IVF0016178 (gene) Melon (IVF77) v1

Overview


Name	IVF0016178
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr05: 22743662 .. 22745830 (+)
RNA-Seq Expression	IVF0016178
Synteny	IVF0016178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATTATGACTATCAACTTCCGCCAACAACATCACTACACAGTGAATCTGAATCCCTCCGCTATTGCCACTCGAATTTTCCACCGCCGTAACCTCCGGCGATTTTAGACTCTCCCACGCATTCCATCAACTCCTCCTTCATCAAATTCATGGCACTCCGATGTCTCTATCTCTAATAACCCTCCGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGAAGATTCAGATGGAAAATGCGACTTCTTGGTTGTAGCTCTGTGCCCTTGTTTAGTATGTTTGATTCTCGTTCTCATCGTAGTTTTCATTCTTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTCCACCTTCAAGAACGATTGATTTCAGAAATCCCCTCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTATTGCGATTTGAATAATTCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGATGATGATCGTGAGTGTGATTCGAGGGTGGATTCGACTGAAGTCGATCGCGTATGCAAGGTGATCGACGAATTGTTTGCCTTAGATAGGAACATGGAGGCAGTTCTTGATGAATGTGGAGTAAAATTATCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACGAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACAAGGCAGTTTGAAACAATGGTTTCCTTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTCTTTGAGTTGATGAAGAAGTATAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTTGATAGTTTAGGGAGAGCAAAGCTTGGTAAAGAAGCTCTAACAATTTTTGAGAAGTTACACGGTAGGTTTACGCCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAACCAAGGGACCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGAATTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAAGGAGCGGGATGTCGACCTGATGTTGCAATCTACACTTGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGGGCTACTGAAAGAAATGAGAGCAAACGGTTGCCCGCCTGATGGGAAGACTTATAATGCTCTAATCAAGTTGATGACGAATAAGCGGATGCCCGATGATGCAGTTCGGATATACAAGAAGATGATCGAGAATGGCTTTGAACCAACAATCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGTGTTGCTGCTTGGAATGAGATGAAGCGAAAAGGGTGTTGCCCCGACGATAACTCGTATACTGTGTTTATAGGGGGGCTTATAAGTCTGGGACGTTGTGTCGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAGTGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTACTAATGGTGACCATAGCCCTTAGAATCTCATTTAATTAAACACCATTTTTCACTTAATCCATTCTGTTCTATACTATTTATTACTGTATTTTAACATTAGATTGTATATTTTATTAGAATTTTAGCTTAGATTTCGTCCACGTTAGTTTGATATTTTA

mRNA sequence

GTATTATGACTATCAACTTCCGCCAACAACATCACTACACAGTGAATCTGAATCCCTCCGCTATTGCCACTCGAATTTTCCACCGCCGTAACCTCCGGCGATTTTAGACTCTCCCACGCATTCCATCAACTCCTCCTTCATCAAATTCATGGCACTCCGATGTCTCTATCTCTAATAACCCTCCGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGAAGATTCAGATGGAAAATGCGACTTCTTGGTTGTAGCTCTGTGCCCTTGTTTAGTATGTTTGATTCTCGTTCTCATCGTAGTTTTCATTCTTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTCCACCTTCAAGAACGATTGATTTCAGAAATCCCCTCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTATTGCGATTTGAATAATTCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGATGATGATCGTGAGTGTGATTCGAGGGTGGATTCGACTGAAGTCGATCGCGTATGCAAGGTGATCGACGAATTGTTTGCCTTAGATAGGAACATGGAGGCAGTTCTTGATGAATGTGGAGTAAAATTATCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACGAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACAAGGCAGTTTGAAACAATGGTTTCCTTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTCTTTGAGTTGATGAAGAAGTATAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTTGATAGTTTAGGGAGAGCAAAGCTTGGTAAAGAAGCTCTAACAATTTTTGAGAAGTTACACGGTAGGTTTACGCCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAACCAAGGGACCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGAATTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAAGGAGCGGGATGTCGACCTGATGTTGCAATCTACACTTGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGGGCTACTGAAAGAAATGAGAGCAAACGGTTGCCCGCCTGATGGGAAGACTTATAATGCTCTAATCAAGTTGATGACGAATAAGCGGATGCCCGATGATGCAGTTCGGATATACAAGAAGATGATCGAGAATGGCTTTGAACCAACAATCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGTGTTGCTGCTTGGAATGAGATGAAGCGAAAAGGGTGTTGCCCCGACGATAACTCGTATACTGTGTTTATAGGGGGGCTTATAAGTCTGGGACGTTGTGTCGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAGTGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTACTAATGGTGACCATAGCCCTTAGAATCTCATTTAATTAAACACCATTTTTCACTTAATCCATTCTGTTCTATACTATTTATTACTGTATTTTAACATTAGATTGTATATTTTATTAGAATTTTAGCTTAGATTTCGTCCACGTTAGTTTGATATTTTA

Coding sequence (CDS)

ATGTCTCTATCTCTAATAACCCTCCGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGAAGATTCAGATGGAAAATGCGACTTCTTGGTTGTAGCTCTGTGCCCTTGTTTAGTATGTTTGATTCTCGTTCTCATCGTAGTTTTCATTCTTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTCCACCTTCAAGAACGATTGATTTCAGAAATCCCCTCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTATTGCGATTTGAATAATTCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGATGATGATCGTGAGTGTGATTCGAGGGTGGATTCGACTGAAGTCGATCGCGTATGCAAGGTGATCGACGAATTGTTTGCCTTAGATAGGAACATGGAGGCAGTTCTTGATGAATGTGGAGTAAAATTATCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACGAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACAAGGCAGTTTGAAACAATGGTTTCCTTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTCTTTGAGTTGATGAAGAAGTATAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTTGATAGTTTAGGGAGAGCAAAGCTTGGTAAAGAAGCTCTAACAATTTTTGAGAAGTTACACGGTAGGTTTACGCCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAACCAAGGGACCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGAATTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAAGGAGCGGGATGTCGACCTGATGTTGCAATCTACACTTGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGGGCTACTGAAAGAAATGAGAGCAAACGGTTGCCCGCCTGATGGGAAGACTTATAATGCTCTAATCAAGTTGATGACGAATAAGCGGATGCCCGATGATGCAGTTCGGATATACAAGAAGATGATCGAGAATGGCTTTGAACCAACAATCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGTGTTGCTGCTTGGAATGAGATGAAGCGAAAAGGGTGTTGCCCCGACGATAACTCGTATACTGTGTTTATAGGGGGGCTTATAAGTCTGGGACGTTGTGTCGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAGTGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTACTAATGGTGACCATAGCCCTTAG

Protein sequence

MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSRSHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNNSDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIARWAEMMRKRVKRRNPTNFTNGDHSP

Homology

[Close]

BLAST of IVF0016178 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 4.1e-206
Identity = 345/492 (70.12%), Postives = 410/492 (83.33%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 104 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 163

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 223

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID+G KPDIVAHN MLEGL
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR +K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+ A RIY K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W EM +KG CPDDNSYTV I GLI  G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 584 WAQMTRRRFKQR 595

[Close]

BLAST of IVF0016178 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 2.1e-205
Identity = 345/492 (70.12%), Postives = 409/492 (83.13%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 103 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 162

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 163 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 222

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 223 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 282

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G KPDIVAHN MLEGL
Sbjct: 283 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR  K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+   RIY K
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W+EM +KG CPDDNSYTV I GLIS G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 582

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 583 WAQMTRRRCKQR 594

[Close]

BLAST of IVF0016178 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 1.7e-204
Identity = 344/492 (69.92%), Postives = 408/492 (82.93%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 104 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 163

