IVF0016163 (gene) Melon (IVF77) v1

Overview


Name	IVF0016163
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr05: 1051436 .. 1053316 (+)
RNA-Seq Expression	IVF0016163
Synteny	IVF0016163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGAGAAATATAGTGAGTTGGAATGCAATAATAACCGGATTTCTTAATGTTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGATAGAAGGTATAAAGTTTGATGCTGTTACCATGTTGGTGGTAATTCAAGCATGTGCAGAATACGGATGTCTCCGATTAGGCATGCAACTGCACCAGTTGGCTATCAAGTTCAATTTGATTAATGACGTGTTTGTATTAAATGCACTATTGAATATGTATAGTGATAACGGAAGTTTGGAATCATCATGTGTGTTATTCAATGCTGTTCCCACCTCTGATGCTGCTTTATGGAATTCCATGATATCTTGTTACATTGGTTTTGGATTTCATGCTGAAGCTATAGCTTTGTTTATTAAAATGCGGTTGGAACGCATAAAAGAAGATGTTAGAACCATTGTGATTATGTTATCTTTATGCAATGATCTAAATGATGGTTCACTATGGGGTAGAGGCTTACATGCTCATGCCATGAAAAGTGGAATAGAACTAGATGCATTTCTGGGCAATGCGTTGTTAAGCATGTATGTCAAGCACAATCAAATAAATGCCGCACAGAATGTTTTTGAAAAGACGAGAGGTTTGGATGTCATCTCATGGAACACAATGATATCAGCACTTGCTCAGAGTATGTTTCGAGCAAAAGCATTTGAACTCTTTTTTATGATGTGTGAATCAGAAATCAAGTTTAATTCTTACACGATAATTTCTCTCCTCGCATTGTGTAAAGATGGAAATGATTTAGTGTTTGGGAGATCGATCCATGGTTTTGCAATAAAAAATGGTCTCGAAATAAATACTTCTTTGAACACTTCACTTACTGAAATGTACATCAATTGTGGTGATGAAAGAGCAGCTATAGATATGTTTACTAGATGTCCTCAAAGAGATTTAATCTCATGGAATTCCCTAATTTTAAGTTATATAAAGAATGACAATGCAGGGAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCGAACTCTGTGACAATCATAAACATCCTCACGTCTTGTACACAGCTTGCTCATCTACCACTAGGACAGTGCTTGCATGCTTACGCAACCAGAAGGGAAGAATCTCTTGAAATGGATGCTTCTCTGGCAAATGCTTTTATAACTATGTATGCACGATGCGGTAAAATGCAATATGCAGAACAGATTTTTCGCACCCTGCAGACAAGAAATATTGTCTCATGGAATGCCATGATAACAGGATATGGAATGCACGGTCGCGGACGCGATGCCACTCTAGCATTTGCTCAGATGTTGGATGATGGTTTCAAGCCTAACAATGTATCTTTTGCATCTGTTTTATCTGCCTGCAGCCATTCTGGTTTGACTGAGACAGGTTTGCTACTCTTCCATTCGATGGTGCGGGATTTTGGTCTTGCTCCTCAACTTACTCACTATGGTTGTATGGTCGATCTGCTTGGTCGTGGGGGCCATTTTTCTGAAGCTATAGCTTTCATCAACACAATGCCCATTGAACCTGATGCATCAATTTGGAGAGCTTTGCTGAGTTCATGGCAGATTAAAAGCAATAAAAAGCTATTGGAGACCATCTTTGGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGCAATTTTATTTTGCTTTCCAATATTTATGCAGCAGCAGGCCTTTGGTCAGAAGTTGTACAGATAAGAAAGTGGCTTCGAGAAAGAGGTCTAGGAAAGCCTCCAGGAACTAGCTGGATTGTAATTGGCAATCAGGTTCACTATTTCACTGCTACTGATGTATTACACCCTCAATCAGAAAAAATTTACGAAAATTTGAATTCTTTGACATCATTGATTCAAGATATGGGCTGA

mRNA sequence

ATGGTGGTGAGAAATATAGTGAGTTGGAATGCAATAATAACCGGATTTCTTAATGTTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGATAGAAGGTATAAAGTTTGATGCTGTTACCATGTTGGTGGTAATTCAAGCATGTGCAGAATACGGATGTCTCCGATTAGGCATGCAACTGCACCAGTTGGCTATCAAGTTCAATTTGATTAATGACGTGTTTGTATTAAATGCACTATTGAATATGTATAGTGATAACGGAAGTTTGGAATCATCATGTGTGTTATTCAATGCTGTTCCCACCTCTGATGCTGCTTTATGGAATTCCATGATATCTTGTTACATTGGTTTTGGATTTCATGCTGAAGCTATAGCTTTGTTTATTAAAATGCGATGTCCTCAAAGAGATTTAATCTCATGGAATTCCCTAATTTTAAGTTATATAAAGAATGACAATGCAGGGAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCGAACTCTGTGACAATCATAAACATCCTCACGTCTTGTACACAGCTTGCTCATCTACCACTAGGACAGTGCTTGCATGCTTACGCAACCAGAAGGGAAGAATCTCTTGAAATGGATGCTTCTCTGGCAAATGCTTTTATAACTATGTATGCACGATGCGGTAAAATGCAATATGCAGAACAGATTTTTCGCACCCTGCAGACAAGAAATATTGTCTCATGGAATGCCATGATAACAGGATATGGAATGCACGGTCGCGGACGCGATGCCACTCTAGCATTTGCTCAGATGTTGGATGATGGTTTCAAGCCTAACAATGTATCTTTTGCATCTGTTTTATCTGCCTGCAGCCATTCTGGTTTGACTGAGACAGGTTTGCTACTCTTCCATTCGATGGTGCGGGATTTTGGTCTTGCTCCTCAACTTACTCACTATGGTTGTATGGTCGATCTGCTTGGTCGTGGGGGCCATTTTTCTGAAGCTATAGCTTTCATCAACACAATGCCCATTGAACCTGATGCATCAATTTGGAGAGCTTTGCTGAGTTCATGGCAGATTAAAAGCAATAAAAAGCTATTGGAGACCATCTTTGGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGCAATTTTATTTTGCTTTCCAATATTTATGCAGCAGCAGGCCTTTGGTCAGAAGTTGTACAGATAAGAAAGTGGCTTCGAGAAAGAGGTCTAGGAAAGCCTCCAGGAACTAGCTGGATTGTAATTGGCAATCAGGTTCACTATTTCACTGCTACTGATGTATTACACCCTCAATCAGAAAAAATTTACGAAAATTTGAATTCTTTGACATCATTGATTCAAGATATGGGCTGA

Coding sequence (CDS)

ATGGTGGTGAGAAATATAGTGAGTTGGAATGCAATAATAACCGGATTTCTTAATGTTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGATAGAAGGTATAAAGTTTGATGCTGTTACCATGTTGGTGGTAATTCAAGCATGTGCAGAATACGGATGTCTCCGATTAGGCATGCAACTGCACCAGTTGGCTATCAAGTTCAATTTGATTAATGACGTGTTTGTATTAAATGCACTATTGAATATGTATAGTGATAACGGAAGTTTGGAATCATCATGTGTGTTATTCAATGCTGTTCCCACCTCTGATGCTGCTTTATGGAATTCCATGATATCTTGTTACATTGGTTTTGGATTTCATGCTGAAGCTATAGCTTTGTTTATTAAAATGCGATGTCCTCAAAGAGATTTAATCTCATGGAATTCCCTAATTTTAAGTTATATAAAGAATGACAATGCAGGGAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCGAACTCTGTGACAATCATAAACATCCTCACGTCTTGTACACAGCTTGCTCATCTACCACTAGGACAGTGCTTGCATGCTTACGCAACCAGAAGGGAAGAATCTCTTGAAATGGATGCTTCTCTGGCAAATGCTTTTATAACTATGTATGCACGATGCGGTAAAATGCAATATGCAGAACAGATTTTTCGCACCCTGCAGACAAGAAATATTGTCTCATGGAATGCCATGATAACAGGATATGGAATGCACGGTCGCGGACGCGATGCCACTCTAGCATTTGCTCAGATGTTGGATGATGGTTTCAAGCCTAACAATGTATCTTTTGCATCTGTTTTATCTGCCTGCAGCCATTCTGGTTTGACTGAGACAGGTTTGCTACTCTTCCATTCGATGGTGCGGGATTTTGGTCTTGCTCCTCAACTTACTCACTATGGTTGTATGGTCGATCTGCTTGGTCGTGGGGGCCATTTTTCTGAAGCTATAGCTTTCATCAACACAATGCCCATTGAACCTGATGCATCAATTTGGAGAGCTTTGCTGAGTTCATGGCAGATTAAAAGCAATAAAAAGCTATTGGAGACCATCTTTGGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGCAATTTTATTTTGCTTTCCAATATTTATGCAGCAGCAGGCCTTTGGTCAGAAGTTGTACAGATAAGAAAGTGGCTTCGAGAAAGAGGTCTAGGAAAGCCTCCAGGAACTAGCTGGATTGTAATTGGCAATCAGGTTCACTATTTCACTGCTACTGATGTATTACACCCTCAATCAGAAAAAATTTACGAAAATTTGAATTCTTTGACATCATTGATTCAAGATATGGGCTGA

Protein sequence

MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG

Homology

[Close]

BLAST of IVF0016163 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.5e-92
Identity = 172/455 (37.80%), Postives = 272/455 (59.78%), Query Frame = 0


Query: 3   VRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 62
           V+++VSWNA+I+G+   G+Y +AL+LF  M+   ++ D  TM+ V+ ACA+ G + LG Q
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287

Query: 63  LHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 122
           +H         +++ ++NAL+++YS  G LE++C LF                       
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE---------------------- 347

Query: 123 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELE-PNSVTIINIL 182
                      R P +D+ISWN+LI  Y   +   +ALLLF  M+   E PN VT+++IL
Sbjct: 348 -----------RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 407

Query: 183 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 242
            +C  L  + +G+ +H Y  +R + +   +SL  + I MYA+CG ++ A Q+F ++  ++
Sbjct: 408 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 467

Query: 243 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 302
           + SWNAMI G+ MHGR   +   F++M   G +P++++F  +LSACSHSG+ + G  +F 
Sbjct: 468 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 527

Query: 303 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 362
           +M +D+ + P+L HYGCM+DLLG  G F EA   IN M +EPD  IW +LL + ++  N 
Sbjct: 528 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 587

Query: 363 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 422
           +L E+    L+++EP NPG+++LLSNIYA+AG W+EV + R  L ++G+ K PG S I I
Sbjct: 588 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 647

Query: 423 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
            + VH F   D  HP++ +IY  L  +  L++  G
Sbjct: 648 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

[Close]

BLAST of IVF0016163 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 8.0e-90
Identity = 171/456 (37.50%), Postives = 275/456 (60.31%), Query Frame = 0


Query: 4   RNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 63
           +++VSWN++I GF+  G   KAL+LF  M  E +K   VTM+ V+ ACA+   L  G Q+
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254

Query: 64  HQLAIKFNLIN-DVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 123
               I+ N +N ++ + NA+L+MY+  GS+E +  LF+A+   D   W +M+  Y     
Sbjct: 255 CSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 314

Query: 124 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFN--HMISELEPNSVTIINI 183
           +  A  +   M  PQ+D+++WN+LI +Y +N    +AL++F+   +   ++ N +T+++ 
Sbjct: 315 YEAAREVLNSM--PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 374

Query: 184 LTSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTR 243
           L++C Q+  L LG+ +H+Y   ++  + M+  + +A I MY++CG ++ + ++F +++ R
Sbjct: 375 LSACAQVGALELGRWIHSYI--KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 434

Query: 244 NIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLF 303
           ++  W+AMI G  MHG G +A   F +M +   KPN V+F +V  ACSH+GL +    LF
Sbjct: 435 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 494

Query: 304 HSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSN 363
           H M  ++G+ P+  HY C+VD+LGR G+  +A+ FI  MPI P  S+W ALL + +I +N
Sbjct: 495 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 554

Query: 364 KKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 423
             L E    +L+ELEP N G  +LLSNIYA  G W  V ++RK +R  GL K PG S I 
Sbjct: 555 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 614

Query: 424 IGNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
           I   +H F + D  HP SEK+Y  L+ +   ++  G
Sbjct: 615 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645

[Close]

BLAST of IVF0016163 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 8.3e-87
Identity = 174/451 (38.58%), Postives = 263/451 (58.31%), Query Frame = 0


Query: 4   RNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 63
           RN+VSWN++IT F   G   +AL +F  ML   ++ D VT+  VI ACA    +++G ++
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275

Query: 64  HQLAIKFN-LINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 123
           H   +K + L ND+ + NA ++MY+    ++ +  +F+++P  +     SMIS Y     
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335

Query: 124 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISE-LEPNSVTIINIL 183
              A  +F KM   +R+++SWN+LI  Y +N    +AL LF  +  E + P   +  NIL
Sbjct: 336 TKAARLMFTKM--AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 395

Query: 184 TSCTQLAHLPLGQCLHAYATRR----EESLEMDASLANAFITMYARCGKMQYAEQIFRTL 243
            +C  LA L LG   H +  +     +   E D  + N+ I MY +CG ++    +FR +
Sbjct: 396 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 455

Query: 244 QTRNIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGL 303
             R+ VSWNAMI G+  +G G +A   F +ML+ G KP++++   VLSAC H+G  E G 
Sbjct: 456 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 515

Query: 304 LLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQI 363
             F SM RDFG+AP   HY CMVDLLGR G   EA + I  MP++PD+ IW +LL++ ++
Sbjct: 516 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 575

Query: 364 KSNKKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTS 423
             N  L + +  KL+E+EPSN G ++LLSN+YA  G W +V+ +RK +R+ G+ K PG S
Sbjct: 576 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 635

Query: 424 WIVIGNQVHYFTATDVLHPQSEKIYENLNSL 449
           WI I    H F   D  HP+ ++I+  L+ L
Sbjct: 636 WIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664

[Close]

BLAST of IVF0016163 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.5e-85
Identity = 163/449 (36.30%), Postives = 265/449 (59.02%), Query Frame = 0


Query: 9   WNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 68
           WN +I GF    +  ++L L+  ML      +A T   +++AC+         Q+H    
Sbjct: 83  WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142

Query: 69  KFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIA 128
           K    NDV+ +N+L+N Y+  G+ + + +LF+ +P  D   WNS+I  Y+  G    A+ 
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202

Query: 129 LFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQL 188
           LF KM   +++ ISW ++I  Y++ D   +AL LF+ M  S++EP++V++ N L++C QL
Sbjct: 203 LFRKM--AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 262

Query: 189 AHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNA 248
             L  G+ +H+Y  +    + MD+ L    I MYA+CG+M+ A ++F+ ++ +++ +W A
Sbjct: 263 GALEQGKWIHSYLNKTR--IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 322

Query: 249 MITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDF 308
           +I+GY  HG GR+A   F +M   G KPN ++F +VL+ACS++GL E G L+F+SM RD+
Sbjct: 323 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 382

Query: 309 GLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETI 368
            L P + HYGC+VDLLGR G   EA  FI  MP++P+A IW ALL + +I  N +L E I
Sbjct: 383 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 442

Query: 369 FGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHY 428
              L+ ++P + G ++  +NI+A    W +  + R+ ++E+G+ K PG S I +    H 
Sbjct: 443 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 502

Query: 429 FTATDVLHPQSEKIYENLNSLTSLIQDMG 457
           F A D  HP+ EKI      +   +++ G
Sbjct: 503 FLAGDRSHPEIEKIQSKWRIMRRKLEENG 527

[Close]

BLAST of IVF0016163 vs. ExPASy Swiss-Prot
Match: Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 310.8 bits (795), Expect = 2.5e-83
Identity = 165/455 (36.26%), Postives = 264/455 (58.02%), Query Frame = 0


Query: 5   NIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLH 64
           NIVSWN I++GF   G + +A+ +F  +   G   D VT+  V+ +  +   L +G  +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 65  QLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHA 124
              IK  L+ D  V++A+++MY  +G +     LFN     +A + N+ I+     G   
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 125 EAIALF--IKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHM-ISELEPNSVTIINIL 184
           +A+ +F   K +  + +++SW S+I    +N    +AL LF  M ++ ++PN VTI ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 185 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 244
            +C  +A L  G+  H +A R    L  +  + +A I MYA+CG++  ++ +F  + T+N
Sbjct: 396 PACGNIAALGHGRSTHGFAVR--VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 455

Query: 245 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 304
           +V WN+++ G+ MHG+ ++    F  ++    KP+ +SF S+LSAC   GLT+ G   F 
Sbjct: 456 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 515

Query: 305 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 364
            M  ++G+ P+L HY CMV+LLGR G   EA   I  MP EPD+ +W ALL+S ++++N 
Sbjct: 516 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 575

Query: 365 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 424
            L E    KL  LEP NPG ++LLSNIYAA G+W+EV  IR  +   GL K PG SWI +
Sbjct: 576 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 635

Query: 425 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
            N+V+   A D  HPQ ++I E ++ ++  ++  G
Sbjct: 636 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668

[Close]

BLAST of IVF0016163 vs. ExPASy TrEMBL
Match: A0A5A7TDA1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00610 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 222 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 282 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 341

Query: 121 GFHAEAIALFIKM----------------------------------------------- 180
           GFHAEAIALFIKM                                               
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAFL 401

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 402 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 461

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 462 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 521

Query: 301 ---RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
              RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 522 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 581

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 582 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 641

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 457
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 701

[Close]

BLAST of IVF0016163 vs. ExPASy TrEMBL
Match: A0A5D3BD37 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001060 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 222 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 282 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 341

Query: 121 GFHAEAIALFIKM----------------------------------------------- 180
           GFHAEAIALFIKM                                               
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFL 401

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 402 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 461

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 462 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 521

Query: 301 ---RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
              RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 522 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 581

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 582 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 641

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 457
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 701

[Close]

BLAST of IVF0016163 vs. ExPASy TrEMBL
Match: A0A1S4DXL9 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 102 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 161

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 162 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 221

Query: 121 GFHAEAIALFIKM----------------------------------------------- 180
           GFHAEAIALFIKM                                               
Sbjct: 222 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFL 281

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 282 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 341

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 342 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 401

Query: 301 ---RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
              RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 402 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 461

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 462 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 521

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 457
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 522 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 581

[Close]

BLAST of IVF0016163 vs. ExPASy TrEMBL
Match: A0A1S3BNK9 (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 222 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 282 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 341

Query: 121 GFHAEAIALFIKM----------------------------------------------- 180
           GFHAEAIALFIKM                                               
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFL 401

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 402 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 461

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 462 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 521

Query: 301 ---RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
              RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 522 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 581

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 582 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 641

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 457
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 701

[Close]

BLAST of IVF0016163 vs. ExPASy TrEMBL
Match: A0A6J1FWX3 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448981 PE=4 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 5.0e-212
Identity = 400/626 (63.90%), Postives = 428/626 (68.37%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           M VRN+VSWNA+ITG+LN+GDYTKALKLFSSML EGIKFDAVTML+VIQACAE   L+LG
Sbjct: 220 MEVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLG 279

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFN I D+FVLNALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI F
Sbjct: 280 MQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAF 339

Query: 121 GFHAEAIALFIKM----------------------------------------------- 180
           GFHAEAIAL+IKM                                               
Sbjct: 340 GFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFL 399

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 400 GNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEI 459

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 460 KFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATN 519

Query: 301 ---RCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
              RCPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHL
Sbjct: 520 LFIRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHL 579

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAY TRR ES E+DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMIT
Sbjct: 580 PLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMIT 639

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 457
           GYGMHGRG DATLAFAQMLDDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+A
Sbjct: 640 GYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIA 699

[Close]

BLAST of IVF0016163 vs. NCBI nr
Match: XP_016900722.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 843 bits (2179), Expect = 4.24e-303
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 102 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 161

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 162 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 221

Query: 121 GFHAEAIALFIKMR---------------------------------------------- 180
           GFHAEAIALFIKMR                                              
Sbjct: 222 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFL 281

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 282 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 341

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 342 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 401

Query: 301 ----CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
               CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 402 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 461

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 462 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 521

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 456
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 522 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 581

[Close]

BLAST of IVF0016163 vs. NCBI nr
Match: XP_008449715.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucumis melo] >TYJ96138.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 843 bits (2179), Expect = 2.90e-301
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 222 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 282 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 341

Query: 121 GFHAEAIALFIKMR---------------------------------------------- 180
           GFHAEAIALFIKMR                                              
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFL 401

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 402 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 461

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 462 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 521

Query: 301 ----CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
               CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 522 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 581

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 582 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 641

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 456
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 701

[Close]

BLAST of IVF0016163 vs. NCBI nr
Match: KAA0041414.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 843 bits (2179), Expect = 2.90e-301
Identity = 456/626 (72.84%), Postives = 456/626 (72.84%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 222 MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF
Sbjct: 282 MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 341

Query: 121 GFHAEAIALFIKMR---------------------------------------------- 180
           GFHAEAIALFIKMR                                              
Sbjct: 342 GFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAFL 401

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 402 GNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEI 461

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 462 KFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAID 521

Query: 301 ----CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
               CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 522 MFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 581

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT
Sbjct: 582 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 641

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 456
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 701

[Close]

BLAST of IVF0016163 vs. NCBI nr
Match: KAE8649514.1 (hypothetical protein Csa_017924 [Cucumis sativus])

HSP 1 Score: 790 bits (2040), Expect = 1.90e-282
Identity = 429/626 (68.53%), Postives = 443/626 (70.77%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           M+VRNIVSWNAIITGFLNVGD  KALKL+SSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 71  MLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 130

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS  LFNAVPTSDAALWNSMIS YIGF
Sbjct: 131 MQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGF 190

Query: 121 GFHAEAIALFIKMR---------------------------------------------- 180
           GFHAEAIALFIKMR                                              
Sbjct: 191 GFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYL 250

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 251 GNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEI 310

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 311 KFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATN 370

Query: 301 ----CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
               CPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 371 MFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 430

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR+IVSWNAMIT
Sbjct: 431 PLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMIT 490

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 456
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LFHSMVRDFG+A
Sbjct: 491 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIA 550

[Close]

BLAST of IVF0016163 vs. NCBI nr
Match: XP_031740689.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 790 bits (2040), Expect = 5.70e-282
Identity = 429/626 (68.53%), Postives = 443/626 (70.77%), Query Frame = 0


Query: 1   MVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 60
           M+VRNIVSWNAIITGFLNVGD  KALKL+SSMLIEGIKFDAVTMLVVIQACAEYGCLRLG
Sbjct: 102 MLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 161

Query: 61  MQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGF 120
           MQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS  LFNAVPTSDAALWNSMIS YIGF
Sbjct: 162 MQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGF 221

Query: 121 GFHAEAIALFIKMR---------------------------------------------- 180
           GFHAEAIALFIKMR                                              
Sbjct: 222 GFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYL 281

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 282 GNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEI 341

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 342 KFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATN 401

Query: 301 ----CPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 360
               CPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL
Sbjct: 402 MFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHL 461

Query: 361 PLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMIT 420
           PLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR+IVSWNAMIT
Sbjct: 462 PLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMIT 521

Query: 421 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLA 456
           GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LFHSMVRDFG+A
Sbjct: 522 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIA 581

[Close]

BLAST of IVF0016163 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 4.6e-93
Identity = 172/455 (37.80%), Postives = 272/455 (59.78%), Query Frame = 0


Query: 3   VRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 62
           V+++VSWNA+I+G+   G+Y +AL+LF  M+   ++ D  TM+ V+ ACA+ G + LG Q
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287

Query: 63  LHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 122
           +H         +++ ++NAL+++YS  G LE++C LF                       
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE---------------------- 347

Query: 123 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELE-PNSVTIINIL 182
                      R P +D+ISWN+LI  Y   +   +ALLLF  M+   E PN VT+++IL
Sbjct: 348 -----------RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 407

Query: 183 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 242
            +C  L  + +G+ +H Y  +R + +   +SL  + I MYA+CG ++ A Q+F ++  ++
Sbjct: 408 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 467

Query: 243 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 302
           + SWNAMI G+ MHGR   +   F++M   G +P++++F  +LSACSHSG+ + G  +F 
Sbjct: 468 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 527

Query: 303 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 362
           +M +D+ + P+L HYGCM+DLLG  G F EA   IN M +EPD  IW +LL + ++  N 
Sbjct: 528 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 587

Query: 363 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 422
           +L E+    L+++EP NPG+++LLSNIYA+AG W+EV + R  L ++G+ K PG S I I
Sbjct: 588 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 647

Query: 423 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
            + VH F   D  HP++ +IY  L  +  L++  G
Sbjct: 648 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

[Close]

BLAST of IVF0016163 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 332.4 bits (851), Expect = 5.7e-91
Identity = 171/456 (37.50%), Postives = 275/456 (60.31%), Query Frame = 0


Query: 4   RNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 63
           +++VSWN++I GF+  G   KAL+LF  M  E +K   VTM+ V+ ACA+   L  G Q+
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254

Query: 64  HQLAIKFNLIN-DVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 123
               I+ N +N ++ + NA+L+MY+  GS+E +  LF+A+   D   W +M+  Y     
Sbjct: 255 CSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 314

Query: 124 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFN--HMISELEPNSVTIINI 183
           +  A  +   M  PQ+D+++WN+LI +Y +N    +AL++F+   +   ++ N +T+++ 
Sbjct: 315 YEAAREVLNSM--PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 374

Query: 184 LTSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTR 243
           L++C Q+  L LG+ +H+Y   ++  + M+  + +A I MY++CG ++ + ++F +++ R
Sbjct: 375 LSACAQVGALELGRWIHSYI--KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 434

Query: 244 NIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLF 303
           ++  W+AMI G  MHG G +A   F +M +   KPN V+F +V  ACSH+GL +    LF
Sbjct: 435 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 494

Query: 304 HSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSN 363
           H M  ++G+ P+  HY C+VD+LGR G+  +A+ FI  MPI P  S+W ALL + +I +N
Sbjct: 495 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 554

Query: 364 KKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 423
             L E    +L+ELEP N G  +LLSNIYA  G W  V ++RK +R  GL K PG S I 
Sbjct: 555 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 614

Query: 424 IGNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
           I   +H F + D  HP SEK+Y  L+ +   ++  G
Sbjct: 615 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645

[Close]

BLAST of IVF0016163 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 322.4 bits (825), Expect = 5.9e-88
Identity = 174/451 (38.58%), Postives = 263/451 (58.31%), Query Frame = 0


Query: 4   RNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 63
           RN+VSWN++IT F   G   +AL +F  ML   ++ D VT+  VI ACA    +++G ++
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275

Query: 64  HQLAIKFN-LINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGF 123
           H   +K + L ND+ + NA ++MY+    ++ +  +F+++P  +     SMIS Y     
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335

Query: 124 HAEAIALFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISE-LEPNSVTIINIL 183
              A  +F KM   +R+++SWN+LI  Y +N    +AL LF  +  E + P   +  NIL
Sbjct: 336 TKAARLMFTKM--AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 395

Query: 184 TSCTQLAHLPLGQCLHAYATRR----EESLEMDASLANAFITMYARCGKMQYAEQIFRTL 243
            +C  LA L LG   H +  +     +   E D  + N+ I MY +CG ++    +FR +
Sbjct: 396 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 455

Query: 244 QTRNIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGL 303
             R+ VSWNAMI G+  +G G +A   F +ML+ G KP++++   VLSAC H+G  E G 
Sbjct: 456 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 515

Query: 304 LLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQI 363
             F SM RDFG+AP   HY CMVDLLGR G   EA + I  MP++PD+ IW +LL++ ++
Sbjct: 516 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 575

Query: 364 KSNKKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTS 423
             N  L + +  KL+E+EPSN G ++LLSN+YA  G W +V+ +RK +R+ G+ K PG S
Sbjct: 576 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 635

Query: 424 WIVIGNQVHYFTATDVLHPQSEKIYENLNSL 449
           WI I    H F   D  HP+ ++I+  L+ L
Sbjct: 636 WIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664

[Close]

BLAST of IVF0016163 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 316.6 bits (810), Expect = 3.2e-86
Identity = 163/449 (36.30%), Postives = 265/449 (59.02%), Query Frame = 0


Query: 9   WNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 68
           WN +I GF    +  ++L L+  ML      +A T   +++AC+         Q+H    
Sbjct: 83  WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142

Query: 69  KFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIA 128
           K    NDV+ +N+L+N Y+  G+ + + +LF+ +P  D   WNS+I  Y+  G    A+ 
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202

Query: 129 LFIKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQL 188
           LF KM   +++ ISW ++I  Y++ D   +AL LF+ M  S++EP++V++ N L++C QL
Sbjct: 203 LFRKM--AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 262

Query: 189 AHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNA 248
             L  G+ +H+Y  +    + MD+ L    I MYA+CG+M+ A ++F+ ++ +++ +W A
Sbjct: 263 GALEQGKWIHSYLNKTR--IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 322

Query: 249 MITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDF 308
           +I+GY  HG GR+A   F +M   G KPN ++F +VL+ACS++GL E G L+F+SM RD+
Sbjct: 323 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 382

Query: 309 GLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETI 368
            L P + HYGC+VDLLGR G   EA  FI  MP++P+A IW ALL + +I  N +L E I
Sbjct: 383 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 442

Query: 369 FGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHY 428
              L+ ++P + G ++  +NI+A    W +  + R+ ++E+G+ K PG S I +    H 
Sbjct: 443 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 502

Query: 429 FTATDVLHPQSEKIYENLNSLTSLIQDMG 457
           F A D  HP+ EKI      +   +++ G
Sbjct: 503 FLAGDRSHPEIEKIQSKWRIMRRKLEENG 527

[Close]

BLAST of IVF0016163 vs. TAIR 10
Match: AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-84
Identity = 165/455 (36.26%), Postives = 264/455 (58.02%), Query Frame = 0


Query: 5   NIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLH 64
           NIVSWN I++GF   G + +A+ +F  +   G   D VT+  V+ +  +   L +G  +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 65  QLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHA 124
              IK  L+ D  V++A+++MY  +G +     LFN     +A + N+ I+     G   
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 125 EAIALF--IKMRCPQRDLISWNSLILSYIKNDNAGKALLLFNHM-ISELEPNSVTIINIL 184
           +A+ +F   K +  + +++SW S+I    +N    +AL LF  M ++ ++PN VTI ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 185 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 244
            +C  +A L  G+  H +A R    L  +  + +A I MYA+CG++  ++ +F  + T+N
Sbjct: 396 PACGNIAALGHGRSTHGFAVR--VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 455

Query: 245 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 304
           +V WN+++ G+ MHG+ ++    F  ++    KP+ +SF S+LSAC   GLT+ G   F 
Sbjct: 456 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 515

Query: 305 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 364
            M  ++G+ P+L HY CMV+LLGR G   EA   I  MP EPD+ +W ALL+S ++++N 
Sbjct: 516 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 575

Query: 365 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 424
            L E    KL  LEP NPG ++LLSNIYAA G+W+EV  IR  +   GL K PG SWI +
Sbjct: 576 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 635

Query: 425 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 457
            N+V+   A D  HPQ ++I E ++ ++  ++  G
Sbjct: 636 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668

The following BLAST results are available for this feature:

BLAST of IVF0016163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	6.5e-92	37.80	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	8.0e-90	37.50	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9SIT7	8.3e-87	38.58	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	4.5e-85	36.30	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9LNU6	2.5e-83	36.26	Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0016163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDA1	1.6e-242	72.84	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BD37	1.6e-242	72.84	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DXL9	1.6e-242	72.84	pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isofor...	[more]
A0A1S3BNK9	1.6e-242	72.84	pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis...	[more]
A0A6J1FWX3	5.0e-212	63.90	pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like OS=Cuc...	[more]

BLAST of IVF0016163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900722.1	4.24e-303	72.84	PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-...	[more]
XP_008449715.1	2.90e-301	72.84	PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1...	[more]
KAA0041414.1	2.90e-301	72.84	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAE8649514.1	1.90e-282	68.53	hypothetical protein Csa_017924 [Cucumis sativus]	[more]
XP_031740689.1	5.70e-282	68.53	pentatricopeptide repeat-containing protein At3g57430, chloroplastic isoform X2 ...	[more]

BLAST of IVF0016163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	4.6e-93	37.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	5.7e-91	37.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	5.9e-88	38.58	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	3.2e-86	36.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G20230.1	1.8e-84	36.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 292..442 e-value: 3.2E-11 score: 44.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 192..291 e-value: 7.1E-23 score: 82.9 coord: 94..191 e-value: 9.2E-15 score: 56.4 coord: 1..93 e-value: 2.4E-16 score: 61.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 110..134 e-value: 6.4E-4 score: 19.8 coord: 141..168 e-value: 3.4E-4 score: 20.7 coord: 315..339 e-value: 1.2 score: 9.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 7..40 e-value: 1.4E-6 score: 26.0 coord: 141..168 e-value: 0.0016 score: 16.5 coord: 243..276 e-value: 4.5E-7 score: 27.6 coord: 278..311 e-value: 0.003 score: 15.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 4..52 e-value: 1.2E-11 score: 44.6 coord: 240..288 e-value: 1.4E-9 score: 38.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 241..275 score: 11.366925
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 5..39 score: 10.654441
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 4..133
None	No IPR available	PANTHER	PTHR47929:SF21	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 137..434
None	No IPR available	PANTHER	PTHR47929:SF21	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 4..133
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 137..434

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0016163.1	IVF0016163.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding