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IVF0016036 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAGAGAAGTATATGTTATTATTATTATATTATAGTAGTAAAATGACAAATGAATGTACAAAGGGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTTAGAGCAGAAGCTCTCTCCCTCCCTTCTCCATAACAACAATGTCCTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACTAGAAACCCTTCTTCTTCTTCTTCCTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATCTCAGGTGGTTCAGCTACTGTTGCTGTAGAAACCCCCGTCGAGCAGAAGGATCCGGAGCCGGCCGAGGAGAGCCTTGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGGTAACCTTCATTATGAGAAATGAAACATTAAACTATTTTGTTCTTTTAAGGGGGAACCCTAAATTCTCTGTTTATTTTGCTTCTAATTGCATAGCTAAATCTAGGTGTATAATGGGGGTACATTGGAAATTGACAAATAGATACATGCAATGCCGGAAATGCATTTTTAGGGGAGATCTGGAGTCTGCAAGTTTTGATGATGTTCAAATTGTAATGTTATTTCTTGGTTGTGCTTGAGAATTTACTTGATCTTTCATCAGAGGCTAGGAGGAGGAAGTGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGTATAATATTAACATGTTTATATGATTCTTTTGTCACGCTTTCTTAAAGCTTGTGCGAGTGAAATAAGGTCAAGACATTGTGTATGCATCTTTTCCAAAACGATCTTAGCTAAGTAGTTTGATATTGAGATTGGAGGTTGAAATCCCCTCCCTCCACCTGTACCAAAAAAAGGGTCTGCTTGAGAGTGATTTTGAAAGGATTAAATCACTCCAAAACATGCTTTTAAGGATTCAAAACCAATCTGATTGTATGAAAATTGTGCTTAAAAGTGTACGATTAAGGACATGTTTTAGAGTGATTTTGAACATTAGAAAAAGTGATTTTAACTATTTCAAAATTCTCTCTCATTCATGTTTGTAAAACATGATTTCAGTGTATGTCAGTCATAACATTGGCTTCACTTCATTTTTATCATAATCTTTTAAACAATTTTGAAACAAGTAAAGTGATTTGAATAGAGCTTTTGCCTTTCAAGACAAGTCCATGGTTTTTATATCATATTTTCGAATTTCTATTTGCACTTAATTTAGTGTTGAAAAATTCACTGAGCTTTGAACGCACTAGTCACAAGTAATATAGTGATGAACAAAGTATCATATCATATCTAACATATTGAAGTAAATTTAAGCTGTACGATGGTTTTCGGTGCAGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTTGTTGCTGTGGTTGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACATCCTCAGGCTCAGGCAAAATGTAATACGGGAAAAGTTGCCTGTTTCTTGTTTTGTATGGATTATGTTTGTATCTCTAAAGATTTGGGCTAAGTAGAGAAAAGATAATGTGAGCTCTGAAAGATACTAAATCTTTAGGTCTCAGTTAAATGCTTCTTGAAGTTGAGGCTTCTCGAGTTTCAATGAAAATCTCTCCAAAAGAGCCTTGGTTTATCTGGAAATATGGGTATGAGGGTTCAGCTATTTTGATGGATTTATTATCAGATTTAGCTCAATCAGTTTCCCAAAATTCCATTTTTGTTGTGCAAGAAGCATGTGGGGAAATTTTGGTTTGGTTTAAAGGGCCCTTTATTAACAGATGCATTTAGTACATATGCCTAAGGAGTCTTGAAGAAGAGTCATCCACCCAAGATTTGAGCATTTATTGAACTTAAAAG TTTAAGAGAAGTATATGTTATTATTATTATATTATAGTAGTAAAATGACAAATGAATGTACAAAGGGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTTAGAGCAGAAGCTCTCTCCCTCCCTTCTCCATAACAACAATGTCCTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACTAGAAACCCTTCTTCTTCTTCTTCCTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATCTCAGGTGGTTCAGCTACTGTTGCTGTAGAAACCCCCGTCGAGCAGAAGGATCCGGAGCCGGCCGAGGAGAGCCTTGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAGTGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTTGTTGCTGTGGTTGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACATCCTCAGGCTCAGGCAAAATGTAATACGGGAAAAGTTGCCTGTTTCTTGTTTTGTATGGATTATGTTTGTATCTCTAAAGATTTGGGCTAAGTAGAGAAAAGATAATGTGAGCTCTGAAAGATACTAAATCTTTAGGTCTCAGTTAAATGCTTCTTGAAGTTGAGGCTTCTCGAGTTTCAATGAAAATCTCTCCAAAAGAGCCTTGGTTTATCTGGAAATATGGGTATGAGGGTTCAGCTATTTTGATGGATTTATTATCAGATTTAGCTCAATCAGTTTCCCAAAATTCCATTTTTGTTGTGCAAGAAGCATGTGGGGAAATTTTGGTTTGGTTTAAAGGGCCCTTTATTAACAGATGCATTTAGTACATATGCCTAAGGAGTCTTGAAGAAGAGTCATCCACCCAAGATTTGAGCATTTATTGAACTTAAAAG ATGTCCTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACTAGAAACCCTTCTTCTTCTTCTTCCTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATCTCAGGTGGTTCAGCTACTGTTGCTGTAGAAACCCCCGTCGAGCAGAAGGATCCGGAGCCGGCCGAGGAGAGCCTTGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAGTGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTTGTTGCTGTGGTTGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACATCCTCAGGCTCAGGCAAAATGTAA MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM Homology
BLAST of IVF0016036 vs. ExPASy Swiss-Prot
Match: Q9SYX1 (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 6.5e-76 Identity = 157/270 (58.15%), Postives = 187/270 (69.26%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy Swiss-Prot
Match: Q6NKS4 (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.5e-74 Identity = 152/263 (57.79%), Postives = 184/263 (69.96%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy TrEMBL
Match: A0A1S3BLD8 (uncharacterized protein LOC103490842 OS=Cucumis melo OX=3656 GN=LOC103490842 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 6.4e-143 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy TrEMBL
Match: A0A0A0L5D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017160 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.4e-135 Identity = 257/269 (95.54%), Postives = 259/269 (96.28%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy TrEMBL
Match: A0A6J1HQ78 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465096 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 8.6e-116 Identity = 228/266 (85.71%), Postives = 236/266 (88.72%), Query Frame = 0
BLAST of IVF0016036 vs. ExPASy TrEMBL
Match: A0A6J1EC24 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431193 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 7.3e-115 Identity = 225/266 (84.59%), Postives = 235/266 (88.35%), Query Frame = 0
BLAST of IVF0016036 vs. NCBI nr
Match: XP_008448777.1 (PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]) HSP 1 Score: 514 bits (1325), Expect = 8.59e-184 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of IVF0016036 vs. NCBI nr
Match: KAA0041046.1 (uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK12056.1 uncharacterized protein E5676_scaffold1017G00700 [Cucumis melo var. makuwa]) HSP 1 Score: 513 bits (1321), Expect = 1.02e-180 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of IVF0016036 vs. NCBI nr
Match: XP_004147237.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus] >KGN55822.1 hypothetical protein Csa_009505 [Cucumis sativus]) HSP 1 Score: 486 bits (1252), Expect = 1.29e-172 Identity = 257/269 (95.54%), Postives = 259/269 (96.28%), Query Frame = 0
BLAST of IVF0016036 vs. NCBI nr
Match: XP_038906355.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 479 bits (1234), Expect = 6.63e-170 Identity = 253/269 (94.05%), Postives = 256/269 (95.17%), Query Frame = 0
BLAST of IVF0016036 vs. NCBI nr
Match: XP_022965154.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 423 bits (1087), Expect = 1.11e-147 Identity = 228/266 (85.71%), Postives = 236/266 (88.72%), Query Frame = 0
BLAST of IVF0016036 vs. TAIR 10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 285.4 bits (729), Expect = 4.6e-77 Identity = 157/270 (58.15%), Postives = 187/270 (69.26%), Query Frame = 0
BLAST of IVF0016036 vs. TAIR 10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 279.6 bits (714), Expect = 2.5e-75 Identity = 152/263 (57.79%), Postives = 184/263 (69.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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