IVF0015577 (gene) Melon (IVF77) v1

Overview
NameIVF0015577
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 12623311 .. 12623607 (+)
RNA-Seq ExpressionIVF0015577
SyntenyIVF0015577
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCGTGCTAGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGGCACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAATTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGGTGTTATCAAGTTTCCGATTGCACCTCATCCTTCTTGTTGTAAAGCCATTTCTAAGCTTAAGGACTGTGCTCCCGATATTTATCAAAAGATTCCTTCTTCTGACATGAATGTGATTAAGAAGACTTGTAGTTTGTAA

mRNA sequence

ATGAAGCTCGTGCTAGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGGCACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAATTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGGTGTTATCAAGTTTCCGATTGCACCTCATCCTTCTTGTTGTAAAGCCATTTCTAAGCTTAAGGACTGTGCTCCCGATATTTATCAAAAGATTCCTTCTTCTGACATGAATGTGATTAAGAAGACTTGTAGTTTGTAA

Coding sequence (CDS)

ATGAAGCTCGTGCTAGTATTTCTTGTCTGCATAGCCATTTTAGCGCCATCGACCACGATGGCCGGCACAACAGCTGCAGCACCTAGTCCATCAGTACCACAAAATTTCCCTTTTCTAAAATGTGCTCCTTTTATTTTAGAAGCAACGTTGTGTGTGACAGGTGTTATCAAGTTTCCGATTGCACCTCATCCTTCTTGTTGTAAAGCCATTTCTAAGCTTAAGGACTGTGCTCCCGATATTTATCAAAAGATTCCTTCTTCTGACATGAATGTGATTAAGAAGACTTGTAGTTTGTAA

Protein sequence

MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL
Homology
BLAST of IVF0015577 vs. ExPASy TrEMBL
Match: A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.3e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query: 1  MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
          MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI
Sbjct: 1  MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 99
          APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

BLAST of IVF0015577 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
           MKLVLVFLVCIAILAPSTTMA TTAAAPSPSVPQNFPFLKCAPFILEATLCVT VIKFPI
Sbjct: 11  MKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPI 70

Query: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 99
           APHPSCCKAISKL DCAP+IYQKIPS DM+VIKK CSL
Sbjct: 71  APHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of IVF0015577 vs. ExPASy TrEMBL
Match: A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
           MK+ L FLV +AILAPS T A T AAAPSP   ++  F  C PFIL+AT+CV  VIKFP+
Sbjct: 12  MKISLTFLVGMAILAPSAT-ATTVAAAPSPLALEDLSFSNCTPFILDATMCVVSVIKFPV 71

Query: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 99
           APHPSCCKAIS L DC+P++YQ IP   M+VIKK CSL
Sbjct: 72  APHPSCCKAISDLNDCSPEVYQHIPG--MDVIKKICSL 106

BLAST of IVF0015577 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-23
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSP---SVPQNFPFLKCAPFILEATLCVTGVIK 60
           ++L LVFLVCI ILAPS T A T A APSP    + Q+  F  CAPFILEAT+C+  VIK
Sbjct: 12  IRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVDVIK 71

Query: 61  FPIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 99
            P+APHPSCCKAIS L DCAP+IYQ IP   M+VIKK C L
Sbjct: 72  LPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

BLAST of IVF0015577 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-22
Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSP---SVPQNFPFLKCAPFILEATLCVTGVIK 60
           ++L LVFLVCI ILAPS T A T A APSP    + Q+  F  CAPFILEAT+C+  VIK
Sbjct: 12  IRLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVDVIK 71

Query: 61  FPIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 99
            P+APHPSCCKAIS L DCAP+IY  IP   M+VIKK C L
Sbjct: 72  LPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

BLAST of IVF0015577 vs. NCBI nr
Match: TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 1.45e-63
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query: 1  MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
          MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI
Sbjct: 1  MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60

Query: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
          APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

BLAST of IVF0015577 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (462), Expect = 1.78e-57
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
           MKLVLVFLVCIAILAPSTTMA TTAAAPSPSVPQNFPFLKCAPFILEATLCVT VIKFPI
Sbjct: 11  MKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPI 70

Query: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
           APHPSCCKAISKL DCAP+IYQKIPS DM+VIKK CSL
Sbjct: 71  APHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of IVF0015577 vs. NCBI nr
Match: KAA0050068.1 (hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 4.07e-33
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
           MK+ L FLV +AILAPS T A T AAAPSP   ++  F  C PFIL+AT+CV  VIKFP+
Sbjct: 12  MKISLTFLVGMAILAPSAT-ATTVAAAPSPLALEDLSFSNCTPFILDATMCVVSVIKFPV 71

Query: 61  APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
           APHPSCCKAIS L DC+P++YQ IP   M+VIKK CSL
Sbjct: 72  APHPSCCKAISDLNDCSPEVYQHIPG--MDVIKKICSL 106

BLAST of IVF0015577 vs. NCBI nr
Match: TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (295), Expect = 5.16e-32
Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query: 2   KLVLVFLVCIAILAPSTTMAGTTAAAPSPSV---PQNFPFLKCAPFILEATLCVTGVIKF 61
           +L LVFLVCI ILAPS T A T A APSP +    Q+  F  CAPFILEAT+C+  VIK 
Sbjct: 13  RLALVFLVCIVILAPSVT-AHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVDVIKL 72

Query: 62  PIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
           P+APHPSCCKAIS L DCAP+IYQ IP   M+VIKK C L
Sbjct: 73  PVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

BLAST of IVF0015577 vs. NCBI nr
Match: KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])

HSP 1 Score: 117 bits (292), Expect = 1.39e-31
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 0

Query: 1   MKLVLVFLVCIAILAPSTTMAGTTAAAPS--PSVPQNFPFLKCAPFILEATLCVTGVIKF 60
           MKL LVF+V IAILA S T   T  ++ +  PS+ Q+  F  C PFIL+ATLC+  V KF
Sbjct: 8   MKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLCLVDVFKF 67

Query: 61  PIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
           PIAPHP CCKAI KL DCAP ++Q IPS+DM+V+K  C+L
Sbjct: 68  PIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNICAL 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGK99.3e-47100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U9A13.1e-4292.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4751.1e-2364.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CGL77.1e-2364.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4A72.7e-2263.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK10334.11.45e-63100.00hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa][more]
KAA0050069.11.78e-5792.86hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... [more]
KAA0050068.14.07e-3364.29hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa][more]
TYK10344.15.16e-3265.00hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa][more]
KAE8653023.11.39e-3158.00hypothetical protein Csa_023561, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0015577.2IVF0015577.2mRNA