IVF0016017 (gene) Melon (IVF77) v1

Overview
NameIVF0016017
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 321187 .. 321528 (-)
RNA-Seq ExpressionIVF0016017
SyntenyIVF0016017
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGGGAGTAATAATGATAGTGGATGGAATTAGAATTGAAAAGAAAAAGTGGGTCCAAATGGAGATTGCGAGAAAAGGGCATTGGCATTGGCGTTTGTCAAACACCACAGGACACGACACGACACGCAGCATTTTGGGGCGATGAGATGTGAATGGCGAATTTAACAAAAGCCTTTGAGTTCCTTTGGGGCCATGGGGGTGAGCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCATCGGCGCCACGCCTCGATCATACACAATCCCAATATATTCCACTTCTTTTTTCTTTTTTTTTTTTTTTCTTCTCCCCATTTTATAA

mRNA sequence

ATGGAGAAGGTGGGAGTAATAATGATAGTGGATGGAATTAGAATTGAAAAGAAAAAGTGGGTCCAAATGGAGATTGCGAGAAAAGGGCATTGGCATTGGCCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCATCGGCGCCACGCCTCGATCATACACAATCCCAATATATTCCACTTCTTTTTTCTTTTTTTTTTTTTTTCTTCTCCCCATTTTATAA

Coding sequence (CDS)

ATGGAGAAGGTGGGAGTAATAATGATAGTGGATGGAATTAGAATTGAAAAGAAAAAGTGGGTCCAAATGGAGATTGCGAGAAAAGGGCATTGGCATTGGCCCATTCATCTTCATCATTACTACTCATTTGACGCCATCATCGCCATCGGCGCCACGCCTCGATCATACACAATCCCAATATATTCCACTTCTTTTTTCTTTTTTTTTTTTTTTCTTCTCCCCATTTTATAA

Protein sequence

MEKVGVIMIVDGIRIEKKKWVQMEIARKGHWHWPIHLHHYYSFDAIIAIGATPRSYTIPIYSTSFFFFFFFLLPIL
Homology
[Close]
BLAST of IVF0016017 vs. ExPASy TrEMBL
Match: A0A0A0L1D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663620 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.0e-14
Identity = 50/83 (60.24%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 1  MEKVGVIMIVDGIRI-EKKKWVQMEIARKG--------------------HWHW-PIHLH 60
          MEKVG +MIV+GIRI E+KKWVQMEIARKG                     W    IHLH
Sbjct: 1  MEKVGAMMIVEGIRIKERKKWVQMEIARKGIGIGIGICICETPQDTQHAAFWMMRSIHLH 60

Query: 61 HYYSFDAIIAIGATPRSYTIPIY 62
          HYYSFDAIIA+GATPRS TIPI+
Sbjct: 61 HYYSFDAIIALGATPRSCTIPIF 83

[Close]
BLAST of IVF0016017 vs. NCBI nr
Match: KGN55503.1 (hypothetical protein Csa_012164 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 2.12e-19
Identity = 50/83 (60.24%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 1  MEKVGVIMIVDGIRI-EKKKWVQMEIARKG--------------------HWHW-PIHLH 60
          MEKVG +MIV+GIRI E+KKWVQMEIARKG                     W    IHLH
Sbjct: 1  MEKVGAMMIVEGIRIKERKKWVQMEIARKGIGIGIGICICETPQDTQHAAFWMMRSIHLH 60

The following BLAST results are available for this feature:
BLAST of IVF0016017 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0016017 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1D08.0e-1460.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663620 PE=4 SV=1[more]
BLAST of IVF0016017 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55503.12.12e-1960.24hypothetical protein Csa_012164 [Cucumis sativus][more]
BLAST of IVF0016017 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0016017.1IVF0016017.1mRNA