IVF0016303 (gene) Melon (IVF77) v1

Overview


Name	IVF0016303
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome b6-f complex subunit 4
Location	chr09: 4186265 .. 4186588 (-)
RNA-Seq Expression	IVF0016303
Synteny	IVF0016303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTGAGCCTGCATATCCATTTGCAACTCCTTTGGAAATATTGTTGAAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTATAGTGCCAAAGAAGTTCTCGAGTGTTCTTTTAATGGTTTTTGTACCGGTGGGATTATTAACTGTATCATTTTTAAAGGATGTCAATAAATTCCAAAATCTATTTCGTCGTCTAATAGTGACAACCATCTTTTTGATTGGTATCGCAGTAACCCTTTGGTTTGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGATCTTTTTAAAATTGATTCAATTTTTAAATAA

mRNA sequence

ATGATTGGTGAGCCTGCATATCCATTTGCAACTCCTTTGGAAATATTGTTGAAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTATAGTGCCAAAGAAGTTCTCGAGTGTTCTTTTAATGGTTTTTGTACCGGTGGGATTATTAACTGTATCATTTTTAAAGGATGTCAATAAATTCCAAAATCTATTTCGTCGTCTAATAGTGACAACCATCTTTTTGATTGGTATCGCAGTAACCCTTTGGTTTGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGATCTTTTTAAAATTGATTCAATTTTTAAATAA

Coding sequence (CDS)

ATGATTGGTGAGCCTGCATATCCATTTGCAACTCCTTTGGAAATATTGTTGAAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTATAGTGCCAAAGAAGTTCTCGAGTGTTCTTTTAATGGTTTTTGTACCGGTGGGATTATTAACTGTATCATTTTTAAAGGATGTCAATAAATTCCAAAATCTATTTCGTCGTCTAATAGTGACAACCATCTTTTTGATTGGTATCGCAGTAACCCTTTGGTTTGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGATCTTTTTAAAATTGATTCAATTTTTAAATAA

Protein sequence

MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK

Homology

[Close]

BLAST of IVF0016303 vs. ExPASy Swiss-Prot
Match: Q14FC6 (Cytochrome b6-f complex subunit 4 OS=Populus alba OX=43335 GN=petD PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.4e-37
Identity = 81/105 (77.14%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSI 106
           QN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF+IDSI
Sbjct: 121 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSI 165

[Close]

BLAST of IVF0016303 vs. ExPASy Swiss-Prot
Match: Q7YJU7 (Cytochrome b6-f complex subunit 4 OS=Calycanthus floridus var. glaucus OX=212734 GN=petD PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 9.1e-37
Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVLVPTGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF++D   K
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQVDLTVK 167

[Close]

BLAST of IVF0016303 vs. ExPASy Swiss-Prot
Match: Q06GW6 (Cytochrome b6-f complex subunit 4 OS=Drimys granadensis OX=224735 GN=petD PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-36
Identity = 80/103 (77.67%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPTGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKID 104
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF+ID
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQID 163

[Close]

BLAST of IVF0016303 vs. ExPASy Swiss-Prot
Match: Q3BAK6 (Cytochrome b6-f complex subunit 4 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 GN=petD PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-36
Identity = 79/103 (76.70%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP+GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPLGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKID 104
           QN FRR + TT+FLIG AV LW GIGATLPI+KSLTL LF+ID
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLFQID 163

[Close]

BLAST of IVF0016303 vs. ExPASy Swiss-Prot
Match: Q6EW21 (Cytochrome b6-f complex subunit 4 OS=Nymphaea alba OX=34301 GN=petD PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.7e-36
Identity = 79/102 (77.45%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKI 103
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF+I
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQI 162

[Close]

BLAST of IVF0016303 vs. ExPASy TrEMBL
Match: A0A0E3XDJ9 (Cytochrome b6-f complex subunit 4 OS=Quercus aquifolioides OX=1495044 GN=petD PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.0e-36
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVLVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL +FKIDSI K
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGIFKIDSIVK 167

[Close]

BLAST of IVF0016303 vs. ExPASy TrEMBL
Match: A0A650FD52 (Cytochrome b6-f complex subunit 4 OS=Casearia decandra OX=1186093 GN=petD PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 75  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 134

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF+IDSIFK
Sbjct: 135 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSIFK 181

[Close]

BLAST of IVF0016303 vs. ExPASy TrEMBL
Match: A0A6H0ER51 (Cytochrome b6-f complex subunit 4 OS=Sechium edule OX=184140 GN=petD PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 84/107 (78.50%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LFKIDSI K
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFKIDSITK 167

[Close]

BLAST of IVF0016303 vs. ExPASy TrEMBL
Match: A0A6G9KX30 (Cytochrome b6-f complex subunit 4 OS=Garcinia gummi-gutta OX=1220707 GN=petD PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 60  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 119

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TT+FLIG  V LWFGIGATLPIDKSLTL LF+IDSI K
Sbjct: 120 QNPFRRPVATTVFLIGTVVALWFGIGATLPIDKSLTLGLFQIDSIVK 166

[Close]

BLAST of IVF0016303 vs. ExPASy TrEMBL
Match: A0A291B5P1 (Cytochrome b6-f complex subunit 4 OS=Bergenia scopulosa OX=1397840 GN=petD PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 84/107 (78.50%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 108
           QN FRR + TTIFLIG AV LW GIGATLPIDKSLTL LF+IDSI K
Sbjct: 121 QNPFRRPVATTIFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 167

[Close]

BLAST of IVF0016303 vs. NCBI nr
Match: YP_009133083.1 (PetD [Quercus aquifolioides] >AKC05497.1 PetD [Quercus aquifolioides])

HSP 1 Score: 159 bits (401), Expect = 3.23e-47
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVLVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 107
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL +FKIDSI K
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGIFKIDSIVK 167

[Close]

BLAST of IVF0016303 vs. NCBI nr
Match: QIT04164.1 (cytochrome b6/f subunit IV [Sechium edule])

HSP 1 Score: 158 bits (400), Expect = 4.58e-47
Identity = 84/107 (78.50%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 107
           QN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LFKIDSI K
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFKIDSITK 167

[Close]

BLAST of IVF0016303 vs. NCBI nr
Match: WP_206639772.1 (cytochrome b6-f complex subunit IV, partial [Vibrio vulnificus] >MBN8156776.1 cytochrome b6-f complex subunit IV [Vibrio vulnificus])

HSP 1 Score: 155 bits (393), Expect = 8.25e-47
Identity = 82/107 (76.64%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 107
           QN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF+IDSI K
Sbjct: 61  QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSIVK 107

[Close]

BLAST of IVF0016303 vs. NCBI nr
Match: QGU84438.1 (cytochrome b6/f complex subunit IV [Casearia decandra])

HSP 1 Score: 158 bits (400), Expect = 8.43e-47
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 75  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 134

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 107
           QN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF+IDSIFK
Sbjct: 135 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSIFK 181

[Close]

BLAST of IVF0016303 vs. NCBI nr
Match: YP_009760318.1 (cytochrome b6/f complex subunit IV [Garcinia gummi-gutta] >QIQ57121.1 cytochrome b6/f complex subunit IV [Garcinia gummi-gutta])

HSP 1 Score: 158 bits (399), Expect = 8.56e-47
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 60  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 119

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK 107
           QN FRR + TT+FLIG  V LWFGIGATLPIDKSLTL LF+IDSI K
Sbjct: 120 QNPFRRPVATTVFLIGTVVALWFGIGATLPIDKSLTLGLFQIDSIVK 166

[Close]

BLAST of IVF0016303 vs. TAIR 10
Match: ATCG00730.1 (photosynthetic electron transfer D )

HSP 1 Score: 147.1 bits (370), Expect = 7.9e-36
Identity = 77/100 (77.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKF 60
           MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF 101
           QN FRR + TT+FLIG A  LW GIGATLPIDKSLTL LF
Sbjct: 121 QNPFRRPVATTVFLIGTAAALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of IVF0016303 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04
Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 5   PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLF 64
           PA P +TP  I+ +WYF P+  ILR +P K   V  +  V + LL + F K +    + F
Sbjct: 265 PANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF 324

Query: 65  R 66
           R
Sbjct: 325 R 325

[Close]

BLAST of IVF0016303 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04
Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 5   PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLF 64
           PA P +TP  I+ +WYF P+  ILR +P K   V  +  V + LL + F K +    + F
Sbjct: 265 PANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF 324

Query: 65  R 66
           R
Sbjct: 325 R 325

The following BLAST results are available for this feature:

BLAST of IVF0016303 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14FC6	5.4e-37	77.14	Cytochrome b6-f complex subunit 4 OS=Populus alba OX=43335 GN=petD PE=3 SV=1	[more]
Q7YJU7	9.1e-37	74.77	Cytochrome b6-f complex subunit 4 OS=Calycanthus floridus var. glaucus OX=212734...	[more]
Q06GW6	1.6e-36	77.67	Cytochrome b6-f complex subunit 4 OS=Drimys granadensis OX=224735 GN=petD PE=3 S...	[more]
Q3BAK6	3.5e-36	76.70	Cytochrome b6-f complex subunit 4 OS=Phalaenopsis aphrodite subsp. formosana OX=...	[more]
Q6EW21	7.7e-36	77.45	Cytochrome b6-f complex subunit 4 OS=Nymphaea alba OX=34301 GN=petD PE=3 SV=1	[more]

BLAST of IVF0016303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0E3XDJ9	8.0e-36	77.57	Cytochrome b6-f complex subunit 4 OS=Quercus aquifolioides OX=1495044 GN=petD PE...	[more]
A0A650FD52	1.0e-35	77.57	Cytochrome b6-f complex subunit 4 OS=Casearia decandra OX=1186093 GN=petD PE=3 S...	[more]
A0A6H0ER51	1.0e-35	78.50	Cytochrome b6-f complex subunit 4 OS=Sechium edule OX=184140 GN=petD PE=3 SV=1	[more]
A0A6G9KX30	1.4e-35	77.57	Cytochrome b6-f complex subunit 4 OS=Garcinia gummi-gutta OX=1220707 GN=petD PE=...	[more]
A0A291B5P1	1.8e-35	78.50	Cytochrome b6-f complex subunit 4 OS=Bergenia scopulosa OX=1397840 GN=petD PE=3 ...	[more]

BLAST of IVF0016303 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009133083.1	3.23e-47	77.57	PetD [Quercus aquifolioides] >AKC05497.1 PetD [Quercus aquifolioides]	[more]
QIT04164.1	4.58e-47	78.50	cytochrome b6/f subunit IV [Sechium edule]	[more]
WP_206639772.1	8.25e-47	76.64	cytochrome b6-f complex subunit IV, partial [Vibrio vulnificus] >MBN8156776.1 cy...	[more]
QGU84438.1	8.43e-47	77.57	cytochrome b6/f complex subunit IV [Casearia decandra]	[more]
YP_009760318.1	8.56e-47	77.57	cytochrome b6/f complex subunit IV [Garcinia gummi-gutta] >QIQ57121.1 cytochrome...	[more]

BLAST of IVF0016303 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00730.1	7.9e-36	77.00	photosynthetic electron transfer D	[more]
AT2G07727.1	6.1e-04	37.70	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	6.1e-04	37.70	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005798	Cytochrome b/b6, C-terminal	PFAM	PF00032	Cytochrom_B_C	coord: 5..91 e-value: 3.0E-12 score: 46.7
IPR005798	Cytochrome b/b6, C-terminal	PROSITE	PS51003	CYTB_CTER	coord: 1..107 score: 11.871069
IPR005870	Cytochrome b6/f complex, subunit IV	TIGRFAM	TIGR01156	TIGR01156	coord: 1..100 e-value: 4.5E-45 score: 151.4
None	No IPR available	GENE3D	1.10.287.980	plastocyanin oxidoreductase	coord: 7..99 e-value: 1.1E-19 score: 72.4
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 2..98
None	No IPR available	PANTHER	PTHR19271:SF22	CYTOCHROME B6/F COMPLEX, SUBUNIT IV-RELATED	coord: 2..98
IPR036150	Cytochrome b/b6, C-terminal domain superfamily	SUPERFAMILY	81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016303.1	IVF0016303.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0042651	thylakoid membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity