IVF0015927 (gene) Melon (IVF77) v1

Overview


Name	IVF0015927
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA repair protein XRCC3-like protein
Location	chr05: 20798691 .. 20799570 (+)
RNA-Seq Expression	IVF0015927
Synteny	IVF0015927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCGAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGTTTCGCTCTGATTTCGACAACACCCCATCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCAGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTTTTATGTTCGTCGGAAAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATGTTTCTGTCAAGAAATGAGGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTGAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAA

mRNA sequence

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCGAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTTTTATGTTCGTCGGAAAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTGAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAA

Coding sequence (CDS)

ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAATGCACCTTCGGCTGTCCGACCATCGACCGCTCCGTCGGCGGCGGCATCGCTTGTAGCTCCCTCACTGAGATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTTCCTTTCCGACGCCTTCAACAGCTTTCCGAAGCATTTTCCTCGTCATATCCCCAATTTTCCAATCCCTCCGATCACATCTTTGTCGAACCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCATTTACCCATCAGGCTTATTGTGATCGATTCGATTGCGGCCTTGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTTTTATGTTCGTCGGAAAGACGGGTTTGCCCGGCATTAGGGCTGGCGTGGGCTAATTGTGAAGTTGTGGGGGAAGGTGAAGGGATGGTGAATGGAAGTGAATTAGTACAAAGAAGAAAAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTGAATCATCTTGTGAGTATGTAATCAACAGAGAAGGAGTTGTGGGAGTTGAAAGCTAA

Protein sequence

MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNSHLPIRLIVIDSIAALKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES

Homology

[Close]

BLAST of IVF0015927 vs. ExPASy Swiss-Prot
Match: Q9FKM5 (DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 4.1e-75
Identity = 154/298 (51.68%), Postives = 192/298 (64.43%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AAL                        KLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCE----VV 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANC      +
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 GEGEGMV---------NGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
              +G +         N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of IVF0015927 vs. ExPASy Swiss-Prot
Match: Q9CXE6 (DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 94/291 (32.30%), Postives = 135/291 (46.39%), Query Frame = 0


Query: 7   LHLLQTT-------QKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHL Q         Q+ + GCP +D+ +GGG+    +T +   S  GKTQL LQL L  Q
Sbjct: 66  LHLFQQKESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQL---SEAFSSSYPQ-------FSNPSDHIFVE 126
            P   GGL A ++YI TE  FP +RL QL        +  P+       FSN   HIF+E
Sbjct: 126 FPRQYGGLEAGAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSN---HIFIE 185

Query: 127 PVHSAHQLFDIMPKIESSLENRNSHLPIRLIVIDSIAA---------------------- 186
                  L + + K    L +R      RL+V+DSIAA                      
Sbjct: 186 HAADVDTLLECVSKKVPILLSRGM---ARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLG 245

Query: 187 LKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCE 246
             L+ L+  +   V+  NQV D++     ++       + L +SE R+ PALG+ WAN  
Sbjct: 246 ATLRRLSSTFRSPVLCINQVTDMVEDQQSVS-------RSLGASEERLSPALGITWANQL 305

Query: 247 VVGEGEGMVNGSELVQ--RRKTRRWLHVVFAPHLPESSCEYVINREGVVGV 257
           ++       +  ++     R   R L V+FAPHLP SSC Y ++ EG+ G+
Sbjct: 306 LMRLMVDRTHEDDVTTGLPRSPVRTLRVLFAPHLPLSSCCYTVSGEGIRGM 343

[Close]

BLAST of IVF0015927 vs. ExPASy Swiss-Prot
Match: O43542 (DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 89/272 (32.72%), Postives = 127/272 (46.69%), Query Frame = 0


Query: 14  QKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP +D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++Y
Sbjct: 80  QRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVY 139

Query: 74  IHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLF-DIMPKIESSLENRN 133
           I TE  FP +RLQQL     +  P+         ++ +    Q+F + +  +++ LE  N
Sbjct: 140 ICTEDAFPHKRLQQL----MAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 199

Query: 134 SHLPI-------RLIVIDSIAA----------------------LKLKLLAKKYSLAVVL 193
             +P+       RL+VIDS+AA                        L+ L+  +   V+ 
Sbjct: 200 KKVPVLLSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLC 259

Query: 194 TNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCEVVGEGEGMVNGSELVQ 253
            NQV + M      +    G L F    + RV PALG+ WAN  +V      +   E   
Sbjct: 260 INQVTEAMEEQGAAH----GPLGFW---DERVSPALGITWANQLLVRLLADRLREEEAAL 319

Query: 254 RRKTRRWLHVVFAPHLPESSCEYVINREGVVG 256
               R  L V+ APHLP SSC Y I+ EGV G
Sbjct: 320 GCPART-LRVLSAPHLPPSSCSYTISAEGVRG 339

[Close]

BLAST of IVF0015927 vs. ExPASy Swiss-Prot
Match: Q08DH8 (DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 91/287 (31.71%), Postives = 131/287 (45.64%), Query Frame = 0


Query: 7   LHLL-------QTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHLL       +  Q+ + GCP +D  + GG+    +TE+   S  GKTQL LQL L  Q
Sbjct: 66  LHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLF- 126
           LP  +GGL A ++Y+ TE  FP RRLQQL    +      ++   H+ +  +   HQ+F 
Sbjct: 126 LPPRHGGLGAGAVYVCTEDAFPSRRLQQL---IAQQQRLRADVPGHV-ISKIRFGHQIFI 185

Query: 127 DIMPKIESSLENRNSHLPI-------RLIVIDSIAA----------------------LK 186
           +    +++ L+     +P+       RL+VIDS+AA                       +
Sbjct: 186 EHAADVDTLLQCVREKVPVLLARGMARLVVIDSVAAPFRCEFDGAALALRAQRLLALGAE 245

Query: 187 LKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCEVV 246
           L+ L+  +   V+  NQV + +   D            L +    + PALG+ WAN  +V
Sbjct: 246 LRRLSCAFRSPVLCVNQVTEAVEEQD------------LVAGPPGMSPALGITWANQLLV 305

Query: 247 GEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGV 257
                     E        R L VVFAPHLP SSC Y I  EGV G+
Sbjct: 306 RLLADRQRPEE-APLTPPGRTLRVVFAPHLPASSCSYTIAAEGVRGM 335

[Close]

BLAST of IVF0015927 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-20
Identity = 83/273 (30.40%), Postives = 131/273 (47.99%), Query Frame = 0


Query: 23  IDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPF 82
           +D ++ GG+AC SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F  
Sbjct: 90  LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149

Query: 83  RRLQQLSEAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--DIMPKIESSLENRNSHLPIR 142
            RL +++E   S +P++ N  + + +    VH   +L   +++ +IE SLE       I+
Sbjct: 150 ERLVEIAE---SRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIE-SLEEEIISKGIK 209

Query: 143 LIVIDSIA-------------------------ALKLKLLAKKYSLAVVLTNQV------ 202
           L+++DS+A                         A  LK LA+++S+ V+LTNQ+      
Sbjct: 210 LVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSG 269

Query: 203 -----VDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCEVVGEGEGMVNGSELV 255
                 DL+  +D L      +L    S    V  ALG  W++          VN   ++
Sbjct: 270 ALASQADLVSPADDL------SLSEGTSGSSCVIAALGNTWSH---------SVNTRLIL 329

[Close]

BLAST of IVF0015927 vs. ExPASy TrEMBL
Match: A0A5D3BPT7 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00290 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 258/293 (88.05%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
            EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. ExPASy TrEMBL
Match: A0A5A7UPR6 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00560 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.4e-136
Identity = 256/293 (87.37%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
            EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. ExPASy TrEMBL
Match: A0A1S3BRJ5 (DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.4e-136
Identity = 256/293 (87.37%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
            EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. ExPASy TrEMBL
Match: A0A0A0LK93 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.0e-133
Identity = 251/293 (85.67%), Postives = 256/293 (87.37%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
            EVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. ExPASy TrEMBL
Match: A0A6J1FDM2 (DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.1e-118
Identity = 228/293 (77.82%), Postives = 241/293 (82.25%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+AC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGL A+SLYIHTEFPFPFRRLQQLS+AFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLKAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAAL                        KLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANC          
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
            EVVGEG+G+VNG EL QRR TRRWLHVVFAPHLP+SSCEYVINR+GVVGVES
Sbjct: 241 EEVVGEGDGVVNGGELAQRR-TRRWLHVVFAPHLPKSSCEYVINRQGVVGVES 292

[Close]

BLAST of IVF0015927 vs. NCBI nr
Match: TYK01347.1 (DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 491 bits (1265), Expect = 2.94e-174
Identity = 258/293 (88.05%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 258
            EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. NCBI nr
Match: XP_008451720.1 (PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 489 bits (1258), Expect = 3.43e-173
Identity = 256/293 (87.37%), Postives = 258/293 (88.05%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNSHLPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 258
            EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. NCBI nr
Match: XP_004150781.1 (DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical protein Csa_021163 [Cucumis sativus])

HSP 1 Score: 481 bits (1237), Expect = 5.63e-170
Identity = 251/293 (85.67%), Postives = 256/293 (87.37%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAAL                        KLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC          
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 258
            EVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of IVF0015927 vs. NCBI nr
Match: XP_038890688.1 (DNA repair protein XRCC3 homolog [Benincasa hispida])

HSP 1 Score: 451 bits (1159), Expect = 4.14e-158
Identity = 239/293 (81.57%), Postives = 248/293 (84.64%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRS GGG+ACSSLTEIVAESGCGKTQLCLQLSL AQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSAGGGVACSSLTEIVAESGCGKTQLCLQLSLYAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIES L+N NS LPIRLIVIDSIAAL                        KLKLLAK+
Sbjct: 121 MPKIESFLKNSNSQLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSL VVLTNQVVDL+GSSDGLNALRIGNLKFL SS R+VCPALGLAWANC          
Sbjct: 181 YSLGVVLTNQVVDLIGSSDGLNALRIGNLKFLSSSGRQVCPALGLAWANCVNTRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 258
            E+VGEGEGM+NGSELVQRR TRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEIVGEGEGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCEYVINREGVVGVES 292

[Close]

BLAST of IVF0015927 vs. NCBI nr
Match: KAG7020901.1 (DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430 bits (1105), Expect = 6.94e-150
Identity = 228/293 (77.82%), Postives = 241/293 (82.25%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+AC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGLNA+SLYIHTEFPFPFRRLQQLS+AFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLNAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAAL                        KLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC---------- 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANC          
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 -EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 258
            EVVGEG+G+VN  EL QRR TRRWLHVVFAPHLP+SSCEYVINR+GVVGVES
Sbjct: 241 EEVVGEGDGVVNSGELAQRR-TRRWLHVVFAPHLPKSSCEYVINRQGVVGVES 292

[Close]

BLAST of IVF0015927 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-76
Identity = 154/298 (51.68%), Postives = 192/298 (64.43%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AAL                        KLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCE----VV 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANC      +
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 GEGEGMV---------NGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
              +G +         N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of IVF0015927 vs. TAIR 10
Match: AT5G57450.2 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-76
Identity = 154/298 (51.68%), Postives = 192/298 (64.43%), Query Frame = 0


Query: 3   PENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC  +D  + GGI+C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSHLPIRLIVIDSIAAL------------------------KLKLL 182
           FDIMP+I+  + N  +  P++LIV+DS+AAL                        KLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCE----VV 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANC      +
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 GEGEGMV---------NGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 259
              +G +         N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of IVF0015927 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-18
Identity = 81/287 (28.22%), Postives = 126/287 (43.90%), Query Frame = 0


Query: 5   NLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGGI+C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 94  DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q++EA      +++               P D   +IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSHLPIRLIVIDSIA-------------------- 184
              V S  +   ++  +E  + EN++    ++++++DSI                     
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYDDLAQRTRVLSEM 273

Query: 185 ALKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC 244
           ALK   LAKK+SLAVVL NQV           AL +G+  +  S   RV     L W   
Sbjct: 274 ALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGD-SWSHSCTNRVI----LYW--- 333

Query: 245 EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGV 254
                     NG E        R+ ++  +P LP +S  Y +   G+
Sbjct: 334 ----------NGDE--------RYAYIDKSPSLPSASASYTVTSRGL 350

[Close]

BLAST of IVF0015927 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-18
Identity = 81/287 (28.22%), Postives = 126/287 (43.90%), Query Frame = 0


Query: 5   NLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGGI+C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 118 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 177

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q++EA      +++               P D   +IF
Sbjct: 178 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 237

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSHLPIRLIVIDSIA-------------------- 184
              V S  +   ++  +E  + EN++    ++++++DSI                     
Sbjct: 238 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYDDLAQRTRVLSEM 297

Query: 185 ALKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANC 244
           ALK   LAKK+SLAVVL NQV           AL +G+  +  S   RV     L W   
Sbjct: 298 ALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGD-SWSHSCTNRVI----LYW--- 357

Query: 245 EVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGV 254
                     NG E        R+ ++  +P LP +S  Y +   G+
Sbjct: 358 ----------NGDE--------RYAYIDKSPSLPSASASYTVTSRGL 374

[Close]

BLAST of IVF0015927 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.6e-11
Identity = 54/191 (28.27%), Postives = 87/191 (45.55%), Query Frame = 0


Query: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MT  + L   ++  K T GC  +D  +GGGI  S++TE   E   GKTQL   L +  QL
Sbjct: 93  MTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQL 152

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           P +  G N    YI TE  F   R+  ++E F           D+I     ++    +++
Sbjct: 153 PTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYNL 212

Query: 121 MPKIESSLENRNSHLPIRLIVIDSIAAL-----------------------KLKLLAKKY 169
           +      L  + S  P R++++DSI AL                       +L  +A+++
Sbjct: 213 L----LGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEF 272

The following BLAST results are available for this feature:

BLAST of IVF0015927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM5	4.1e-75	51.68	DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 S...	[more]
Q9CXE6	2.7e-26	32.30	DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1	[more]
O43542	1.3e-25	32.72	DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1	[more]
Q08DH8	1.5e-24	31.71	DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1	[more]
O15315	1.3e-20	30.40	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]

BLAST of IVF0015927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPT7	1.1e-136	88.05	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7UPR6	7.4e-136	87.37	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BRJ5	7.4e-136	87.37	DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV...	[more]
A0A0A0LK93	2.0e-133	85.67	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4...	[more]
A0A6J1FDM2	4.1e-118	77.82	DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 P...	[more]

BLAST of IVF0015927 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01347.1	2.94e-174	88.05	DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa]	[more]
XP_008451720.1	3.43e-173	87.37	PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA rep...	[more]
XP_004150781.1	5.63e-170	85.67	DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical prot...	[more]
XP_038890688.1	4.14e-158	81.57	DNA repair protein XRCC3 homolog [Benincasa hispida]	[more]
KAG7020901.1	6.94e-150	77.82	DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of IVF0015927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57450.1	2.9e-76	51.68	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT5G57450.2	2.9e-76	51.68	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT2G45280.1	3.6e-18	28.22	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	3.6e-18	28.22	RAS associated with diabetes protein 51C	[more]
AT3G22880.1	9.6e-11	28.27	DNA repair (Rad51) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 11..148 e-value: 3.3E-23 score: 82.3 coord: 149..254 e-value: 8.3E-7 score: 28.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..256 e-value: 6.9E-48 score: 165.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..254
None	No IPR available	PANTHER	PTHR46487	DNA REPAIR PROTEIN XRCC3	coord: 149..257 coord: 1..148
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 12..258 score: 29.396048

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015927.1	IVF0015927.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045003	double-strand break repair via synthesis-dependent strand annealing
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0071140	resolution of mitotic recombination intermediates
biological_process	GO:0090656	t-circle formation
biological_process	GO:0000722	telomere maintenance via recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033065	Rad51C-XRCC3 complex
cellular_component	GO:0005657	replication fork
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0003677	DNA binding