IVF0015877 (gene) Melon (IVF77) v1

Overview


Name	IVF0015877
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein TIC 40, chloroplastic isoform X1
Location	chr09: 14790643 .. 14802369 (-)
RNA-Seq Expression	IVF0015877
Synteny	IVF0015877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACATAAGCCCGGAAGCAGACGATCCGGACCAATGAAGCCCAGCACTTAAGTCTGCCCAGAAATTTTGCTCACTGTTCACTCTCTCAACTAAACCCAAACCTTCTCTTCCAAGGGCTCTTCCAAGCCTATCTTCTTCTTCTTCCTTCAGTCCTCTGTTTATCATCCCACCAAATTGTAAACCAAAATCAATGGATAGACTCAATTTAGCCCTAACATCTCCTCCCAAGTTTCTTTTCCTCACTTATTCTTCTGCTTCTTCTATCTCCACTCCCTCCAGAACCAATCAATTATGTGCAACCAGGCGTTTATCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTCTCGCTTCTGCTCTTAATCGTCGACCCAACCACCGTATCCTCGGTAATTTCCCAATTCCCTTTTCAAAATGATGCTTTTAAACTTCATTCCTTCTTTATTTGATTCTTCTCTGTTTTCTTCGCTACCATTGAGACCAGTGGCTGAACGTTTTGCAACGGTTTCTTCTTCTACTACCAGCAATGACTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCCCCCTCCTCATATGTGTAATTTTTCGTTTCCTTAACTTCTGTTTTTAGTGGGTTTTTGAAATCTAGTTCTACGTTTTTTTCCCTCATAAGAATTGGGTTTGGTTGAATTTATATGATATGAATTAAGTCCAGTATTTTAGATGCAACTGACAGCTTTCTTATGGTTGCAACTTTTTTAGTGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGGTGAGTGAGAACCGAACCTGGTTGTCTGAACAAGAACTACATTTTTTTCTACTGTGGATGTAATTAAAACTCTCAACAAGCTCTTAGGTCGAATGTTCTTTTAACAGATTTTTAAAATTTTTGCAGGTGGCTTCTTACTTAAAGGTGAGTGTTCTTCTACAAGGTATGGGATTATGATTGTTCCTTATAAAATGTCCGCTGTCATTTCTGCTAGAGTTGGTCTTCCGTAGCTCTTTCTTAGCTTGCAGTTGGACCGATATTCTTCTGTGCAGTTGTTGGCCTTTTGAAAAGTTGTATCATCCTTTTTTACATAAACTTTCTGTACTTTTGTTGTCGGAGAAAGGTGGTGAATGGCTTTGCTGCTCATCTCGTTATTATTACCCTTAACTTTGATTTTGTTTTATTTTTTCAATTTGTTTTTGCATGAAAAGTGTATTTCATATCCACGGGGTACTTCTGTTCTCCTTCTTAGCTATCACCTAGCCTTTTTGATTGAACTAGCCACAAAAACCTCATTGAAATCTTCAAGTTTAAAGATTAGTAAATGGACGTAGAAAAACCATGTGCTAGCATTTTGGACTTTGGTATCATCATTCTGATGTTTTGGGTTGATGTTTTTATAATTCTGTGTTTTATAAGTGGTAGAACTTATTTGGGTTTAAGGGACCAATTTACGGTTGAGGGAAATTTTTTAGTCTCTTTCTATCTTACAACTGTGTTTCTACTATATATATTTATATATTTTTTGCAGTATCATACATCCATACCTTACATCTTTCAGCTACTAATACTAGTTTACTCTTGACACTCCCATGCTTTCATTAATGTGTTGCTTCCTCGACCATATTCTTGCCTATTGACCAAGTTCCATGCTTAATTAATTGATCCCACCCTTGCCATATTTTCTTTTGTAAACGTCAAGGATTGGGGAACTATAAAAGTTTCCCTCTCATAAAAGATTTTTGTTTTAGTACGTAATAATGTTTCTGTTTACTCCCCCAAAAAGCAGAATCTTTTCCAGCAGTTTTTCTTCCCTTTGTCCATCTACATTTCTATGGGTCTTTGGCCTCTATAAGATTGTTGTACCATTTTTTTGCATTAAAGTTACAACTTGGATCAGTACTAATTTCGACCTGTCTGTGTTTTTCTGTTCCTATATATTTTATTGTAAATTTGTAATTACATTCCAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGTCCGATGAGTAATCCTACACTTTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACGACAGTTACTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGAAGAACCAGTTACTAATGTCAAAACTGGGACAGAGAACATGGAAGCAAAGAAGTTTGGTAACTAACGATCCTCCTCCTATTATCACTTCAAATTTCAATATGTTGGTGGTTCTTGATTTATATTTGTGATATGATTTCTGTGCTCTCGAGTGACAACCTCTTGGCTGAAGGATTGAACGTTTTGGATACAAATGTTGAGGTTTACATTTTAGTTCGTTTGATGAGCATGGCGTAATAATCTTTTAGGTTTTATTGTATCTTGGTATTGGTGTGTGAACAGTTTCTTCGGTAATCTTCAGGATTTGTTGCTTCTCAAACAACTTTATGATATTTTGTTGTCAAAACTCAACCTGATTTATAATATCTTCAATTCCTAATCTCCTTATTGCATTCATCAAGGAAATTTGTTCCAACTTCCAAGGTAGGAGGCTAATTCATGAAACTTTCTTTGACAGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGATGCAGATGTTTCAAAGAGTGCTCAGCCTACTGAGGAAGTAAGTTTGTTTTTTTAGCCGTGTGGTGGCTAGAATTGGTATGATCATTTACTCTTTTTGATTTATTCATTCAGCTTCCACAGAATGGAGTTGCTTCTAAGCAGGCATATATTGGTTCAGATGGATCACAATTCAGCCGTAAGTTGAGAACAATAAATGATTTTACTTATTTTGTGAATGCTACTGCTTTACTCGGTGTGTGTGTGCGTGTGTGCAAGATCTACTTAAATAGAAAGTATCTCTGTACAAGACCTACTTCAAAGAAAGTAAAACGAAATGGCTTGGCAACTCAAAACCCAGTCTTGAAAATAAAAGAGTTTTTGATCTACATATTGACTCTCTTATAAAATTTAACCTTGTTATTTGATATTTACATCTCATAAATCTTCTTTCATAATTTCTGTGACTTTATTTATTTAACTTTTGTGCTTCCAGACATTCAGGATTGAATGTGTATTACTGCAGCTTGGTCATTGTATAAATTGTATTAAAATCTATGATATTCTCATCTATTAGGAAAACCAGGCTCAGTGTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCAACGGTGCAGAAGATGATATATCCGTATGCAGCTTTTACTGTTTATCTACTTCATAATTTGGTTTCCCCATATATATGTATATTTATATCAATGTGATATAAATTACTTCACATATTTAAATGCAAAGAATTTACTCTACGTCAAGCCAATTTGGTACAAGGATAGAAGGATAGTGACGTTAGGTCCTGTAATCTGTCCGGTTCACTCACCCCAAAGTATACTTGCTATATAATAGAGTTCCACCAAGAACAGGATCAAGAGGAGTTCTTCACAATCTTTTGGAGATTTAAGCTTGATTTTTATACTCGATACTGCCCGGGCTAAGCCTGCCTACTTTTTTGTGATAGGAGTTAATTTTCCACCCAACAAAATGACTACCTTCTTCATGTGTGCCCTTGTCTCCTCAAGGAAATCTCATACTTTTTTCAGTAGTCTTGATGATATTTATTGATATTTCGCATAGGTAGAAAACAAAAAAGTGTAACGCTACTGCCTCTTGAATAAGTCCTCTTCCGTCCCTTCTGTCTTCTCATTGACATTGGTGGTGGAGATAACAACCTTTTTAACTAAGAAGACATCTTTAAGAAATGCTGTTTCAAGATTGCTGAAAGTTTTTTGGAAATTACTGGCGAATCATTGCCTTGGGGCGTTCTTATCAACCAACTCAAGGATAAGCTTTTTTGGTTTCTCTATTTTAATGTTTCTCAGGGATAACCTTGGAAGATTCAGTAGTACTGTAGTAGAGTAGCAGGAGACATCGGGGAAATTTAAATGAAAGTTGCTTTAGCTGTTTTTGAGATAAAATTTTCAGCAAAGTCTAAATCACCACCCCCCCAAGTCAAACTGGTGCCTGTTGTTGCACCAGGGGCCGTTATACTAGGTGCTAAAGTATGGGTGTTTTGTATCCATTGAGCAAAGACGGGTTGTAATTGTATAGCGGTATCTGAAAACATATCTTGGGGATGCCCTAAAGCACTCATGGTATCGTTATGAATATACAAACCAAAACTGTGAAAGCCTAAAAATATACACACCCAGTTCAGATGTGATATGATTGCATCACGATGCCTAAGTACACGATCTAATAGATCGTTGTAGCGAGTAGTTGGATCATAGTCTCTTACCATAAAAATGGCTGCATGCGCAGCAGCACCAACTATGAGAAATCCACCAATCCACATGTGATGTGTGAACAATAAAAGTTGTGTACCATAGTCGGTAGCTAGATATGGATAAGGGGGCATTGCATACATATGGTGAGCTACAATAATGGTTAAAGAGCCTAACATAGCTAGGTTAATAGATAATTGAGCATGCCACTAACAACTGCCACCTCCTGCCTGTTGATAGAGAGAACAATTTATTTCAATCTTAAACCCTACTCAGCCCATTTATTTTGATACAGCTGTGAAGTCTATCCAGCCAGATTGTGGCCCCCCACTAGTTGATCCAATTTCCTCCAATGGCAAGTCTCTTCCTATTGCTCCTCTAAAACCTTTGGCTCCCTTTTTTATTGCTGGTTCAGTGCCCACTAAAACTTCTTCCGGAAGAGTCCCAAATTCCAAATCTTCCTCCATTTCACATTCTTCTTCTTCCATTTCTTCCTCGGTCATAGCAAGAGGAAAATGATCCGAAGTGACACTATTTAATCGATGAATGTGAAAGGATCCAAATTCAATAGCACAAATCTCGGTAACCAAAAAACGATCAATTAAGGAGGTATATTGGGTATATCCAAAGCTGGACCAAGTGTAGGTTACATTTTTTCAGAGGCACGTCCCTCAAATGATAATTAGCAATCCATTGGTTGAAAAGCTGCATGTCGTTTGTAACAGATTGATTGGATGGGCCATATACAGTTGAGAGCTAAAAGGAAAAACCATCGGCGAAGGAAATACGTATAAAAACTATATAAAGACCCTGTGTAACCTCAAGAATAGTGAAATCAAGTGCACGTCATAACATAAGGAGACCACTCGAAATATCAATCGCATCAAGCGCCGTCCAGCCAATAAATGTGGAGCTCCAAATGGATTTAATAGTATTAGAATTGGTATCATCAAGTTTGGTTTCCTGGAGAAGATCAATACTCGGATTTTGTTGCTGCAAGAACCCCTTAACTAATGCACATTTCTTCCAGGAATCCAAGCCACGAACATTCCATGAGAAACCTCCCTATTGGCTAAAACTGATGATTTATCGTAGCAAATTGGTGATTGCAGATTTTAAAGCTCCCTCTGTAGTTTATTACATTTACTGTTGGCAGTGTAAGGCTTCTTCGCTTTTGGTGGGGGGAAGAGAGGGGATGGCCATGACACACAAGTCGTATTGCAAAAGTATAGAAGCCATATCTCGGAGACTGATAGGGGTGGCTGTTGATGTTGATGGGGTGCTGCTAGTTGAATGTTTTGTTGATGGGATAGTAATGTTATATCGGGCTGTGCAAATCGGTAGGGACCAGGGTAAGATAGTAATTGGGAGGTTGGATTCTGCTGGGTTTTCTCCAAAAACAGCATCTTCCAATGAGTGAGTAGCAAAATCGTCTTTTGGAGAGAGAGGGCTGGTCAAGTAGGCTTCCAAATCAGAGAATGTTTGAAGCTGGTTTTCAGGTGTTGCCACGTGTTTTTGTTCCTTCACGCAAATTGGATGAATCAGCTTGGAAAGTAACCATTGCCAATGATGGCTGATTAAAGGAAGGTGATGGTGATTTTCTGGGGCCTAGGAGGGTATTTTGATAAGGCAATGCAGGAGAATGGGATGTTCACATGGAATATTATTTGCCACTGGATTAGGAGAGTCTGCAGAAAATTCAAATTGCCGAGAACATGGGATTTTTGGTGGGTTAGTTGTGTTGTTAAGGAAACAATAGGATTTTGTCCTTTTTTTATCGTGTAATGCCCTAGATTTGCCACCAGATTAGGAAGGTCTGCAGAGAAGTCAAATTCCTGAGAATCGTGGGAATTTGGGTAAGCCGGCTGTGTTTTTAAGGAAACAATAGGATTTTTCCTTTTTTTATCGTGTGAATGCCCCAGATTTGTAACTGTCAATTTAATTCCCGTAGATGCTGCCGCTGGCAAGGTGGACTTCCCACCACCGCTATCATCGTCGCCAATGTATTTGGGGTGGTCATAACATTGGCCCCATGAATTCTTACTGTTATCTTCGATCCAGCAAGCTCCATTGGTAGTAACAAACGAGCAGGTATGAGGCCATAAGAGTTCGATCGAATCTTCAACCTAGCACCTTTGAAATTTAACCCTCTATCAGTTTGATTAGCGCATCCAACATATCCCCCACAAGGGTTGCCTATGAACTCGAAAATCTGCACATTCTATTAGATTGGTGGTCGGTCAAATGCATTAATCCAACCTCCATAAGATGCTGTTTGATGGCAAGGATATGAAGAAGTGAGAGTTGCATCCAAGACCGCAGATTGAAATTTCCAATGTCCGGTCTTCATGGCTGTATAAGGATTTGGCAACAGTCGCATCATAAACATGGATAAGGGCCTTGTCATCAAGGAAGGGGTTGATTGTGCACCGTGATGTAATCGTAGATTGTGTAGCTTCACTAATTTCCGGCCAGGAGTCTATGAGTTCTCGTTGTTGTATCACAACCATTGATTTCCAGTCAGAGTGTGGGGGAGACCTGTGATCAGATCTGTTGGGAATTGGCTTAACCACTTCATGTTTGGGTGGCTTGTTGGGAAAAAGATTGTACCGCAGTCTTGTATGTATGTATTTTAATGGGAGGTGGGGAAGGGCCAGTCATATAGTCAGCGAGAAGGGAGTAAAAGGAGAACTATCCTTGCTTATTTTCCTCCAATGGGATAAACAGTTTTGTCTGGCGTCTTGTGTTGTAGAGGAGAGTGAATTCAACATAGCTAACCATTTTTATTGTGTAATTTTTCCTGCCAGAGGATTGCTCCATTATCCAAGAACTTTTCGAAGAACTTGTAGTTGCAGGGTTCATAGTGTAATGTGTGGAAGGAGGACAACCATGAGAGAGCTTTCCAAGAGATGCAAAAGAATTGTAGTGAAGTTTTCCCTTTCTCCGTTATTTTCTCACGTTGACCATCACAAGTTCCATCAGGTTGTAAGGTGAAAATCTTCCAATATATATGGATAGATCAAATAGGGTAGAGGGGAGGAAGTGGCAGACTGGTGGTGGGTATGGTGGAGGAGCGGTTATGGTTTGGTGGGTGGATAAGGGCAGGAGAGAGGAGAGAACATTTTTATTTCATGCAATCCATCAGATATAGAGTTGTCAGCAAGTCGTCTGGGGCTCAAGATTGTTTTTTTGCCTTTCCTTGCCGTCTTTTTTCCTTTCATTTTGAAGCTATTAGTGTGGAAGTCTGCCGCCGAATCTGGGTTTCTTATTGAAGAACCACTACTTTTGCTTTGTAGTTTTTTTCTATCCTTTTTGGCTTGAGATCTACTGGAGTTTGGCTTGCTTGTATTATTTTTTTTATTAATCTTTTAATCATTTTACTTGTTTTGCTCCTAGTATAATTCTCTTGTACTTTGAGCATTAGCCTCATTTATTATCATTGATAAAAAGGCTTGTTTCTGCTTAAAAAACATAGAGAGAACAATTAGTTAATCTGAAAGTTTGATGTATATTGTACATATATACATTCCGTATCCAAGGACCAGAATCAGATATAATGATATCCTTGCAGCATCTGTTTCTTTTCATCGAATTGAAGTTATTGCCATAAGACTCTTCACTAAGCACAGATGGTTATTCAGTTTTCCGTTATGCCATGGGTATTCAATGGCATCTTATTTTCTGCTTTATAGTTCCTTTCATTGCTTGTCTTGTTACGTTTGCATGTAACTTGTATGACCATTTTCTGAAGCAGCTTACAGATAAATTTTATTATCGAGTCCTTAAAATTGTGTTGTTTCTGAAAGGAAGATATTTTTCATGTTGCAGCCATTTGCCCGAGGAGATGAGAAATCCAGAAACATTCAAGTGTAAGTCTATTGATTAATTCAATCTTCAGGCAATATGCTTTCTATAGCAATGAGAAATGAGGGTATAAATCAAAATGATTAGGCCAAGGGGTGTTCCTGCTCAAGATAGAAGCAGGAATCCTGGGTGGGGGAGGTTATGTTAGAAGCATCGTGTGAGACTTATAATTTTATTAGTTTAACATTTACACTTTTGTAAGTGAATCAATTTGGATTCTCAGTTAAGTTTCTTTTTAAAGTAGTCCATGCATCTATTCTAGATCGTCCATTTTATTAGTTGAACATTTGAAGAAGCCACACGTGTGAGAATTGAACTTTGGATGATTATCGAATGCAAGCTTAATAAAGGGTCAAAATTGGTTCACTTATATCAATTTACAAATTTAATTGAAACAATTATATGTTTCACATGATATTTATCGAACTAAGTTTGATGGAGGGTGTTTATTGATGAACTTCAACTACGGCGTGGAAGTATGCTTATTATAGTGTTGCATATTGTACTATTATTCTTTTAGCAGCCTCATAGATATATGAAAGTGAAAGCTATATTATTGGCCATTGGGCCTATTTTCTACCATTTTTTGTTACTCCTACTACTAATTATATTCAGATGGTGAATTATATTAATATGGAGTTTCTATACATTTATTTTGAACTTCACAATCTAGAATAATTTCTGGTGTTTCTGTGGTTTTCTTTGGGGGTATACTTGGGAGATTGGCTACTTAGTTTGAAATTTTACTTGAAGAGTTTCTATTTTCTAATCTTCAACAAGGCATCACTTATTTATTAACTTTATTGAATAGGGATGATGCAAAATCCATTATATCGTCAACAATTAGAAGAAATGCTGTAAGTTAAGTTTATTTATTTCTTTTTTCTCCTTTATAGAAATAATTATTTTATTCTATTCAAAGACTTTTTATATTACGTTTGAATATTGATGACATTTTTCCAGGGGTTGCTTATCCCAATTGTTTTTGAGACATAATTGATAGGTTGGACAAACTGGAGGTGTCGGTACCTGTGGATGTGGACATATTTAAATAGTTATTTGTGCTTTATTTTATATCATTTATGTAACATTCAATAGTGTATAATTTTACTTTTCATTTCGTGGATGCTATAGGTGCTGAACAGTAATTACATGCTTGTATTTCTTGTCTCATTGTCTTCTCATTTTCATCATCTTGGTCCATTGGGTTAAAAGTAGGACAGAACATCTTCTAAAGTTAGTTTTTTTCCATACATAATGTTTGAAGTACGGCTTTGCATTTAATCAATTTATAAGTAAAATATTTGAAGCATGTGATATAACACATGTGATATAACACTATTCTTAATCATTACTCTCAGTAACAATATGAGTGGAAGCCCACAATGGGACGGTCGCCTCATGGATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTCAAGCAGCAATTTGGTCAGTGAAGTTGATCTCTTTTGATTTTGTATTTGTTAATAGTTGTTTTGTGGGTGTTAAATGACTTGAATACTCTTCTGTTGGCATTTGTTATGACGTCAGATATTTCATATATAGCTGAGATGATCATATTTGTGATTTTTTGTTATTGTTGCATTACAATCTTATATTCTTCGACTCTTAAAAAATATGACCAACATTTGGTTGTTTTTTTGGTCAATAATTGATGAGCTCGGAAGTTTTTGTTTAACTTTTATTCAGTTTTGTTTTCTGATGCTGTTTATCCCTTCTTGCTGAAATTGATTTAAATATATTTTTTGAAATTGAATTTTTAAAATCACGATTCACAAGTCTCAGCATTAATAATTTCATTTGATATATCAATATGTTTCCGAGAGTTGGTACTTTTTAGAAATGAGATTTTAAAACAATTTTATGTAATTAGGAATAAAAACTGTTTCCCCCCATGTTTTCTGTGATGTTTTCTCAATTAATTATTCGTTTATATTAATATTAAAAATAATTTAGGCTTGCTCTTTATTTTTGTACCTTGACAGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTATGTTCTACTTAAGGTTAATAAATTTTTGTTCGAATCTAATATTTTGATTTTAATTCTTGCAGTGTTCACAAAATCCACTGAGTATCACAAAGTATCAAAACGACAAAGAGGTACATTAAATCAGTATTGTATTTGCACTTCCATCTATCACTCGGCTTATATAGAATCCAAACGAAGTTGACATAAATTCAGAATTTCACTTTCTTGATTCTGGTGGAAGACCTCTTTTGCTGATTGTTGGTATATATTTTATGTAGTTAAGTTCATTTTCAGCTTCACTTTCTGCCTTTGTAGGTTCATTCACATCGCTTCTATTTGATAATTAGAAAACTGTGGAGTTCTGTTAGAACATTCATTTCTGTTGTGGTGTATGGTCTGTAGATAGTGTTTAGCTATTTTTTCCGTCATTTTTGGCTTCGTGTTTCATGCGTGCATCTGTGGATACCTTCTCATTCAATTCCTGCTGATGAAAGTTTCATCGATTAAAGAAAATAAACACATCGCCAAAACTTGAGCATAACTTAACTGCTTGAGACATATAGTATATGTCCGAGTTCAGGAATCCGAATTTCAGCCATCCCATGATCAACTCTTAAAAGAAAAAACCTATTAATTCTGTTCTTTCACACATGGGGTTGATTGTTTCATTTGTCTTTGTTTAATGCTCGATGTGATATTTTGGACTTGTATTTCTTATTTTCTTGGGGAGATGAGTATTGATTTCCATTGCCTTATTTCTTTCCAACTAACAAACGATATCACTCTCTCTCTCTTCTCTCTCATTTCCTTTATATGTTTTCTTTTCTTTATATTCCTTTAGGTCATGGACGTTTTCAATAAGATATCTGAACTATTCCCCGGAGTTTCTGGAGCACCATGATAGTTGTAGCTGTTTTAGTACTGAATAGTATAATATGACAAAATGTGAATTTGTGGAAGCTTGAGCATGGTTCCCTCTCCAATTGCAAAATAAGTTGGGGGAAGCCATATCGGTCTTCTAGTTCTCGAAACGAAGTTAGCTGAGTAAGGTCTCACCTGCTTCAATTACATGAAATATATTGGAAATTTTTGGGTGAGCTAATTCTTTTTTCCCTTTCTTAAACTAAAGTTTCCTGTGTATTACTTGCTTTCTCAGGAGATCATGTATTTATTAGTGTTTTGCATTTAATCAGTTTCATAGGAACCTCCTTGTTCACAGTGGTCAGATTGTAAGTAAGAATCTTTTTATGTTCCTTGATATATCAAGGCAGTCGATGTAATTTATATAAGTAATTTTGGCATATTCCTATTTGCTTTAATTGAATGACATTGTTGGAGG

mRNA sequence

GAAACATAAGCCCGGAAGCAGACGATCCGGACCAATGAAGCCCAGCACTTAAGTCTGCCCAGAAATTTTGCTCACTGTTCACTCTCTCAACTAAACCCAAACCTTCTCTTCCAAGGGCTCTTCCAAGCCTATCTTCTTCTTCTTCCTTCAGTCCTCTGTTTATCATCCCACCAAATTGTAAACCAAAATCAATGGATAGACTCAATTTAGCCCTAACATCTCCTCCCAAGTTTCTTTTCCTCACTTATTCTTCTGCTTCTTCTATCTCCACTCCCTCCAGAACCAATCAATTATGTGCAACCAGGCGTTTATCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTCTCGCTTCTGCTCTTAATCGTCGACCCAACCACCGTATCCTCGTGGCTGAACGTTTTGCAACGGTTTCTTCTTCTACTACCAGCAATGACTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCCCCCTCCTCATATGTTGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGGTGGCTTCTTACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGTCCGATGAGTAATCCTACACTTTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACGACAGTTACTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGAAGAACCAGTTACTAATGTCAAAACTGGGACAGAGAACATGGAAGCAAAGAAGTTTGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGATGCAGATGTTTCAAAGAGTGCTCAGCCTACTGAGGAACTTCCACAGAATGGAGTTGCTTCTAAGCAGGCATATATTGGTTCAGATGGATCACAATTCAGCCGAAAACCAGGCTCAGTGTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCAACGGTGCAGAAGATGATATATCCCCATTTGCCCGAGGAGATGAGAAATCCAGAAACATTCAAGTGGATGATGCAAAATCCATTATATCGTCAACAATTAGAAGAAATGCTTAACAATATGAGTGGAAGCCCACAATGGGACGGTCGCCTCATGGATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTCAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCACAAAATCCACTGAGTATCACAAAGTATCAAAACGACAAAGAGGTCATGGACGTTTTCAATAAGATATCTGAACTATTCCCCGGAGTTTCTGGAGCACCATGATAGTTGTAGCTGTTTTAGTACTGAATAGTATAATATGACAAAATGTGAATTTGTGGAAGCTTGAGCATGGTTCCCTCTCCAATTGCAAAATAAGTTGGGGGAAGCCATATCGGTCTTCTAGTTCTCGAAACGAAGTTAGCTGAGTAAGGTCTCACCTGCTTCAATTACATGAAATATATTGGAAATTTTTGGGTGAGCTAATTCTTTTTTCCCTTTCTTAAACTAAAGTTTCCTGTGTATTACTTGCTTTCTCAGGAGATCATGTATTTATTAGTGTTTTGCATTTAATCAGTTTCATAGGAACCTCCTTGTTCACAGTGGTCAGATTGTAAGTAAGAATCTTTTTATGTTCCTTGATATATCAAGGCAGTCGATGTAATTTATATAAGTAATTTTGGCATATTCCTATTTGCTTTAATTGAATGACATTGTTGGAGG

Coding sequence (CDS)

ATGGATAGACTCAATTTAGCCCTAACATCTCCTCCCAAGTTTCTTTTCCTCACTTATTCTTCTGCTTCTTCTATCTCCACTCCCTCCAGAACCAATCAATTATGTGCAACCAGGCGTTTATCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTCTCGCTTCTGCTCTTAATCGTCGACCCAACCACCGTATCCTCGTGGCTGAACGTTTTGCAACGGTTTCTTCTTCTACTACCAGCAATGACTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCCCCCTCCTCATATGTTGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGGTGGCTTCTTACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGTCCGATGAGTAATCCTACACTTTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACGACAGTTACTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGAAGAACCAGTTACTAATGTCAAAACTGGGACAGAGAACATGGAAGCAAAGAAGTTTGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGATGCAGATGTTTCAAAGAGTGCTCAGCCTACTGAGGAACTTCCACAGAATGGAGTTGCTTCTAAGCAGGCATATATTGGTTCAGATGGATCACAATTCAGCCGAAAACCAGGCTCAGTGTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCAACGGTGCAGAAGATGATATATCCCCATTTGCCCGAGGAGATGAGAAATCCAGAAACATTCAAGTGGATGATGCAAAATCCATTATATCGTCAACAATTAGAAGAAATGCTTAACAATATGAGTGGAAGCCCACAATGGGACGGTCGCCTCATGGATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTCAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCACAAAATCCACTGAGTATCACAAAGTATCAAAACGACAAAGAGGTCATGGACGTTTTCAATAAGATATCTGAACTATTCCCCGGAGTTTCTGGAGCACCATGA

Protein sequence

MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRPNHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTEELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP

Homology

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BLAST of IVF0015877 vs. ExPASy Swiss-Prot
Match: Q8GT66 (Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 7.3e-114
Identity = 252/440 (57.27%), Postives = 304/440 (69.09%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASA--LNR 60
           M+ LNLAL S PK L L +SS+ ++ +  R +    T R+S++   S     AS    N 
Sbjct: 1   MENLNLALVSSPKPLLLGHSSSKNVFS-GRKSFTFGTFRVSANSSSSHVTRAASKSHQNL 60

Query: 61  RPNHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTW 120
           +     + A  FA++SSS    +++SVGV     PPP S VGSPLFW+G+GVG SALF+ 
Sbjct: 61  KSVQGKVNAHDFASISSS-NGQETTSVGVSPQLSPPPPSTVGSPLFWIGIGVGFSALFSV 120

Query: 121 VASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATG------------ 180
           VAS +KKYAMQQAFK+MM QMN+QN+P  +   SSG PFP P   A+G            
Sbjct: 121 VASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPFPMPSASGPATPAGFAGNQS 180

Query: 181 -TTVTPSVSEPAASIDVTATKVE---EEPVTNVKTGTE-NMEAKKFAFVDVSPEETDQKS 240
             T T S S+   ++D+ ATKVE     P  NVK   E   E KK AFVDVSPEET QK+
Sbjct: 181 QATSTRSASQSTVTVDIPATKVEAAAPAPDINVKEEVEVKNEPKKSAFVDVSPEETVQKN 240

Query: 241 PFK--EDATDADVSKSAQPTEELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMME 300
            F+  +D  ++   K A+   E  QNG   KQ +  S  S   RK  S LSV+A+EKMME
Sbjct: 241 AFERFKDVDESSSFKEARAPAEASQNGTPFKQGFGDSPSSPSERK--SALSVDALEKMME 300

Query: 301 DPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFD 360
           DPTVQ+M+YP+LPEEMRNP TFKWMMQNP YRQQLE MLNNM G  +WD R+MD+LKNFD
Sbjct: 301 DPTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLNNMGGGTEWDSRMMDTLKNFD 360

Query: 361 LSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDK 420
           L+SP+VKQQFDQIGL+P+EVISKIMANP++AMAFQNPRVQAAIMDCSQNP+SI KYQNDK
Sbjct: 361 LNSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPMSIVKYQNDK 420

[Close]

BLAST of IVF0015877 vs. ExPASy Swiss-Prot
Match: Q9FMD5 (Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 4.7e-105
Identity = 234/443 (52.82%), Postives = 298/443 (67.27%), Query Frame = 0


Query: 10  SPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRPNHR------ 69
           S PK L +  +  SS+  P+  ++      L  S+I       ASA ++ P+ R      
Sbjct: 12  SSPK-LLIGCNFTSSLKNPTGFSRRTPNIVLRCSKIS------ASAQSQSPSSRPENTGE 71

Query: 70  -ILVAER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSYVGSPLFWVGVGVGLSALFTW 129
            ++V +R   FA++ SS+    ++SV  PSV +PPP SS +GSPLFW+GVGVGLSALF++
Sbjct: 72  IVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSALFSY 131

Query: 130 VASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSE--- 189
           V S LKKYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    +P  S+   
Sbjct: 132 VTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQS 191

Query: 190 PAASIDVTATKVEEEPVTNVK-----------------TGTENMEAKKFAFVDVSPEETD 249
             A++DVTATKVE  P T  K                    E  E K +AF D+SPEET 
Sbjct: 192 SGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEETT 251

Query: 250 QKSPFKE--DATDADVSKSAQPTEELPQNGVASKQAYIGSDGSQF--SRKPGSVLSVEAV 309
           ++SPF    + ++ +  K  +  E++ QNG         S+  Q     K G  LSVEA+
Sbjct: 252 KESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLSVEAL 311

Query: 310 EKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDS 369
           EKMMEDPTVQKM+YP+LPEEMRNPETFKWM++NP YRQQL++MLNNMSGS +WD R+ D+
Sbjct: 312 EKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDT 371

Query: 370 LKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITK 418
           LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M+CS+NP++I K
Sbjct: 372 LKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMK 431

[Close]

BLAST of IVF0015877 vs. ExPASy Swiss-Prot
Match: P50503 (Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-06
Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 360 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVS 417
           +++I+++PE+  A Q+P V  A  D +QNP +++KYQN+ +VM++ +K+S  F G S
Sbjct: 312 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGGHS 368

[Close]

BLAST of IVF0015877 vs. ExPASy Swiss-Prot
Match: Q5ZLF0 (Hsc70-interacting protein OS=Gallus gallus OX=9031 GN=ST13 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-06
Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 360 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELF 413
           +++I+++PE+  A Q+P V AA  D +QNP +++KYQN+ +VM +  K+S  F
Sbjct: 305 LNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKF 357

[Close]

BLAST of IVF0015877 vs. ExPASy Swiss-Prot
Match: Q99L47 (Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.6e-06
Identity = 22/57 (38.60%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 360 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVS 417
           +++I+++PE+  A Q+P V  A  D +QNP +++KYQ++ +VM++ +K+S  F G S
Sbjct: 315 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGGQS 371

[Close]

BLAST of IVF0015877 vs. ExPASy TrEMBL
Match: A0A1S3CIG9 (protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 4.7e-225
Identity = 417/419 (99.52%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTVTPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           ELPQNG ASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 ELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 420
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of IVF0015877 vs. ExPASy TrEMBL
Match: A0A1S3CIH5 (protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.4e-221
Identity = 414/419 (98.81%), Postives = 414/419 (98.81%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTVTPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           E   NG ASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 E---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 420
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of IVF0015877 vs. ExPASy TrEMBL
Match: A0A6J1K0V5 (protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489149 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.6e-201
Identity = 375/419 (89.50%), Postives = 394/419 (94.03%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTS PKF+FL YSS SSISTP+RTNQLC +RRL+ SRIK PPRILASA+NRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRS 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRI+VAERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT V+PSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTPMSNSTQPFGSPFPVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVE+EPVTNVK+ TENMEAKKFAFVDVSPEETDQKSPFKE+ATD DVSKSAQ   
Sbjct: 181 DVTATKVEDEPVTNVKSETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQLPV 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           E PQNG ASKQA+ GS+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 EFPQNGAASKQAFNGSEGSQFSRKSGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 420
           SK+MANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKMMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of IVF0015877 vs. ExPASy TrEMBL
Match: A0A6J1FIY5 (protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444690 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 6.2e-201
Identity = 374/419 (89.26%), Postives = 392/419 (93.56%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTS PKF+FL YSS SSISTP+RTNQLC +RRL+ SRIK PPRILASA NRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAANRRS 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRI+VAERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQN+ MSN T   GSPF +PPTFATGT V+PSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVE+EPVTNVK  TENMEAKKFAFVDVSPEETDQKSPFKE+ATD DVSKSAQP+ 
Sbjct: 181 DVTATKVEDEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSV 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           E PQNG ASKQA+ GS+GSQFSRKPG  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 EFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 420
           SK+MANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of IVF0015877 vs. ExPASy TrEMBL
Match: A0A6J1JYZ5 (protein TIC 40, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489149 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.6e-199
Identity = 374/420 (89.05%), Postives = 394/420 (93.81%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTS PKF+FL YSS SSISTP+RTNQLC +RRL+ SRIK PPRILASA+NRR 
Sbjct: 1   MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRS 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRI+VAERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT V+PSVSE AASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNTPMSNSTQPFGSPFPVPPTFATGTAVSPSVSETAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVE+EPVTNVK+ TENMEAKKFAFVDVSPEETDQKSPFKE+ATD DVSKSAQ   
Sbjct: 181 DVTATKVEDEPVTNVKSETENMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQ--- 240

Query: 241 ELP-QNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPE 300
            LP +NG ASKQA+ GS+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPE
Sbjct: 241 -LPVENGAASKQAFNGSEGSQFSRKSGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPE 300

Query: 301 TFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEV 360
           TFKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEV
Sbjct: 301 TFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEV 360

Query: 361 ISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 420
           ISK+MANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 ISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of IVF0015877 vs. NCBI nr
Match: XP_008463124.1 (PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 794 bits (2051), Expect = 3.47e-289
Identity = 417/419 (99.52%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTVTPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           ELPQNG ASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 ELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of IVF0015877 vs. NCBI nr
Match: XP_004148914.1 (protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical protein Csa_023106 [Cucumis sativus])

HSP 1 Score: 783 bits (2022), Expect = 9.11e-285
Identity = 410/419 (97.85%), Postives = 414/419 (98.81%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPKFLFLTYSS SSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSTSSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTT++PSVSEPA SI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTISPSVSEPAVSI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVEEEPVTNVK+ TENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPT+
Sbjct: 181 DVTATKVEEEPVTNVKSRTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTQ 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           ELPQNG ASKQAY GSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 ELPQNGAASKQAYNGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of IVF0015877 vs. NCBI nr
Match: XP_008463125.1 (PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 783 bits (2021), Expect = 1.16e-284
Identity = 414/419 (98.81%), Postives = 414/419 (98.81%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP
Sbjct: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTVTPSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           E   NG ASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 E---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of IVF0015877 vs. NCBI nr
Match: XP_038877065.1 (protein TIC 40, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 751 bits (1939), Expect = 3.75e-272
Identity = 394/419 (94.03%), Postives = 405/419 (96.66%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPK LFLTYSS SSISTP+RT+QLC TRR ++SRI  PPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKILFLTYSSTSSISTPTRTHQLCGTRRFATSRI--PPRIFASAINRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFASVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPMPPTFATGTTVSPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVT TKVEEEPV NVK+GTEN EAKKFAFVDVSPEETDQ SPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTVTKVEEEPVINVKSGTENTEAKKFAFVDVSPEETDQNSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           ELPQNG ASKQA+ GS+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 ELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 417

[Close]

BLAST of IVF0015877 vs. NCBI nr
Match: XP_038877066.1 (protein TIC 40, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 739 bits (1909), Expect = 1.25e-267
Identity = 391/419 (93.32%), Postives = 402/419 (95.94%), Query Frame = 0


Query: 1   MDRLNLALTSPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRP 60
           MDRLNLALTSPPK LFLTYSS SSISTP+RT+QLC TRR ++SRI  PPRI ASA+NRRP
Sbjct: 1   MDRLNLALTSPPKILFLTYSSTSSISTPTRTHQLCGTRRFATSRI--PPRIFASAINRRP 60

Query: 61  NHRILVAERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120
           NHRILVAERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA
Sbjct: 61  NHRILVAERFASVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGVGLSALFTWVA 120

Query: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASI 180
           SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTV+PSVSEPAASI
Sbjct: 121 SYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPMPPTFATGTTVSPSVSEPAASI 180

Query: 181 DVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTE 240
           DVT TKVEEEPV NVK+GTEN EAKKFAFVDVSPEETDQ SPFKEDATDADVSKSAQPTE
Sbjct: 181 DVTVTKVEEEPVINVKSGTENTEAKKFAFVDVSPEETDQNSPFKEDATDADVSKSAQPTE 240

Query: 241 ELPQNGVASKQAYIGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300
           E   NG ASKQA+ GS+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Sbjct: 241 E---NGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360
           FKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301 FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419
           SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP
Sbjct: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 414

[Close]

BLAST of IVF0015877 vs. TAIR 10
Match: AT5G16620.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 382.9 bits (982), Expect = 3.4e-106
Identity = 234/443 (52.82%), Postives = 298/443 (67.27%), Query Frame = 0


Query: 10  SPPKFLFLTYSSASSISTPSRTNQLCATRRLSSSRIKSPPRILASALNRRPNHR------ 69
           S PK L +  +  SS+  P+  ++      L  S+I       ASA ++ P+ R      
Sbjct: 12  SSPK-LLIGCNFTSSLKNPTGFSRRTPNIVLRCSKIS------ASAQSQSPSSRPENTGE 71

Query: 70  -ILVAER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSYVGSPLFWVGVGVGLSALFTW 129
            ++V +R   FA++ SS+    ++SV  PSV +PPP SS +GSPLFW+GVGVGLSALF++
Sbjct: 72  IVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSALFSY 131

Query: 130 VASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSE--- 189
           V S LKKYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    +P  S+   
Sbjct: 132 VTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQS 191

Query: 190 PAASIDVTATKVEEEPVTNVK-----------------TGTENMEAKKFAFVDVSPEETD 249
             A++DVTATKVE  P T  K                    E  E K +AF D+SPEET 
Sbjct: 192 SGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEETT 251

Query: 250 QKSPFKE--DATDADVSKSAQPTEELPQNGVASKQAYIGSDGSQF--SRKPGSVLSVEAV 309
           ++SPF    + ++ +  K  +  E++ QNG         S+  Q     K G  LSVEA+
Sbjct: 252 KESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLSVEAL 311

Query: 310 EKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDS 369
           EKMMEDPTVQKM+YP+LPEEMRNPETFKWM++NP YRQQL++MLNNMSGS +WD R+ D+
Sbjct: 312 EKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDT 371

Query: 370 LKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITK 418
           LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M+CS+NP++I K
Sbjct: 372 LKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMK 431

[Close]

BLAST of IVF0015877 vs. TAIR 10
Match: AT4G22670.1 (HSP70-interacting protein 1 )

HSP 1 Score: 45.1 bits (105), Expect = 1.7e-04
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 361 SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPG 415
           SKI+ +PE+  AF +P V AA+ D  +NP ++ K+Q + +V  V  K+   F G
Sbjct: 386 SKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQANPKVAPVIAKMMGKFAG 439

The following BLAST results are available for this feature:

BLAST of IVF0015877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GT66	7.3e-114	57.27	Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1	[more]
Q9FMD5	4.7e-105	52.82	Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1	[more]
P50503	2.3e-06	40.35	Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1	[more]
Q5ZLF0	5.0e-06	41.51	Hsc70-interacting protein OS=Gallus gallus OX=9031 GN=ST13 PE=2 SV=1	[more]
Q99L47	6.6e-06	38.60	Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1	[more]

BLAST of IVF0015877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIG9	4.7e-225	99.52	protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A1S3CIH5	1.4e-221	98.81	protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A6J1K0V5	1.6e-201	89.50	protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FIY5	6.2e-201	89.26	protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JYZ5	7.6e-199	89.05	protein TIC 40, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of IVF0015877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463124.1	3.47e-289	99.52	PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_004148914.1	9.11e-285	97.85	protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical prote...	[more]
XP_008463125.1	1.16e-284	98.81	PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_038877065.1	3.75e-272	94.03	protein TIC 40, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038877066.1	1.25e-267	93.32	protein TIC 40, chloroplastic isoform X2 [Benincasa hispida]	[more]

BLAST of IVF0015877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16620.1	3.4e-106	52.82	hydroxyproline-rich glycoprotein family protein	[more]
AT4G22670.1	1.7e-04	38.89	HSP70-interacting protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 280..314 e-value: 0.021 score: 24.0 coord: 356..395 e-value: 7.7E-4 score: 28.8
IPR041243	STI1 domain	PFAM	PF17830	STI1	coord: 357..408 e-value: 7.7E-12 score: 45.0
None	No IPR available	GENE3D	1.10.260.100		coord: 356..417 e-value: 1.7E-23 score: 84.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..246
None	No IPR available	PANTHER	PTHR47296:SF1	PROTEIN TIC 40, CHLOROPLASTIC	coord: 1..418
None	No IPR available	PANTHER	PTHR47296	PROTEIN TIC 40, CHLOROPLASTIC	coord: 1..418
IPR038108	RPN13, DEUBAD domain superfamily	GENE3D	1.10.2020.20		coord: 251..355 e-value: 2.3E-10 score: 42.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015877.1	IVF0015877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane