IVF0015256 (gene) Melon (IVF77) v1

Overview


Name	IVF0015256
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr04: 23097199 .. 23097483 (-)
RNA-Seq Expression	IVF0015256
Synteny	IVF0015256

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGATCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAGGATCGATGTCGACAACCAGCTCGAAATTGA

mRNA sequence

ATGACAATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGATCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAGGATCGATGTCGACAACCAGCTCGAAATTGA

Coding sequence (CDS)

ATGACAATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGATCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAGGATCGATGTCGACAACCAGCTCGAAATTGA

Protein sequence

MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN

Homology

[Close]

BLAST of IVF0015256 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 114

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 95
           ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN
Sbjct: 115 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 148

[Close]

BLAST of IVF0015256 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
          MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60

Query: 61 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 95
          ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN
Sbjct: 61 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94

[Close]

BLAST of IVF0015256 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.1e-39
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           M MMPTFGAGYCDS++ TGYYDAG+GP SSYMDV PS SYMHGHGRGYG+HNEYLYHEAP
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAP 108

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 95
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 109 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 142

[Close]

BLAST of IVF0015256 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTF AGYCD ++G GYYDAGVGPSSSY+DV PSTSYMHGH RGYG+HNEYLYHEAP
Sbjct: 120 MTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAP 179

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 95
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 180 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 213

[Close]

BLAST of IVF0015256 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTF AGYCD ++G GYYDAGVGPSSSY+DV PSTSYMHGH RGYG+HNEYLYHEAP
Sbjct: 108 MTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAP 167

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 95
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 168 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 201

[Close]

BLAST of IVF0015256 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (495), Expect = 8.93e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
          MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60

Query: 61 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94
          ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN
Sbjct: 61 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94

[Close]

BLAST of IVF0015256 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (495), Expect = 5.05e-62
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 114

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94
           ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN
Sbjct: 115 ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 148

[Close]

BLAST of IVF0015256 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (433), Expect = 1.55e-52
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           M MMPTFGAGYCDS++ TGYYDAG+GP SSYMDV PS SYMHGHGRGYG+HNEYLYHEAP
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAP 108

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 109 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 142

[Close]

BLAST of IVF0015256 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (428), Expect = 7.98e-51
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTF AGYCD ++G GYYDAGVGPSSSY+DV PSTSYMHGH RGYG+HNEYLYHEAP
Sbjct: 120 MTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAP 179

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 180 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 213

[Close]

BLAST of IVF0015256 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (426), Expect = 1.12e-50
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAP 60
           MTMMPTF AGYCD ++G GYYDAGVGPSSSY+DV PSTSYMHGH RGYG+HNEYLYHEAP
Sbjct: 108 MTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAP 167

Query: 61  ADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 94
           ADVSDRQEYQQEPENQEDREQHRVQ R RQP RN
Sbjct: 168 ADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 201

The following BLAST results are available for this feature:

BLAST of IVF0015256 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMS3	2.0e-46	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U3Y0	2.0e-46	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3CXX3	3.1e-39	87.23	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7V342	1.2e-38	87.23	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BSG8	2.0e-38	87.23	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]

BLAST of IVF0015256 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048355.1	8.93e-63	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	5.05e-62	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0049532.1	1.55e-52	87.23	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0062642.1	7.98e-51	87.23	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK01176.1	1.12e-50	87.23	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]

BLAST of IVF0015256 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015256.1	IVF0015256.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance