+EALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE E KAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343
           SLLDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]

BLAST of IVF0016619 vs. NCBI nr
Match: XP_038876236.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 567 bits (1461), Expect = 6.56e-202
Identity = 311/343 (90.67%), Postives = 326/343 (95.04%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFAS+SSP+SSSLSSIFNFN S SKMVS  NNLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPTSSSLSSIFNFNASKSKMVSLPNNLRFAAPLSRNSVSVHPFRVRASSVP 60

Query: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120
           V R +HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PA VAEEASRMEE   D+R
Sbjct: 61  VSR-NHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEE---DQR 120

Query: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180
           I EDSDQ+G+QSSPLNDFLESNSEA+EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IAEDSDQEGKQSSPLNDFLESNSEAIEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180

Query: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAREVFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLGEMGKTENAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300
           L+IAE E K KEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL
Sbjct: 241 LKIAENENKVKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNMEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 339

[Close]

BLAST of IVF0016619 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 534 bits (1376), Expect = 6.20e-189
Identity = 298/344 (86.63%), Postives = 319/344 (92.73%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FN S  K VS   NLRFAAPLSR+S+ V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPRT--HHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPD 120
           +P    +HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PA VAEEASRMEE   D
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEE---D 120

Query: 121 KRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
           +++VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 RQVVEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180

Query: 181 VTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240

Query: 241 EALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE E KAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIY 300

Query: 301 SLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 342
           SLLDKN EA++QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 SLLDKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of IVF0016619 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 3.5e-93
Identity = 180/270 (66.67%), Postives = 219/270 (81.11%), Query Frame = 0


Query: 73  RNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQS 132
           +++AK+AILIGAA +M GKFS LP +AE+P            T+ +K   E  ++   + 
Sbjct: 56  KSFAKSAILIGAAVSMTGKFSTLPVKAESPV-----------TTIEKTYEEVKEEKLSEI 115

Query: 133 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAE 192
           +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+A P  TEWKFLMARLL E
Sbjct: 116 TPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGE 175

Query: 193 MGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKE 252
           MG+ ENAR++FEEIL  +PLS+EALFENALLMDR GEG AVL+RLE+AL +AE E   KE
Sbjct: 176 MGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKE 235

Query: 253 ARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFA 312
           ARDV+LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKN EAK+QFA
Sbjct: 236 ARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFA 295

Query: 313 KYRELSPKKFEVDGYLRTPLSRMKIFGSDE 343
           KYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 296 KYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of IVF0016619 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-35
Identity = 82/205 (40.00%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 135 LNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMG 194
           L ++L S+ + VEAL+SL++ ++++ +  EA++++ +L+   P   EW  L A + +  G
Sbjct: 119 LEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSG 178

Query: 195 KTENAREVFEEILAVDPLSYEALFENALLMDRCGEG-EAVLRRLEEALRIAEKERKAKEA 254
             E+A+  FEEIL  DPL  EA     +     G+   AV +R+EEA+   +KE+  K+ 
Sbjct: 179 DLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDL 238

Query: 255 RDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAK 314
           RD KL++AQI+ ++    EALK Y+ELVKE+P DFRPY CQG+IY++L K  EA++QF K
Sbjct: 239 RDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEK 298

Query: 315 YRELSPKKFEVDGYLRTPLSRMKIF 339
           +R L PK      Y    +   K+F
Sbjct: 299 FRRLVPKNHPYREYFMDNMVASKLF 323

[Close]

BLAST of IVF0016619 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-31
Identity = 100/310 (32.26%), Postives = 166/310 (53.55%), Query Frame = 0


Query: 32  FSNNLRFAAPLSRHSISVHPFRVRASSVPVPRTHHPVVQCLRNYAKAAILIGAAATMVGK 91
           F ++++  + L   SI     + + S  P+P++        R +    I +  AA ++  
Sbjct: 31  FKSSIQPISSLKSASIKASSSKFQNSITPLPKS-----TPFRLFKSTCITLTTAAALL-- 90

Query: 92  FSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQSSPLNDFLESNSEAVEALKS 151
            +NL    ++PA+ A  A      S +   +E+ ++       L++ L ++   V+AL+S
Sbjct: 91  LANL--HLKSPAIAAPIAPPPSVESKENVTLEEEER------ALDEHLITHPSDVDALRS 150

Query: 152 LLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMGKTENAREVFEEILAVDP 211
           L++ K+++ +  EA++++ +L+   P   EW  L A +    G  + A+  FEEILA DP
Sbjct: 151 LMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDP 210

Query: 212 LSYEALFENALLMDRCGEG---EAVLRRLEEALRIAEKERKAKEARDVKLIMAQIQFLQK 271
           L  EA   + LLM     G   + V  R+EEA+   +KE    + RD KL++AQI+ ++ 
Sbjct: 211 LRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEG 270

Query: 272 NVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAKYRELSPKKFEVDGYL 331
              EALK Y+ELVKE+P DFRPY CQG+IY+LL K  +A++QF  +R+L PK      Y 
Sbjct: 271 KHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYF 323

Query: 332 RTPLSRMKIF 339
              +   K+F
Sbjct: 331 MDNMIATKLF 323

[Close]

BLAST of IVF0016619 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-30
Identity = 82/252 (32.54%), Postives = 140/252 (55.56%), Query Frame = 0


Query: 77  KAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKRIVEDSDQDGRQSSPLN 136
           KAAIL+  +   +G  S+ PA A   A V  +A   +E   +K                 
Sbjct: 82  KAAILLVGSFVFLGFCSSKPALALPTATVVSQAELEDEKMFEK----------------- 141

Query: 137 DFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLAEMGKT 196
             LE+  E +EA+K+++ +K+  G++E+A+K +++L+   P   EWK L A     MG+ 
Sbjct: 142 -LLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGEL 201

Query: 197 ENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEALRIAEKERKAKEARDV 256
             A+ ++++IL   PL   AL   A++M +  +  +V   L EA+ +A +  +  E R++
Sbjct: 202 SKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNI 261

Query: 257 KLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNTEAKQQFAKYRE 316
           ++++ Q+  ++   EE LK ++++V ++P DFRPY CQG++YSL+DK  EA QQF  Y  
Sbjct: 262 QVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWS 314

Query: 317 LSPKKFEVDGYL 329
           L P +F   G+L
Sbjct: 322 LVPGEFPQKGFL 314

[Close]

BLAST of IVF0016619 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-28
Identity = 98/295 (33.22%), Postives = 155/295 (52.54%), Query Frame = 0


Query: 54  VRASSVPV-PRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRM 113
           +RASS    P+       C+     AA+L  +        S  P  A T        S  
Sbjct: 43  IRASSFSSNPKPSFLKTTCVTLTTAAALLSASL-----HLSTKPVTAATLVSPPPPPSTA 102

Query: 114 EETSPDKRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQL 173
            + + D+  +    ++  + + L   L  N   VEAL+SL++ K +    + AL+IL +L
Sbjct: 103 ADLTSDQ--ISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRL 162

Query: 174 VSALPSVTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEA 233
           +   P   EW+ L A++    G  ++A + FEE+L+ DP   EA   + L+M    E E+
Sbjct: 163 IEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESES 222

Query: 234 VL----RRLEEALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDF 293
            L     R+ EA+   +KE K K+ RD  L++AQI+ ++ N  EAL+ Y+ELVK++P DF
Sbjct: 223 KLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDF 282

Query: 294 RPYFCQGMIYSLLDKNTEAKQQFAKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 343
           RPY CQG+IY+L+ K  EA++QFA++R L P+      YL    L+  K+F  ++
Sbjct: 283 RPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

The following BLAST results are available for this feature:

BLAST of IVF0016619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	4.9e-92	66.67	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
Q3UV71	3.0e-04	22.28	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2	[more]

BLAST of IVF0016619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BG83	9.4e-179	100.00	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174...	[more]
A0A1S3CRV7	6.1e-178	99.42	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4...	[more]
A0A0A0KMW6	3.6e-154	93.69	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 ...	[more]
A0A6J1CXB6	1.3e-148	86.63	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110156...	[more]
A0A6J1GYL7	1.2e-141	84.84	protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145845...	[more]

BLAST of IVF0016619 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97188.1	1.17e-228	100.00	protein SLOW GREEN 1 [Cucumis melo var. makuwa]	[more]
XP_008466719.1	1.36e-227	99.42	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo]	[more]
XP_004149472.1	7.23e-212	93.62	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical...	[more]
XP_038876236.1	6.56e-202	90.67	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022146470.1	6.20e-189	86.63	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]

BLAST of IVF0016619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18420.1	3.5e-93	66.67	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	4.3e-35	40.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	2.2e-31	32.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	1.9e-30	32.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	1.8e-28	33.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163
None	No IPR available	COILS	Coil	Coil	coord: 227..254
None	No IPR available	COILS	Coil	Coil	coord: 263..283
None	No IPR available	PFAM	PF14559	TPR_19	coord: 157..212 e-value: 3.0E-6 score: 27.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..137
None	No IPR available	PANTHER	PTHR26312:SF138	PROTEIN SLOW GREEN 1, CHLOROPLASTIC	coord: 88..342
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 88..342
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 288..321 e-value: 75.0 score: 7.3 coord: 254..287 e-value: 3.2 score: 16.7 coord: 180..213 e-value: 29.0 score: 11.0
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 258..286 e-value: 0.031 score: 14.9
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 180..213 score: 8.1719
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 254..287 score: 8.0834
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 72..256 e-value: 4.9E-14 score: 54.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 257..329 e-value: 2.2E-9 score: 38.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 140..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016619.2	IVF0016619.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding