IVF0015740 (gene) Melon (IVF77) v1

Overview


Name	IVF0015740
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr07: 12401124 .. 12401507 (+)
RNA-Seq Expression	IVF0015740
Synteny	IVF0015740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCATAAAGTTGAAGGTTCTAGTTCGAGTCAGAGAGTCGAATTAGAAGCATGGAACCCATTCATTGTTAATGGCAAGAAAATACCCATGACAAAGGAAAATATGAAGATCGTGCTCAGATTACTCCTCGAGGAAAAATTGAGGAGAGAGATTGTGGGGATGGTGAGAAAGGAAATGATGGATAAGGAGGAGAAAGAAAGGAAGATAAGGAGAGAAGAAGAAGATAAGAAAAGAATAGAAGAGGAAGTAAACGAGGGGGAAGTTAAAGAGGAAATACGTGAGATAGATGTCTCCTCGCTCATTGTGGAAATAGAATTTGCAAGGTGGCCAAGAAATCTTAAGGAAGACAGAGAAAGTTCGAACTGGGATTCTCAAAATTAA

mRNA sequence

ATGACCCATAAAGTTGAAGGTTCTAGTTCGAGTCAGAGAGTCGAATTAGAAGCATGGAACCCATTCATTGTTAATGGCAAGAAAATACCCATGACAAAGGAAAATATGAAGATCGTGCTCAGATTACTCCTCGAGGAAAAATTGAGGAGAGAGATTGTGGGGATGGTGAGAAAGGAAATGATGGATAAGGAGGAGAAAGAAAGGAAGATAAGGAGAGAAGAAGAAGATAAGAAAAGAATAGAAGAGGAAGTAAACGAGGGGGAAGTTAAAGAGGAAATACGTGAGATAGATGTCTCCTCGCTCATTGTGGAAATAGAATTTGCAAGGTGGCCAAGAAATCTTAAGGAAGACAGAGAAAGTTCGAACTGGGATTCTCAAAATTAA

Coding sequence (CDS)

ATGACCCATAAAGTTGAAGGTTCTAGTTCGAGTCAGAGAGTCGAATTAGAAGCATGGAACCCATTCATTGTTAATGGCAAGAAAATACCCATGACAAAGGAAAATATGAAGATCGTGCTCAGATTACTCCTCGAGGAAAAATTGAGGAGAGAGATTGTGGGGATGGTGAGAAAGGAAATGATGGATAAGGAGGAGAAAGAAAGGAAGATAAGGAGAGAAGAAGAAGATAAGAAAAGAATAGAAGAGGAAGTAAACGAGGGGGAAGTTAAAGAGGAAATACGTGAGATAGATGTCTCCTCGCTCATTGTGGAAATAGAATTTGCAAGGTGGCCAAGAAATCTTAAGGAAGACAGAGAAAGTTCGAACTGGGATTCTCAAAATTAA

Protein sequence

MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKEMMDKEEKERKIRREEEDKKRIEEEVNEGEVKEEIREIDVSSLIVEIEFARWPRNLKEDRESSNWDSQN

Homology

[Close]

BLAST of IVF0015740 vs. ExPASy TrEMBL
Match: A0A5A7UG34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G001240 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKEM 60
           MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKE 
Sbjct: 1   MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKER 60

Query: 61  MDKEEKERKIRREEEDKKRIEEEVNEGEVKEEIREIDVSSLIVEIEFARWPRNLKEDRES 120
           MDKEEKERK+RREEEDKKRIEEEVNE EVKEEIREIDVSSLIVEIEFARWPRN KEDRES
Sbjct: 61  MDKEEKERKLRREEEDKKRIEEEVNEEEVKEEIREIDVSSLIVEIEFARWPRNPKEDRES 120

Query: 121 SNWDSQN 128
           SNWDSQN
Sbjct: 121 SNWDSQN 127

[Close]

BLAST of IVF0015740 vs. NCBI nr
Match: KAA0053447.1 (hypothetical protein E6C27_scaffold428G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (570), Expect = 3.65e-73
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKEM 60
           MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKE 
Sbjct: 1   MTHKVEGSSSSQRVELEAWNPFIVNGKKIPMTKENMKIVLRLLLEEKLRREIVGMVRKER 60

Query: 61  MDKEEKERKIRREEEDKKRIEEEVNEGEVKEEIREIDVSSLIVEIEFARWPRNLKEDRES 120
           MDKEEKERK+RREEEDKKRIEEEVNE EVKEEIREIDVSSLIVEIEFARWPRN KEDRES
Sbjct: 61  MDKEEKERKLRREEEDKKRIEEEVNEEEVKEEIREIDVSSLIVEIEFARWPRNPKEDRES 120

Query: 121 SNWDSQN 127
           SNWDSQN
Sbjct: 121 SNWDSQN 127

The following BLAST results are available for this feature:

BLAST of IVF0015740 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UG34	3.1e-55	96.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0015740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053447.1	3.65e-73	96.85	hypothetical protein E6C27_scaffold428G001240 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0015740 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015740.1	IVF0015740.1	mRNA