IVF0014178 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACCAGACCAAGAACTCGAAGCTCCGCCTCTGCCACTCCCCCCTCCGTCTCCTTCAAGACCGACCGGAAGCTCAAAGCCACCACCACGACGCCAAACACTCCGGCTACCTGTTCTACATCCATCGTTCCTTCCTCACTCAAATCAGTACGTTTTTCTTCTATTTCTCCCTCCAGTACATCACTTTCTCATATCTGATGTTTGTTTTCATATTTTCTGTGTTTTCTCTCTCTCTTAGGTTTTTCTGTTCGATTGGTGGCTGGTAAAGGCTAACGATGGCGAGGGATTGGCTATCGGAGGGTTTACATCCAGAGAGTAAGACATTGCTTCCCCTAACTCGTTCGGTTTTCTGCTTCTTATCTGCTTCCCGTGTTTTGTTTTGTTTTTTCTTTTCTGTTTGTTCTTTGAAGAAATATGTTTGAGTGACTAAATTTAGTTCCAAAAGATAGATTATTCACTGTATGTATTCTAATATTTGATATTAAAGTGAATTTGGTGAAGTTTTGAAATCTGATTGAAATCTTCTCAATAACCCACTATATAATGTGTGGAAGAGATTTAACATGTATTTACTTTTAAATAAGGTACGTATTTAGTTCGATTGGTTATCTTAGTTTTTGATACTGGAATTCATCCATGAGTATGAGGGTTAAATATTTGTCTTATTTTTTGTATTTTTAACTATGATACTTGGTGGTTTTATGGGGAGTATCTTTAGTGTTTTTGGTTTTCATTGGGAATAAAATTATTAGTTGGTGTTGGTATCCTGACCATAAAAACTCCGACTGGTTTCAGCTTTCAAATTCTAGAAAGCTCATTGTGCAACTCTCTTCATGTTATCTCTTATCAAAATAGAACCAGAATTAGTTCTTGAGAAGGGAAAGGAGGAAAGAAGTTAATAGAACTGGAGAATAAAGGAGGTGATAAAAAATCTGCTGAAGGAGCAAAAGTGAAGCCGCACGCTCTTATGCGTAATTCATTGTCCTAGGGGGAGATATTTATAATAGATGACTGATCTTCCTTTCTTTGGTTTGATTGCATAGAAAGACGATAGTTTCGTTACTTTTCATTCTCAGATACTGTATATTAAGTCTGTCCTCTTTTAGAATGGAAATTAGTGGTCTGTGCTCAAGAAAAATTATGATTCATTGTTTCAGAAGAGCTGGGATAAGAGCATTTTATCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAGCCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACTTGAAAATGGCTTTCCACCAAAGGTATGTTTTCAGGGCATTGTTCTTATTTCACCTAACTGTCTGTTCGAGTCATTGCCAATAGGTGGACTATTTTGTTAAACATATCATGTCCTGAGCATCATTGTAAGTATTTAGAAACTGACGAAAGTTCATGACATGCAAACTTGAGCAGGTGTACAATCATTTCCTTCTTGGTTTTCCCTTCAATTGGAAAGACTATATGAGATCTAGTTCGGATAGAAAATCCCCTTTCGAGTGTTTTTAAAGCAAGTACTTCTCATTCCAACGACCAAGGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAATAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAATCTAGTCATGGTCATGGCCTCTCTACGAAGAACTCAAATTCTAGTGGTAGTCCAACAAAAACTTTCAAATCTGGACTAAAGACCCCGAAAGGACCTCAACAAGTAAATTCCCATCAAGATCTCAAGGAGCAAAGTTTCTCGAATGAGGGGAAGAATAATGATGTAATAAAGGATTCGATGCACGCTAGTCAAGAAGCTAATAAGTTGGATATGGACTTCCAGATTCGAGGAAGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAACAGAAGTAAAGAGAGTCTCATATTAGATTCTCGGAAGAAGAAAAAGAGTAGAATATAG ATGGGCACCAGACCAAGAACTCGAAGCTCCGCCTCTGCCACTCCCCCCTCCGTCTCCTTCAAGACCGACCGGAAGCTCAAAGCCACCACCACGACGCCAAACACTCCGGCTACCTGTTCTACATCCATCGTTCCTTCCTCACTCAAATCAGTTTTTCTGTTCGATTGGTGGCTGGTAAAGGCTAACGATGGCGAGGGATTGGCTATCGGAGGGTTTACATCCAGAGACTGGGATAAGAGCATTTTATCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAGCCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACTTGAAAATGGCTTTCCACCAAAGGTGTACAATCATTTCCTTCTTGGTTTTCCCTTCAATTGGAAAGACTATATGAGATCTAGTTCGGATAGAAAATCCCCTTTCGAGTGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAATAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAATCTAGTCATGGTCATGGCCTCTCTACGAAGAACTCAAATTCTAGTGGTAGTCCAACAAAAACTTTCAAATCTGGACTAAAGACCCCGAAAGGACCTCAACAAGTAAATTCCCATCAAGATCTCAAGGAGCAAAGTTTCTCGAATGAGGGGAAGAATAATGATGTAATAAAGGATTCGATGCACGCTAGTCAAGAAGCTAATAAGTTGGATATGGACTTCCAGATTCGAGGAAGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAACAGAAGTAAAGAGAGTCTCATATTAGATTCTCGGAAGAAGAAAAAGAGTAGAATATAG ATGGGCACCAGACCAAGAACTCGAAGCTCCGCCTCTGCCACTCCCCCCTCCGTCTCCTTCAAGACCGACCGGAAGCTCAAAGCCACCACCACGACGCCAAACACTCCGGCTACCTGTTCTACATCCATCGTTCCTTCCTCACTCAAATCAGTTTTTCTGTTCGATTGGTGGCTGGTAAAGGCTAACGATGGCGAGGGATTGGCTATCGGAGGGTTTACATCCAGAGACTGGGATAAGAGCATTTTATCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAGCCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACTTGAAAATGGCTTTCCACCAAAGGTGTACAATCATTTCCTTCTTGGTTTTCCCTTCAATTGGAAAGACTATATGAGATCTAGTTCGGATAGAAAATCCCCTTTCGAGTGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAATAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAATCTAGTCATGGTCATGGCCTCTCTACGAAGAACTCAAATTCTAGTGGTAGTCCAACAAAAACTTTCAAATCTGGACTAAAGACCCCGAAAGGACCTCAACAAGTAAATTCCCATCAAGATCTCAAGGAGCAAAGTTTCTCGAATGAGGGGAAGAATAATGATGTAATAAAGGATTCGATGCACGCTAGTCAAGAAGCTAATAAGTTGGATATGGACTTCCAGATTCGAGGAAGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAACAGAAGTAAAGAGAGTCTCATATTAGATTCTCGGAAGAAGAAAAAGAGTAGAATATAG MGTRPRTRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLVKANDGEGLAIGGFTSRDWDKSILSAAISKRHETTILEAADGIIISISGFINRPRTLENGFPPKVYNHFLLGFPFNWKDYMRSSSDRKSPFECTSHYLEPDLDNLAITRLRDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFSNEGKNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKKKKSRI Homology
BLAST of IVF0014178 vs. ExPASy Swiss-Prot
Match: Q8RWD7 (Protein EMBRYO DEFECTIVE 1674 OS=Arabidopsis thaliana OX=3702 GN=EMB1674 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy Swiss-Prot
Match: F4KCE9 (Kinetochore-associated protein KNL-2 homolog OS=Arabidopsis thaliana OX=3702 GN=KNL2 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy TrEMBL
Match: A0A1S3BXH8 (uncharacterized protein LOC103494524 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494524 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.0e-149 Identity = 283/303 (93.40%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy TrEMBL
Match: A0A1S3BWZ5 (uncharacterized protein LOC103494524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494524 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149 Identity = 283/304 (93.09%), Postives = 286/304 (94.08%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy TrEMBL
Match: A0A5A7TRY3 (Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003680 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 9.4e-148 Identity = 280/301 (93.02%), Postives = 283/301 (94.02%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy TrEMBL
Match: A0A5D3CZJ0 (Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001130 PE=4 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 6.1e-147 Identity = 279/301 (92.69%), Postives = 282/301 (93.69%), Query Frame = 0
BLAST of IVF0014178 vs. ExPASy TrEMBL
Match: A0A0A0KZ21 (SANTA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G016400 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 4.9e-104 Identity = 223/316 (70.57%), Postives = 233/316 (73.73%), Query Frame = 0
BLAST of IVF0014178 vs. NCBI nr
Match: XP_008453960.1 (PREDICTED: uncharacterized protein LOC103494524 isoform X2 [Cucumis melo]) HSP 1 Score: 535 bits (1379), Expect = 6.54e-191 Identity = 283/303 (93.40%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of IVF0014178 vs. NCBI nr
Match: XP_008453958.1 (PREDICTED: uncharacterized protein LOC103494524 isoform X1 [Cucumis melo]) HSP 1 Score: 535 bits (1377), Expect = 1.37e-190 Identity = 283/304 (93.09%), Postives = 286/304 (94.08%), Query Frame = 0
BLAST of IVF0014178 vs. NCBI nr
Match: KAA0044617.1 (mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 529 bits (1362), Expect = 1.72e-178 Identity = 280/301 (93.02%), Postives = 283/301 (94.02%), Query Frame = 0
BLAST of IVF0014178 vs. NCBI nr
Match: TYK16972.1 (mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 526 bits (1355), Expect = 1.93e-177 Identity = 279/301 (92.69%), Postives = 282/301 (93.69%), Query Frame = 0
BLAST of IVF0014178 vs. NCBI nr
Match: XP_004152288.1 (uncharacterized protein LOC101215879 [Cucumis sativus] >KAE8649115.1 hypothetical protein Csa_014544 [Cucumis sativus]) HSP 1 Score: 393 bits (1009), Expect = 6.50e-135 Identity = 223/304 (73.36%), Postives = 233/304 (76.64%), Query Frame = 0
BLAST of IVF0014178 vs. TAIR 10
Match: AT1G58210.1 (kinase interacting family protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 0
BLAST of IVF0014178 vs. TAIR 10
Match: AT5G02520.1 (CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 2.2e-11 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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