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IVF0014394 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATGCATGCAATGAGGAGTTTGGGGACAAAATCCACCTTGGTGAGATAACTTCCATCACTTGTGACCCAAAAGCAGAACAAGTGTGGGTACTTGGCGCCAAGAGGTTGTCACCCTTAAAAGAGAATTACTATAAATCTTGTAAGCAACAACTCCTAGATTTATATTGA ATGGCTAATGCATGCAATGAGGAGTTTGGGGACAAAATCCACCTTGGTGAGATAACTTCCATCACTTGTGACCCAAAAGCAGAACAAGTGTGGGTACTTGGCGCCAAGAGGTTGTCACCCTTAAAAGAGAATTACTATAAATCTTGTAAGCAACAACTCCTAGATTTATATTGA ATGGCTAATGCATGCAATGAGGAGTTTGGGGACAAAATCCACCTTGGTGAGATAACTTCCATCACTTGTGACCCAAAAGCAGAACAAGTGTGGGTACTTGGCGCCAAGAGGTTGTCACCCTTAAAAGAGAATTACTATAAATCTTGTAAGCAACAACTCCTAGATTTATATTGA MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY Homology
BLAST of IVF0014394 vs. ExPASy TrEMBL
Match: A0A5D3C951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00010 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14 Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of IVF0014394 vs. ExPASy TrEMBL
Match: A0A5D3CY29 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00960 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.5e-06 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of IVF0014394 vs. ExPASy TrEMBL
Match: A0A5D3DDG5 (Cytochrome b561 and DOMON domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00260 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of IVF0014394 vs. ExPASy TrEMBL
Match: A0A5A7V332 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001430 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.3e-04 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
BLAST of IVF0014394 vs. NCBI nr
Match: TYK07860.1 (uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 5.64e-19 Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of IVF0014394 vs. NCBI nr
Match: KAA0032002.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK16823.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 3.79e-09 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of IVF0014394 vs. NCBI nr
Match: KAA0026294.1 (cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa] >TYK21490.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 6.65e-08 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of IVF0014394 vs. NCBI nr
Match: KAA0062632.1 (uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]) HSP 1 Score: 52.0 bits (123), Expect = 3.57e-06 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
BLAST of IVF0014394 vs. NCBI nr
Match: TYJ98051.1 (LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]) HSP 1 Score: 50.4 bits (119), Expect = 1.84e-05 Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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