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGT 223

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G KPDIVAHN MLEGL
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR  K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+   RIY K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W+EM +KG CPDDNSYTV I GLIS G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 584 WAQMTRRRCKQR 595

[Close]

BLAST of IVF0016178 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.4e-67
Identity = 133/443 (30.02%), Postives = 244/443 (55.08%), Query Frame = 0


Query: 145 STEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQ 204
           S + +R+CK++ +    D  +E +L+E  VKLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 205 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 264
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 265 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKL-HGRFTPNLQTYTVLLN 324
           A+G F  M+++ +K+     N +LD+L +++   +A  +F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 325 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSP 384
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 385 DVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLL 444
               +  L+     + K+ +A+E+FE  + +G   +   Y  L+  +   +RM+  Y  +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 445 KEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQT 504
            EMR  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 505 RNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDY 564
              +M +  W+EMK KG  P  + ++  I  L    +  EA +Y  EM++ G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 565 NKFAADFSRAGRPDILEELAQKM 587
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of IVF0016178 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 257.3 bits (656), Expect = 4.5e-67
Identity = 134/422 (31.75%), Postives = 245/422 (58.06%), Query Frame = 0


Query: 165 MEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGK 224
           +++ LD+ G+++S ++V +VL RF+ A    +RFF W+ ++  + H  + Y+MM+    K
Sbjct: 87  LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146

Query: 225 TRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETI 284
            RQ++ M  L+  M +K++L +ETF I  + +A A++  +A+  F +M+KY     +   
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206

Query: 285 NCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE 344
           N LL +L ++K  ++A  +FE +  RFTP+ +TY++LL GW +  NL +A +++ +MID 
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266

Query: 345 GFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEA 404
           G  PDIV ++ M++ L +  +  +A+ +   M      P    Y++LV  +  + +++EA
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326

Query: 405 VEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKL 464
           V+ F EM+ +G + DVA++  LI  F    RM  VY +LKEM++ G  P+ K+ N +++ 
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386

Query: 465 MTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPD 524
           +  +   D+A  +++KMI+   EP   TY+M++K + + +  E     W  M++KG  P 
Sbjct: 387 LIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 446

Query: 525 DNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQ 584
            ++++V I GL       +A   LEEMIE G++   + + +      +  R D+L+ L +
Sbjct: 447 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 506

Query: 585 KM 587
           KM
Sbjct: 507 KM 507

[Close]

BLAST of IVF0016178 vs. ExPASy TrEMBL
Match: A0A5D3BDC8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001090 PE=4 SV=1)

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
           LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
           AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHSP 625
           WAEMMRKRVKRRNPTNFTNGDHSP
Sbjct: 601 WAEMMRKRVKRRNPTNFTNGDHSP 624

[Close]

BLAST of IVF0016178 vs. ExPASy TrEMBL
Match: A0A1S3BWC0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494147 PE=4 SV=1)

HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 616/624 (98.72%), Postives = 619/624 (99.20%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSLITLRRASNFSDFTAGIYNAGY IQRTMGRQGRRFRWKMRL GCSSVPLFSMFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFHSSHCQIPFILPYASSFSVPQEKLL VPPSRTIDFRNPLFPSLDLLARGYCDLNN
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGV+L+HDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILG+TRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
           LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
           AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDN YTVFIGGLISLGR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHSP 625
           WAEMMRKRVKRRNPTNF NGDHSP
Sbjct: 601 WAEMMRKRVKRRNPTNFINGDHSP 624

[Close]

BLAST of IVF0016178 vs. ExPASy TrEMBL
Match: A0A0A0LK05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1)

HSP 1 Score: 1175.6 bits (3040), Expect = 0.0e+00
Identity = 582/624 (93.27%), Postives = 598/624 (95.83%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MS+SLITL RASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMR+ GCSS+PLFSMFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLLIV   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGVKLSHD
Sbjct: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420

Query: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDNSYTVFIGGLISLG
Sbjct: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540

Query: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFTNGDHS 624
           RWAEMMRKRVKRRNPTNF N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINDDHS 620

[Close]

BLAST of IVF0016178 vs. ExPASy TrEMBL
Match: A0A6J1FBQ0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443968 PE=4 SV=1)

HSP 1 Score: 1065.1 bits (2753), Expect = 1.1e-307
Identity = 529/623 (84.91%), Postives = 562/623 (90.21%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSL T RR SNFS F   I NA   I+R++GR+GR FR KMR+  CSS+PL  MFDSR
Sbjct: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SH SFHSS CQIPFILP+ASSF VPQE +LI   SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           S SDSEIECE SEDDDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDECGV LSHDL
Sbjct: 121 SHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILGKTRQFETMVSLLEEMAE
Sbjct: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGL
Sbjct: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQ AGCRPD 
Sbjct: 361 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDT 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
            IYTCLITGFGNQ+RMDM+YG+LKEM+ NGCPPDGKTYN+LIKLMTN+RMPDDA RIY K
Sbjct: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIE+G +PTIHTY+MMMKSYFQTRNYEMGV  W+EMK+KGCCPDDNSYTVFIGGLIS GR
Sbjct: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           C EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHS 624
           WAEMMRKRVKRR PTN  N DHS
Sbjct: 601 WAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of IVF0016178 vs. ExPASy TrEMBL
Match: A0A6J1HPJ9 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465475 PE=4 SV=1)

HSP 1 Score: 1063.1 bits (2748), Expect = 4.3e-307
Identity = 528/623 (84.75%), Postives = 563/623 (90.37%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSL T RR SNFS F A I NA   IQR++GR+GR FR KMR+  CSS+PL  MFDSR
Sbjct: 1   MSLSL-TFRRFSNFSAFPATISNAACQIQRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SH SFHSS CQIPFILP+ASSF VPQE +LI   SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIAMSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           SDSDSEIE E  EDDDRE +SR +S EVDRVCKV+DELFALDRNMEAVLDECG+ LSHDL
Sbjct: 121 SDSDSEIEREIREDDDRESESRANSIEVDRVCKVLDELFALDRNMEAVLDECGIILSHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILGKTRQFETMVSLLEEMA 
Sbjct: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAA 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGL
Sbjct: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIK+FEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQ AGCRPD 
Sbjct: 361 LRCKKRSDAIKMFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQRAGCRPDA 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
            IYTCLITGFGNQ+RMDM+YG+LKEM+ NGCPPDGKTYN+LIKLMTN+RMPDDAVRIY K
Sbjct: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAVRIYNK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIE+G +PTIHTY+MMMKSYFQTRNYEMGV  W+EMK+KGCCPDDNSYTVFIGGLIS GR
Sbjct: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           C EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHS 624
           WAEMMRKRVKRR PTN  N DHS
Sbjct: 601 WAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of IVF0016178 vs. NCBI nr
Match: KAA0048071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1263 bits (3267), Expect = 0.0
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
           LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
           AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHSP 624
           WAEMMRKRVKRRNPTNFTNGDHSP
Sbjct: 601 WAEMMRKRVKRRNPTNFTNGDHSP 624

[Close]

BLAST of IVF0016178 vs. NCBI nr
Match: XP_008453445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1244 bits (3219), Expect = 0.0
Identity = 616/624 (98.72%), Postives = 619/624 (99.20%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSLITLRRASNFSDFTAGIYNAGY IQRTMGRQGRRFRWKMRL GCSSVPLFSMFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFHSSHCQIPFILPYASSFSVPQEKLL VPPSRTIDFRNPLFPSLDLLARGYCDLNN
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGV+L+HDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILG+TRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
           LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
           AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDN YTVFIGGLISLGR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHSP 624
           WAEMMRKRVKRRNPTNF NGDHSP
Sbjct: 601 WAEMMRKRVKRRNPTNFINGDHSP 624

[Close]

BLAST of IVF0016178 vs. NCBI nr
Match: XP_004144748.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sativus] >KGN61002.1 hypothetical protein Csa_021233 [Cucumis sativus])

HSP 1 Score: 1171 bits (3029), Expect = 0.0
Identity = 582/624 (93.27%), Postives = 598/624 (95.83%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MS+SLITL RASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMR+ GCSS+PLFSMFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLLIV   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGVKLSHD
Sbjct: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420

Query: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDNSYTVFIGGLISLG
Sbjct: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540

Query: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFTNGDHS 623
           RWAEMMRKRVKRRNPTNF N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINDDHS 620

[Close]

BLAST of IVF0016178 vs. NCBI nr
Match: XP_038890736.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1131 bits (2925), Expect = 0.0
Identity = 560/627 (89.31%), Postives = 590/627 (94.10%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSL+L TL RASNFS F A IYNAG+ IQRT+GR+G+RFRW+M + GCSS+PL  MFDSR
Sbjct: 1   MSLAL-TLGRASNFSPFAATIYNAGFRIQRTLGREGQRFRWQMHVPGCSSLPLSRMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SHRSFHSS+CQIPF+LP+ASS SVPQEK+L  P SRTI+FRN  FPSLDLLARG+CDLNN
Sbjct: 61  SHRSFHSSYCQIPFVLPHASSCSVPQEKVL-TPTSRTINFRNSTFPSLDLLARGFCDLNN 120

Query: 121 ----SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKL 180
               SD DSEIEC KSEDD REC+SRVDSTEVDRVCKVIDELFALDRNMEAVLDECG+KL
Sbjct: 121 EGSDSDYDSEIECGKSEDDYRECNSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGIKL 180

Query: 181 SHDLVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLE 240
           SHDLVLE+LAR+K+ARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLE
Sbjct: 181 SHDLVLEILARYKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLE 240

Query: 241 EMAEKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKL 300
           EMAEKELLTMETFTICFKAFAAAKERKKA+G+FE+MKKYKYKVGVETINCLLDSLGRAKL
Sbjct: 241 EMAEKELLTMETFTICFKAFAAAKERKKAIGIFEMMKKYKYKVGVETINCLLDSLGRAKL 300

Query: 301 GKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM 360
           GKEAL +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM
Sbjct: 301 GKEALAVFEKLRGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM 360

Query: 361 LEGLLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGC 420
           LEGLLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQG GC
Sbjct: 361 LEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGVGC 420

Query: 421 RPDVAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVR 480
           RPD  IYTCLITGFGNQKR+DMVYGLLKEM+ NGCPPDGKTYNALIKLMTNKRMPDDAVR
Sbjct: 421 RPDAGIYTCLITGFGNQKRLDMVYGLLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVR 480

Query: 481 IYKKMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLI 540
           IYKKMIENG EPTIHTY+MMMKSYFQTRNYEMGVA W+EMK+KGCCPDDNSYTVFIGGLI
Sbjct: 481 IYKKMIENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLI 540

Query: 541 SLGRCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASS 600
           S GRC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+
Sbjct: 541 SHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASN 600

Query: 601 VIARWAEMMRKRVKRRNPTNFTNGDHS 623
           VIARWAEMMRKRVKRRNPTN  NGDHS
Sbjct: 601 VIARWAEMMRKRVKRRNPTNIINGDHS 625

[Close]

BLAST of IVF0016178 vs. NCBI nr
Match: XP_022937612.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1060 bits (2741), Expect = 0.0
Identity = 529/623 (84.91%), Postives = 562/623 (90.21%), Query Frame = 0


Query: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60
           MSLSL T RR SNFS F   I NA   I+R++GR+GR FR KMR+  CSS+PL  MFDSR
Sbjct: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120
           SH SFHSS CQIPFILP+ASSF VPQE +LI   SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
           S SDSEIECE SEDDDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDECGV LSHDL
Sbjct: 121 SHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDL 180

Query: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILGKTRQFETMVSLLEEMAE
Sbjct: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGL
Sbjct: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420
           LRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQ AGCRPD 
Sbjct: 361 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDT 420

Query: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
            IYTCLITGFGNQ+RMDM+YG+LKEM+ NGCPPDGKTYN+LIKLMTN+RMPDDA RIY K
Sbjct: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNK 480

Query: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540
           MIE+G +PTIHTY+MMMKSYFQTRNYEMGV  W+EMK+KGCCPDDNSYTVFIGGLIS GR
Sbjct: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540

Query: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600
           C EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFTNGDHS 623
           WAEMMRKRVKRR PTN  N DHS
Sbjct: 601 WAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of IVF0016178 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 719.2 bits (1855), Expect = 2.9e-207
Identity = 345/492 (70.12%), Postives = 410/492 (83.33%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 104 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 163

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 223

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID+G KPDIVAHN MLEGL
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR +K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+ A RIY K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W EM +KG CPDDNSYTV I GLI  G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 584 WAQMTRRRFKQR 595

[Close]

BLAST of IVF0016178 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 716.8 bits (1849), Expect = 1.5e-206
Identity = 345/492 (70.12%), Postives = 409/492 (83.13%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 103 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 162

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 163 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 222

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 223 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 282

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G KPDIVAHN MLEGL
Sbjct: 283 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR  K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+   RIY K
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W+EM +KG CPDDNSYTV I GLIS G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 582

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 583 WAQMTRRRCKQR 594

[Close]

BLAST of IVF0016178 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 713.8 bits (1841), Expect = 1.2e-205
Identity = 344/492 (69.92%), Postives = 408/492 (82.93%), Query Frame = 0


Query: 122 DSDSEIECEKSEDDDREC-DSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 181
           D + E EC+  E+    C +S  +  EV+RVCKVIDELFALDRNMEAVLDE  + LSHDL
Sbjct: 104 DEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDL 163

Query: 182 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 241
           ++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM+IL KTRQFETMVS+LEEM  
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGT 223

Query: 242 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 301
           K LLTMETFTI  KAFAAAKERKKAVG+FELMKKYK+K+GVETINCLLDSLGRAKLGKEA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283

Query: 302 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 361
             +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G KPDIVAHN MLEGL
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343

Query: 362 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 421
           LR  K+SDAIKLF VMK+KGP P+V+SYTI++R+FCKQ+ M+ A+EYF++M  +G +PD 
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403

Query: 422 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 481
           A+YTCLITGFG QK++D VY LLKEM+  G PPDGKTYNALIKLM N++MP+   RIY K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463

Query: 482 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 541
           MI+N  EP+IHT++M+MKSYF  RNYEMG A W+EM +KG CPDDNSYTV I GLIS G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523

Query: 542 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 601
             EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ KFSGKF A+ + AR
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFAR 583

Query: 602 WAEMMRKRVKRR 613
           WA+M R+R K+R
Sbjct: 584 WAQMTRRRCKQR 595

[Close]

BLAST of IVF0016178 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 2.4e-68
Identity = 133/443 (30.02%), Postives = 244/443 (55.08%), Query Frame = 0


Query: 145 STEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQ 204
           S + +R+CK++ +    D  +E +L+E  VKLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 205 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 264
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 265 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKL-HGRFTPNLQTYTVLLN 324
           A+G F  M+++ +K+     N +LD+L +++   +A  +F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 325 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSP 384
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 385 DVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLL 444
               +  L+     + K+ +A+E+FE  + +G   +   Y  L+  +   +RM+  Y  +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 445 KEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQT 504
            EMR  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 505 RNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDY 564
              +M +  W+EMK KG  P  + ++  I  L    +  EA +Y  EM++ G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 565 NKFAADFSRAGRPDILEELAQKM 587
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of IVF0016178 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 3.2e-68
Identity = 134/422 (31.75%), Postives = 245/422 (58.06%), Query Frame = 0


Query: 165 MEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGK 224
           +++ LD+ G+++S ++V +VL RF+ A    +RFF W+ ++  + H  + Y+MM+    K
Sbjct: 87  LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146

Query: 225 TRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETI 284
            RQ++ M  L+  M +K++L +ETF I  + +A A++  +A+  F +M+KY     +   
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206

Query: 285 NCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE 344
           N LL +L ++K  ++A  +FE +  RFTP+ +TY++LL GW +  NL +A +++ +MID 
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266

Query: 345 GFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEA 404
           G  PDIV ++ M++ L +  +  +A+ +   M      P    Y++LV  +  + +++EA
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326

Query: 405 VEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKL 464
           V+ F EM+ +G + DVA++  LI  F    RM  VY +LKEM++ G  P+ K+ N +++ 
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386

Query: 465 MTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPD 524
           +  +   D+A  +++KMI+   EP   TY+M++K + + +  E     W  M++KG  P 
Sbjct: 387 LIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 446

Query: 525 DNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQ 584
            ++++V I GL       +A   LEEMIE G++   + + +      +  R D+L+ L +
Sbjct: 447 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 506

Query: 585 KM 587
           KM
Sbjct: 507 KM 507

The following BLAST results are available for this feature:

BLAST of IVF0016178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZP3	4.1e-206	70.12	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
Q9LEQ7	2.1e-205	70.12	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]
Q3EAF8	1.7e-204	69.92	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
Q9C9A2	3.4e-67	30.02	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9FVX2	4.5e-67	31.75	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]

BLAST of IVF0016178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDC8	0.0e+00	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BWC0	0.0e+00	98.72	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]
A0A0A0LK05	0.0e+00	93.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1	[more]
A0A6J1FBQ0	1.1e-307	84.91	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]
A0A6J1HPJ9	4.3e-307	84.75	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]

BLAST of IVF0016178 vs. NCBI nr


Match Name	Identity	Description
KAA0048071.1	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465...	[more]
XP_008453445.1	98.72	PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-...	[more]
XP_004144748.1	93.27	pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sa...	[more]
XP_038890736.1	89.31	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benin...	[more]
XP_022937612.1	84.91	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucur...	[more]

BLAST of IVF0016178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62470.1	2.9e-207	70.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14820.1	1.5e-206	70.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	1.2e-205	69.92	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	2.4e-68	30.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G77360.1	3.2e-68	31.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 387..420 e-value: 3.4E-8 score: 31.2 coord: 457..489 e-value: 4.0E-8 score: 31.0 coord: 214..241 e-value: 6.9E-5 score: 20.8 coord: 422..454 e-value: 1.6E-7 score: 29.1 coord: 491..524 e-value: 4.6E-9 score: 33.9 coord: 351..385 e-value: 1.2E-4 score: 20.0 coord: 317..350 e-value: 1.5E-7 score: 29.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 214..241 e-value: 0.0026 score: 17.9 coord: 284..308 e-value: 0.23 score: 11.8 coord: 317..346 e-value: 3.2E-4 score: 20.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 348..397 e-value: 1.2E-13 score: 51.0 coord: 496..535 e-value: 4.7E-8 score: 33.1 coord: 418..463 e-value: 1.7E-11 score: 44.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 419..453 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 489..523 score: 10.851745
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 211..245 score: 9.514466
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 454..488 score: 12.167101
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 349..383 score: 10.807899
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 384..418 score: 12.517862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..348 score: 11.816339
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 524..558 score: 9.119859
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 310..446 e-value: 7.0E-39 score: 136.0 coord: 447..621 e-value: 8.5E-33 score: 116.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 161..309 e-value: 1.8E-17 score: 65.8
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 41..617
None	No IPR available	PANTHER	PTHR47942:SF48	OS05G0355200 PROTEIN	coord: 41..617
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 298..515

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016178.1	IVF0016178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding