IVF0015276 (gene) Melon (IVF77) v1

Overview


Name	IVF0015276
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr04: 31336325 .. 31339161 (-)
RNA-Seq Expression	IVF0015276
Synteny	IVF0015276

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGACCCTTCGCTGTCGAAATCCCACGCAATTGTTTTTAAACCTCTATTTTCATCTGCTGCGAATCCTCTCTCCTTGAAGAAGACCAAAGCGTTTATGAACAAGTTCGCTATCTTTTCTTCCTTTCCAGGGAGGTCAGTTTCGGATTCTTAAGTTTATCGGCGTTCGTTGATTTTCCAACGTCGAATTCTAATCGGTAATTTCAATCTCTTTATCAAAACTTTATATAAATAGGGTTTATTCTGTTAAAAAGTTAGTGTTATTCTTTGGATCGATCAATTGATGGATTTGATGGGATCGACTTTTTTTTTGTGTGTTACAGATGCAATTGCTTTATGTGGGTTCGGGCTCAGGCCTTAGATTCGGTCTGTTGTAGAATTTAGGTCGTTGCCTTCTCTGTATCCGGTTGTTCATCGATTTCCTGCTGCTGCGATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGTGAGGATCGCTCCCCTTTCAATCGTTTCATTGTGCTGCGCGATCCTTCTAACTCGGGCGTTGTTAGTAATAATGGTATTGGAGCTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTTCGTCCTTTACCTTCCAATATATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAGTTGGCGGAACTGGAGGTGAATGCGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCCATGTGCCTATGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCATGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGAAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTCCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACATGGGAGTCAAGCGGGAGAAGATCAGTTGAAAGTGGTGGATTTCGTCGCCTTTTTCGCAATTTATTCTCCTTTCTTGGGAGGTTTAGAAGTTCATCCCGTCATTCTGGTTCTGGACCTGGTTCAATGAGACGGAGCTTCTCTGCTAGGTTATTCAACAGACGCTCAAGGAGGAATAATCAACCTATAGCGTCAGACATAAACTATATGTTTTCTGCTTAATTGTACTCATAGAGGTTGATTCCCACCCTTAACCCTTACTCCCTCTAGAAATTCTGAGCGATATTGAACCCATATAACAGTCTTCCTTTGGGCGATGGTGTAGATGTACAATTTTTGTTTATTAGCTGTATAGATACATCAACAAGAAATACGGAATTCGGTAACTTAAATGTAGTTGACTGGAGAATTTTTGACATGGTGGGACAAGGATATTTAGAGATAAATGATGGAGAGAGTCGTATGATCTGCCTGGACGAGGGTTAATGGCATATCAGTTCGAGCATGTGAATGTCTTCTGTTGTTTGATGTTAGAAGGAAAGAGATGGGTTAGGGAGTTCCTGTTGATGTCTAGTAGGTTCTTTTTTTTTTCTCTTGTGCAATGTAACATAGTAACTTCGCTGCAAAGCAGCTCTTATCCTTAGAATACGAAAATCTTCTGTTTTTTGTTATGTTTCTATCTTTATCCCTTCTTGATTTTAACTTTTGAGTTAAATTCCATCTCTCTGACTTTGCTTTGTGGTATTCTGTTTCTGTTGTATGATAATTCTTATGGAACTCCTATGCTCTCTCTCATTGCCTTCTTTTTCGGCTGTTACTTAATTACTTTCTTCACTTGAAATTTATAGCTTCTCTCACAAATTTGAGCTCATTCAAGTATCAAAATTACACCCATCTCATACCATATTTCTATCTCTGAAGGAGGATTTTTTCCCTTTTAAGGAGGGTAGATTGACAAAGCTGATAGGGTGAGACAATTTAATAACTCAGGTCAGATGAATTATACATTGAAGAACTCTCACCCAGGGCCAGTGCTTTGTTTATAACAAGATGATTAATGTGTTGCTATCAAAACTTTGCTGGTTCACTAAAAAAAACTCTTGGTCCTTGAAAGTAGGCTTTTACTAGTTTTAGCTTTAATGCACATTTGTATGTCAACCACGAACTCCATTTTTCTTACTTGATGCATGTGCAACTTTAGCAGCTTTCTAAGTTCATATCAAAGCAAATGTACCTTTATTCCTATTGTAATTCCTTTTCTGCTTTCCTCTTTTATGAATTGTCAAAAATATGGACAGGAAAGTAAGCTGAGCACCAACAGGTTGTACCCCTTTTTCATGTCTTGAAAATGAACTACCAGGACACAAATCAGATGATGATTGTTGGGAGAAGGAATGTAAGATTATTCGTTCTGTTTGATATAAGAGATGTAAGTTCACATGTCTTACAACTTTTTGAAATTTGTGTGTCGCTTATGTGCAGATTCCTGTATGTCATTAGTGGCATTTGTAAGCTACAATTGTTGAATTTTTGTATTATTATCTTAAAAGGAAATGACAAAAGGTATAATCAAATCAAGCTGAACCTAAAAGAAGGTACAGGTTTTTAGTATTATGCATGAAGAAGGTTTTTCATGTCTCTTCTGCCATTTGGATTTTGTCTGTGACAAGGGACTAG

mRNA sequence

ACGACCCTTCGCTGTCGAAATCCCACGCAATTGTTTTTAAACCTCTATTTTCATCTGCTGCGAATCCTCTCTCCTTGAAGAAGACCAAAGCGTTTATGAACAAGTTCGCTATCTTTTCTTCCTTTCCAGGGAGGTCAGTTTCGGATTCTTAAGTTTATCGGCGTTCGTTGATTTTCCAACGTCGAATTCTAATCGATGCAATTGCTTTATGTGGGTTCGGGCTCAGGCCTTAGATTCGGTCTGTTGTAGAATTTAGGTCGTTGCCTTCTCTGTATCCGGTTGTTCATCGATTTCCTGCTGCTGCGATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGTGAGGATCGCTCCCCTTTCAATCGTTTCATTGTGCTGCGCGATCCTTCTAACTCGGGCGTTGTTAGTAATAATGGTATTGGAGCTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTTCGTCCTTTACCTTCCAATATATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAGTTGGCGGAACTGGAGGTGAATGCGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCCATGTGCCTATGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCATGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGAAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTCCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACATGGGAGTCAAGCGGGAGAAGATCAGTTGAAAGTGGTGGATTTCGTCGCCTTTTTCGCAATTTATTCTCCTTTCTTGGGAGGTTTAGAAGTTCATCCCGTCATTCTGGTTCTGGACCTGGTTCAATGAGACGGAGCTTCTCTGCTAGGTTATTCAACAGACGCTCAAGGAGGAATAATCAACCTATAGCGTCAGACATAAACTATATGTTTTCTGCTTAATTGTACTCATAGAGGTTGATTCCCACCCTTAACCCTTACTCCCTCTAGAAATTCTGAGCGATATTGAACCCATATAACAGTCTTCCTTTGGGCGATGGTGTAGATGTACAATTTTTGTTTATTAGCTGTATAGATACATCAACAAGAAATACGGAATTCGGTAACTTAAATGTAGTTGACTGGAGAATTTTTGACATGGTGGGACAAGGATATTTAGAGATAAATGATGGAGAGAGTCGTATGATCTGCCTGGACGAGGGTTAATGGCATATCAGTTCGAGCATGTGAATGTCTTCTGTTGTTTGATGTTAGAAGGAAAGAGATGGGTTAGGGAGTTCCTGTTGATGTCTAGTAGGTTCTTTTTTTTTTCTCTTGTGCAATGTAACATAGTAACTTCGCTGCAAAGCAGCTCTTATCCTTAGAATACGAAAATCTTCTGTTTTTTGTTATGTTTCTATCTTTATCCCTTCTTGATTTTAACTTTTGAGTTAAATTCCATCTCTCTGACTTTGCTTTGTGGTATTCTGTTTCTGTTGTATGATAATTCTTATGGAACTCCTATGCTCTCTCTCATTGCCTTCTTTTTCGGCTGTTACTTAATTACTTTCTTCACTTGAAATTTATAGCTTCTCTCACAAATTTGAGCTCATTCAAGTATCAAAATTACACCCATCTCATACCATATTTCTATCTCTGAAGGAGGATTTTTTCCCTTTTAAGGAGGGTAGATTGACAAAGCTGATAGGGAAAGTAAGCTGAGCACCAACAGGTTGTACCCCTTTTTCATGTCTTGAAAATGAACTACCAGGACACAAATCAGATGATGATTGTTGGGAGAAGGAATGTAAGATTATTCGTTCTGTTTGATATAAGAGATGTAAGTTCACATGTCTTACAACTTTTTGAAATTTGTGTGTCGCTTATGTGCAGATTCCTGTATGTCATTAGTGGCATTTGTAAGCTACAATTGTTGAATTTTTGTATTATTATCTTAAAAGGAAATGACAAAAGGTATAATCAAATCAAGCTGAACCTAAAAGAAGGTACAGGTTTTTAGTATTATGCATGAAGAAGGTTTTTCATGTCTCTTCTGCCATTTGGATTTTGTCTGTGACAAGGGACTAG

Coding sequence (CDS)

ATGTACCACGATGATGCTTCTGGCCCAAACCCTTCTTTCGTGCCAAGATTGCGTCGCAGTGGAAGAAATGGTGAGGATCGCTCCCCTTTCAATCGTTTCATTGTGCTGCGCGATCCTTCTAACTCGGGCGTTGTTAGTAATAATGGTATTGGAGCTGGAGGAAATTATGAGATTTTTTGTGACGATGGTACTGGGGCGAGCCTTCGTCCTTTACCTTCCAATATATCCGAGTTCTTGATGGGATCGGGGTTCGATCGTCTTCTCAATCAGTTGGCGGAACTGGAGGTGAATGCGGTTAGCCCATTGGAAAACCCACCGGCTTCGAAGGCTGCGATTGAATCTTTGCCTGTGGTTAAGATTCTTGCTAGCCATGTGCCTATGGAATCACATTGTGCGGTCTGTAAGGAACCATTTGAGCTCGACTCTGAGGCTCGAGAGATGCCGTGTAAGCATATTTACCATTTGGATTGTATACTCCCTTGGCTTTCTATCCGGAATTCATGTCCTGTTTGTCGGCACCAATTGCCTACCGATGTGCATAGCAGTGGAAGGAACTCCCCTGCTTCTGCTGAAGAAGTTGTTGGACTAACAATTTGGAGGCTCCCCGGTAGGGGTTTTGCTGTTGGAAGGTTTACTTGGGGCAGGGGAGCTGCAGAACATGACCTTCCTGTTGTTTACACTGAAATTGATGGTGGGTTTAGTACCACCAGTGGTATTCCTAGGAGGATTACATGGGAGTCAAGCGGGAGAAGATCAGTTGAAAGTGGTGGATTTCGTCGCCTTTTTCGCAATTTATTCTCCTTTCTTGGGAGGTTTAGAAGTTCATCCCGTCATTCTGGTTCTGGACCTGGTTCAATGAGACGGAGCTTCTCTGCTAGGTTATTCAACAGACGCTCAAGGAGGAATAATCAACCTATAGCGTCAGACATAAACTATATGTTTTCTGCTTAA

Protein sequence

MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFCDDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSRRNNQPIASDINYMFSA

Homology

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BLAST of IVF0015276 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.7e-62
Identity = 144/300 (48.00%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 16  RLRRSGRNGEDRSPFNRFIVLRDPSNSG----VVSNNGIGAGGN---YEIFCDDGTGASL 75
           R RRS R    R+ FN  IVL      G    V +  G GA      YE + DDG+G+ L
Sbjct: 95  RRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGL 154

Query: 76  RPLPSNISEFLMGSGFDRLLNQLAELEV--NAVSPLENPPASKAAIESLPVVKILASHVP 135
           RPLP ++SE LMGSGF+RLL QL+++E   N +    NPPASK+AIESLP V+I   H  
Sbjct: 155 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 214

Query: 136 MESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 195
            E++CAVC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP+D        
Sbjct: 215 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNEE 274

Query: 196 PASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITW- 255
               E  VG+TIWRLPG GFAVGRF  G    E  LPVV TE+DGG   ++  PRRI+W 
Sbjct: 275 ----EHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWV 334

Query: 256 --------ESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNR 298
                     +G RS   G  RR  R + SF+ R R S   S S    +      R+ NR
Sbjct: 335 RAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of IVF0015276 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.2e-61
Identity = 135/288 (46.88%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 10  NPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGN--YEIFCDDGTGAS 69
           N   V R RRSGR    R  FN  IVL+  +        G  A     +E + DDG+G+ 
Sbjct: 78  NRRSVIRRRRSGR----RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSG 137

Query: 70  LRPLPSNISEFLMGSGFDRLLNQLAELEVNA--VSPLENPPASKAAIESLPVVKILASHV 129
           LRPLP ++SE LMGSGF+RLL QL+++E +A  +    NPPASK+AIESLP V+I   H+
Sbjct: 138 LRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI 197

Query: 130 PMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRN 189
             E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP++ +    N
Sbjct: 198 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNN 257

Query: 190 SPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGIPRRIT 249
           +    +  VG+TIWRLPG GFAVGRF       E  LPVV TE+D GG   +   PRRI+
Sbjct: 258 N--EEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 317

Query: 250 W-----------ESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGS 282
           W             +G  S   G  RR+ R + S + R R +   S S
Sbjct: 318 WVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

[Close]

BLAST of IVF0015276 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.0e-60
Identity = 153/334 (45.81%), Postives = 201/334 (60.18%), Query Frame = 0


Query: 3   HDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPS---NSGVVSNNGIGAGGNYEIF 62
           H D S P P+ V R R       +RSP N  IVLR  +   +S VVS  G+     ++++
Sbjct: 75  HADNS-PTPTIVTRTR------SNRSP-NPVIVLRGSAAAPSSDVVS-EGLDRSA-FQMY 134

Query: 63  CDDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNA---VSPLENPPASKAAIESLP 122
            DDGT + LRPLP +++EFL+GSGFDRLL+Q++++E+N    +   E+PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILASHV--PMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQ 182
           +++I  +H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTDVHSSGRNS-----PASAEE----VVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVV 242
           LP +  + G  +      A+AEE      GLTIWRLPG GFAVGR   G    +  +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGGFSTTSGIPRRITWES------SGRRSVESGGFR-RLFRNLFSFLGRFRS--SS 302
           YTE+DGG      +PRR+ W S       G      GGF  R+ R    F G   S  ++
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

Query: 303 RHSGSGPGS----MRRSFSARLF---NRRSRRNN 304
             + SG GS     RR+ S  +F   +  SRR N
Sbjct: 375 AAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRN 398

[Close]

BLAST of IVF0015276 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-29
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 71  LPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHVPME-S 130
           LP+NI ++ +G G ++L+ QLAE + N       PPASK+AIE+LP+V I  S++  E +
Sbjct: 166 LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPPASKSAIEALPLVNITKSNLNSEFN 225

Query: 131 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTD 179
            CAVC + FE  +EA++MPCKH+YH DC+LPWL + NSCPVCRH+LPTD
Sbjct: 226 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271

[Close]

BLAST of IVF0015276 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26
Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 11  PSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFCDDGTGASLRP 70
           PS  P+ R + +N +    F+ F  L++   +   S      G ++E   ++        
Sbjct: 105 PSMQPQARSTQQNPQS-DAFDPFTFLQNHLQTLRSS------GTHFEFVIENHPSDPGNR 164

Query: 71  LPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHVPME-S 130
           +P N  ++  G G ++L+ QLAE + N       PPASK+AI++LP VK+    +  E +
Sbjct: 165 MPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAIDALPTVKVTKDMLKSEMN 224

Query: 131 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTD 179
            CAVC + FE  S+ ++MPCKH++H DC+LPWL + NSCPVCR +LPTD
Sbjct: 225 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of IVF0015276 vs. ExPASy TrEMBL
Match: A0A1S3B6J2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.1e-181
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR
Sbjct: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300

Query: 301 RNNQPIASDINYMFSA 317
           RNNQPIASDINYMFSA
Sbjct: 301 RNNQPIASDINYMFSA 316

[Close]

BLAST of IVF0015276 vs. ExPASy TrEMBL
Match: A0A5A7TL92 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001550 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.1e-181
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC
Sbjct: 30  MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 89

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI
Sbjct: 90  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 149

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 150 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 209

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 210 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 269

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR
Sbjct: 270 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 329

Query: 301 RNNQPIASDINYMFSA 317
           RNNQPIASDINYMFSA
Sbjct: 330 RNNQPIASDINYMFSA 345

[Close]

BLAST of IVF0015276 vs. ExPASy TrEMBL
Match: A0A0A0LFJ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.1e-173
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300

Query: 301 RNNQPIASDINYMFSA 317
           RNNQPIASDINY FSA
Sbjct: 301 RNNQPIASDINYTFSA 316

[Close]

BLAST of IVF0015276 vs. ExPASy TrEMBL
Match: A0A6J1CXJ7 (probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC111015120 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 269/308 (87.34%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDAS P+PSFVPRLRRS RNGEDR+PFNR IVLRDPSN+G +SNNGIGAGGNYEI+ 
Sbjct: 1   MYHDDASDPDPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTG++LRPLPSNISEFLMGSGFDRLLNQLA+LEVN V  LE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGSTLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVP+ESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPTD H
Sbjct: 121 LASHVPVESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRI+W SSGRRS E GGFRR+FRN FSF GRFRSSS HS SG G MRRSFS+ LFNRRSR
Sbjct: 241 RRISWASSGRRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTGLMRRSFSSTLFNRRSR 300

Query: 301 RNNQPIAS 309
           RNN   AS
Sbjct: 301 RNNHLTAS 308

[Close]

BLAST of IVF0015276 vs. ExPASy TrEMBL
Match: A0A6J1J964 (E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC111482444 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 266/316 (84.18%), Postives = 280/316 (88.61%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           M HDDAS  +PSFVPRLRRS RNGEDRS FNR IVLRDPSNSG +SNNG+G GGNYEI+ 
Sbjct: 1   MNHDDASDLDPSFVPRLRRSRRNGEDRSSFNRIIVLRDPSNSGAISNNGVGGGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLR LPSNISEFLMGSG DRLLNQLA+LEVN V PLE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRSLPSNISEFLMGSGIDRLLNQLAQLEVNGVGPLEHPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVP+ESHCAVCKEPFELDSEAR+MPCKHIYH DCI PWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPLESHCAVCKEPFELDSEARQMPCKHIYHSDCICPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTT G+P
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTIGVP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           R ITW SSG RS ESGGFR +FRN FSF GRFRS+SR SGS  G +RRSFS  LFNRRSR
Sbjct: 241 RSITWASSGIRSSESGGFRSIFRNFFSFFGRFRSTSRRSGSVTGLIRRSFSTTLFNRRSR 300

Query: 301 RNNQPIASDINYMFSA 317
           RNN  + SD NY FSA
Sbjct: 301 RNNHSMVSDANYTFSA 316

[Close]

BLAST of IVF0015276 vs. NCBI nr
Match: XP_008442524.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008442525.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 642 bits (1656), Expect = 1.81e-232
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR
Sbjct: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300

Query: 301 RNNQPIASDINYMFSA 316
           RNNQPIASDINYMFSA
Sbjct: 301 RNNQPIASDINYMFSA 316

[Close]

BLAST of IVF0015276 vs. NCBI nr
Match: KAA0044102.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK25035.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 642 bits (1656), Expect = 5.37e-232
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC
Sbjct: 30  MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 89

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI
Sbjct: 90  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 149

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 150 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 209

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 210 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 269

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR
Sbjct: 270 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 329

Query: 301 RNNQPIASDINYMFSA 316
           RNNQPIASDINYMFSA
Sbjct: 330 RNNQPIASDINYMFSA 345

[Close]

BLAST of IVF0015276 vs. NCBI nr
Match: XP_004137779.1 (E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN58856.1 hypothetical protein Csa_000939 [Cucumis sativus])

HSP 1 Score: 613 bits (1580), Expect = 7.00e-221
Identity = 300/316 (94.94%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDASGPNPSFVPRLRRSGRNGEDRS FNR IVLRDPSNSGVVSNNGIG GGNYEIFC
Sbjct: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSSFNRIIVLRDPSNSGVVSNNGIGGGGNYEIFC 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSN+SEFLMGSGFDRLLNQLA+LEVN VSPLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNVSEFLMGSGFDRLLNQLAQLEVNGVSPLENPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LA+HV +ESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH
Sbjct: 121 LANHVRVESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
           SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITWESSGRRS ESGGFR +FRNLFSF GRFRSSSRHSGSGPGS+RRSFSARLFNR SR
Sbjct: 241 RRITWESSGRRSSESGGFRSVFRNLFSFFGRFRSSSRHSGSGPGSVRRSFSARLFNRHSR 300

Query: 301 RNNQPIASDINYMFSA 316
           RNNQPIASDINY FSA
Sbjct: 301 RNNQPIASDINYTFSA 316

[Close]

BLAST of IVF0015276 vs. NCBI nr
Match: XP_038906308.1 (E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida])

HSP 1 Score: 585 bits (1507), Expect = 9.36e-210
Identity = 287/316 (90.82%), Postives = 295/316 (93.35%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDAS P+PSFVPRLRRSGRNGEDRSPFNR IVLRDPSNSG + NNGIGAGGNYEI+ 
Sbjct: 1   MYHDDASDPDPSFVPRLRRSGRNGEDRSPFNRIIVLRDPSNSGAIGNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTGASLRPLPSNISEFLMGSGFDRLLNQLA+LEVN V PLENPPASKAAIESLPVVKI
Sbjct: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGPLENPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVPMESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLP+DVH
Sbjct: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPSDVH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSG+P
Sbjct: 181 ISGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGVP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRITW SSGRRS ESGGFRR+FRN FSF  RFRSSSRHSGSG G MRRSFSA LFNRRSR
Sbjct: 241 RRITWASSGRRSSESGGFRRIFRNFFSFFRRFRSSSRHSGSGHGLMRRSFSATLFNRRSR 300

Query: 301 RNNQPIASDINYMFSA 316
           RNNQPIASD NY  SA
Sbjct: 301 RNNQPIASDTNYTLSA 316

[Close]

BLAST of IVF0015276 vs. NCBI nr
Match: XP_022145737.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 550 bits (1416), Expect = 5.13e-196
Identity = 269/308 (87.34%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MYHDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFC 60
           MYHDDAS P+PSFVPRLRRS RNGEDR+PFNR IVLRDPSN+G +SNNGIGAGGNYEI+ 
Sbjct: 1   MYHDDASDPDPSFVPRLRRSRRNGEDRAPFNRIIVLRDPSNAGAISNNGIGAGGNYEIYY 60

Query: 61  DDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKI 120
           DDGTG++LRPLPSNISEFLMGSGFDRLLNQLA+LEVN V  LE+PPASKAAIESLPVVKI
Sbjct: 61  DDGTGSTLRPLPSNISEFLMGSGFDRLLNQLAQLEVNGVGSLEHPPASKAAIESLPVVKI 120

Query: 121 LASHVPMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVH 180
           LASHVP+ESHCAVCKEPFELDSEAREMPCKHIYH DCILPWLSIRNSCPVCRHQLPTD H
Sbjct: 121 LASHVPVESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHQLPTDGH 180

Query: 181 SSGRNSPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240
            SGR+SPASAEEVVGLTIWRLPG GFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP
Sbjct: 181 GSGRSSPASAEEVVGLTIWRLPGGGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIP 240

Query: 241 RRITWESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNRRSR 300
           RRI+W SSGRRS E GGFRR+FRN FSF GRFRSSS HS SG G MRRSFS+ LFNRRSR
Sbjct: 241 RRISWASSGRRSSEGGGFRRVFRNFFSFFGRFRSSSHHSSSGTGLMRRSFSSTLFNRRSR 300

Query: 301 RNNQPIAS 308
           RNN   AS
Sbjct: 301 RNNHLTAS 308

[Close]

BLAST of IVF0015276 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-63
Identity = 144/300 (48.00%), Postives = 174/300 (58.00%), Query Frame = 0


Query: 16  RLRRSGRNGEDRSPFNRFIVLRDPSNSG----VVSNNGIGAGGN---YEIFCDDGTGASL 75
           R RRS R    R+ FN  IVL      G    V +  G GA      YE + DDG+G+ L
Sbjct: 95  RRRRSNR----RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGL 154

Query: 76  RPLPSNISEFLMGSGFDRLLNQLAELEV--NAVSPLENPPASKAAIESLPVVKILASHVP 135
           RPLP ++SE LMGSGF+RLL QL+++E   N +    NPPASK+AIESLP V+I   H  
Sbjct: 155 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 214

Query: 136 MESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 195
            E++CAVC E FE   E REMPCKHI+H DCI+PWLSIRNSCPVCR +LP+D        
Sbjct: 215 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNEE 274

Query: 196 PASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEIDGGFSTTSGIPRRITW- 255
               E  VG+TIWRLPG GFAVGRF  G    E  LPVV TE+DGG   ++  PRRI+W 
Sbjct: 275 ----EHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRISWV 334

Query: 256 --------ESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGSGPGSMRRSFSARLFNR 298
                     +G RS   G  RR  R + SF+ R R S   S S    +      R+ NR
Sbjct: 335 RAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNR 386

[Close]

BLAST of IVF0015276 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-62
Identity = 135/288 (46.88%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 10  NPSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGN--YEIFCDDGTGAS 69
           N   V R RRSGR    R  FN  IVL+  +        G  A     +E + DDG+G+ 
Sbjct: 78  NRRSVIRRRRSGR----RPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSG 137

Query: 70  LRPLPSNISEFLMGSGFDRLLNQLAELEVNA--VSPLENPPASKAAIESLPVVKILASHV 129
           LRPLP ++SE LMGSGF+RLL QL+++E +A  +    NPPASK+AIESLP V+I   H+
Sbjct: 138 LRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI 197

Query: 130 PMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRN 189
             E++CAVC E FE ++EAREMPCKH++H DCI+PWLSIRNSCPVCR +LP++ +    N
Sbjct: 198 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNN 257

Query: 190 SPASAEEVVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVVYTEID-GGFSTTSGIPRRIT 249
           +    +  VG+TIWRLPG GFAVGRF       E  LPVV TE+D GG   +   PRRI+
Sbjct: 258 N--EEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 317

Query: 250 W-----------ESSGRRSVESGGFRRLFRNLFSFLGRFRSSSRHSGS 282
           W             +G  S   G  RR+ R + S + R R +   S S
Sbjct: 318 WVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSS 359

[Close]

BLAST of IVF0015276 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 232.6 bits (592), Expect = 4.2e-61
Identity = 153/334 (45.81%), Postives = 201/334 (60.18%), Query Frame = 0


Query: 3   HDDASGPNPSFVPRLRRSGRNGEDRSPFNRFIVLRDPS---NSGVVSNNGIGAGGNYEIF 62
           H D S P P+ V R R       +RSP N  IVLR  +   +S VVS  G+     ++++
Sbjct: 75  HADNS-PTPTIVTRTR------SNRSP-NPVIVLRGSAAAPSSDVVS-EGLDRSA-FQMY 134

Query: 63  CDDGTGASLRPLPSNISEFLMGSGFDRLLNQLAELEVNA---VSPLENPPASKAAIESLP 122
            DDGT + LRPLP +++EFL+GSGFDRLL+Q++++E+N    +   E+PPASK+AIE+LP
Sbjct: 135 YDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALP 194

Query: 123 VVKILASHV--PMESHCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQ 182
           +++I  +H+    +SHCAVCKE F L S AREMPC HIYH DCILPWL+IRNSCPVCRH+
Sbjct: 195 LIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHE 254

Query: 183 LPTDVHSSGRNS-----PASAEE----VVGLTIWRLPGRGFAVGRFTWGRGAAEHDLPVV 242
           LP +  + G  +      A+AEE      GLTIWRLPG GFAVGR   G    +  +PVV
Sbjct: 255 LPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVV 314

Query: 243 YTEIDGGFSTTSGIPRRITWES------SGRRSVESGGFR-RLFRNLFSFLGRFRS--SS 302
           YTE+DGG      +PRR+ W S       G      GGF  R+ R    F G   S  ++
Sbjct: 315 YTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFSGSSGSIAAA 374

Query: 303 RHSGSGPGS----MRRSFSARLF---NRRSRRNN 304
             + SG GS     RR+ S  +F   +  SRR N
Sbjct: 375 AAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRN 398

[Close]

BLAST of IVF0015276 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27
Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 11  PSFVPRLRRSGRNGEDRSPFNRFIVLRDPSNSGVVSNNGIGAGGNYEIFCDDGTGASLRP 70
           PS  P+ R + +N +    F+ F  L++   +   S      G ++E   ++        
Sbjct: 105 PSMQPQARSTQQNPQS-DAFDPFTFLQNHLQTLRSS------GTHFEFVIENHPSDPGNR 164

Query: 71  LPSNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHVPME-S 130
           +P N  ++  G G ++L+ QLAE + N       PPASK+AI++LP VK+    +  E +
Sbjct: 165 MPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAIDALPTVKVTKDMLKSEMN 224

Query: 131 HCAVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTD 179
            CAVC + FE  S+ ++MPCKH++H DC+LPWL + NSCPVCR +LPTD
Sbjct: 225 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

[Close]

BLAST of IVF0015276 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 6.4e-25
Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 73  SNISEFLMGSGFDRLLNQLAELEVNAVSPLENPPASKAAIESLPVVKILASHV-PMESHC 132
           +N  ++  G G + L+ QL+    +       PPA K++I++LP +KI   H+   +SHC
Sbjct: 131 TNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHC 190

Query: 133 AVCKEPFELDSEAREMPCKHIYHLDCILPWLSIRNSCPVCRHQLPTDVHSSGRNS 187
            VCK+ FEL SEA++MPC HIYH DCI+PWL   NSCPVCR +LP+   SS   S
Sbjct: 191 PVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQS 241

The following BLAST results are available for this feature:

BLAST of IVF0015276 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	1.7e-62	48.00	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	3.2e-61	46.88	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
O22283	6.0e-60	45.81	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
P0CH30	3.2e-29	54.13	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	3.3e-26	37.28	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of IVF0015276 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6J2	1.1e-181	100.00	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103486374 P...	[more]
A0A5A7TL92	1.1e-181	100.00	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LFJ3	7.1e-173	94.94	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734090 P...	[more]
A0A6J1CXJ7	1.3e-153	87.34	probable E3 ubiquitin-protein ligase RHC2A OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1J964	1.3e-150	84.18	E3 ubiquitin-protein ligase RDUF1-like OS=Cucurbita maxima OX=3661 GN=LOC1114824...	[more]

BLAST of IVF0015276 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442524.1	1.81e-232	100.00	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008442525.1...	[more]
KAA0044102.1	5.37e-232	100.00	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK25035.1 E3...	[more]
XP_004137779.1	7.00e-221	94.94	E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN58856.1 hypothetical pro...	[more]
XP_038906308.1	9.36e-210	90.82	E3 ubiquitin-protein ligase RDUF1-like [Benincasa hispida]	[more]
XP_022145737.1	5.13e-196	87.34	probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia]	[more]

BLAST of IVF0015276 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	1.2e-63	48.00	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	2.2e-62	46.88	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	4.2e-61	45.81	RING-H2 finger C2A	[more]
AT3G19950.1	2.3e-27	37.28	RING/U-box superfamily protein	[more]
AT3G56580.2	6.4e-25	46.09	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..171 e-value: 3.2E-7 score: 40.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 130..172 e-value: 1.5E-10 score: 41.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..172 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 95..179 e-value: 4.7E-20 score: 73.0
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 194..283 e-value: 1.3E-33 score: 115.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR15710:SF61	E3 UBIQUITIN-PROTEIN LIGASE RHC2A-RELATED	coord: 14..260
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 14..260
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 131..172 e-value: 3.2325E-23 score: 88.1436
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015276.1	IVF0015276.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity