IVF0016257 (gene) Melon (IVF77) v1

Overview
NameIVF0016257
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 20195104 .. 20195487 (-)
RNA-Seq ExpressionIVF0016257
SyntenyIVF0016257
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGAAGGGGGAGGAACGCGCTGCAGATCTTCCTTAGGGTTGGGGAGTTCTTCTTGGCTAAAAATGCCCTTTTGGTCAAGTAAGGGCTTATTAAAGTCAGGTCGAGAGTTAGAGGATGTTGTTATGATGATGGGGGATTCAGAAAGTGGTGAGAGGATAATAGGCAACATAGGTGATAGCGGCCTAGGAGAGTTGGATTATGGGAAAGTGGAAGGTGCAGGATGTTGGTATGATTGATAAGGGGGGAGGCCTAGAAGAGTTGGATTACGGGAAATTGAAAGGTGGAGGATGCTGGTATGATTGATAAGGGGGATTGGATTTTTGTATAAGGAGGAGGAGGATTTGGATTTTGGAGGAGGTGATGAGAGTTTTTGGGAGTAG

mRNA sequence

ATGTACGAAGGGGGAGGAACGCGCTGCAGATCTTCCTTAGGGTTGGGGAGTTCTTCTTGGCTAAAAATGCCCTTTTGGTCAAGTAAGGGCTTATTAAAGTCAGGTCGAGAGTTAGAGGATGTTGTTATGATGATGGGGGATTCAGAAAGTGGTGAGAGGATAATAGGCAACATAGGTGATAGCGGCCTAGGAGAGTTGGATTATGGGAAAGTGGAAGGTGCAGGATGTTGGGGGATTGGATTTTTGTATAAGGAGGAGGAGGATTTGGATTTTGGAGGAGGTGATGAGAGTTTTTGGGAGTAG

Coding sequence (CDS)

ATGTACGAAGGGGGAGGAACGCGCTGCAGATCTTCCTTAGGGTTGGGGAGTTCTTCTTGGCTAAAAATGCCCTTTTGGTCAAGTAAGGGCTTATTAAAGTCAGGTCGAGAGTTAGAGGATGTTGTTATGATGATGGGGGATTCAGAAAGTGGTGAGAGGATAATAGGCAACATAGGTGATAGCGGCCTAGGAGAGTTGGATTATGGGAAAGTGGAAGGTGCAGGATGTTGGGGGATTGGATTTTTGTATAAGGAGGAGGAGGATTTGGATTTTGGAGGAGGTGATGAGAGTTTTTGGGAGTAG

Protein sequence

MYEGGGTRCRSSLGLGSSSWLKMPFWSSKGLLKSGRELEDVVMMMGDSESGERIIGNIGDSGLGELDYGKVEGAGCWGIGFLYKEEEDLDFGGGDESFWE
Homology
[Close]
BLAST of IVF0016257 vs. ExPASy TrEMBL
Match: A0A5D3BDS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00240 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 46  GDSESGERIIGNIGDSGLGELDYGKVEGAGCW 78
           G  ESGE I+GNIGD+GLGELDYGKVEG GCW
Sbjct: 422 GCLESGESIMGNIGDNGLGELDYGKVEGGGCW 453

[Close]
BLAST of IVF0016257 vs. NCBI nr
Match: TYJ97149.1 (hypothetical protein E5676_scaffold174G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 3.07e-07
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 49  ESGERIIGNIGDSGLGELDYGKVEGAGCW 77
           ESGE I+GNIGD+GLGELDYGKVEG GCW
Sbjct: 425 ESGESIMGNIGDNGLGELDYGKVEGGGCW 453

The following BLAST results are available for this feature:
BLAST of IVF0016257 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0016257 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BDS41.8e-0581.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0016257 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ97149.13.07e-0786.21hypothetical protein E5676_scaffold174G00240 [Cucumis melo var. makuwa][more]
BLAST of IVF0016257 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016257.1IVF0016257.1mRNA