IVF0014079 (gene) Melon (IVF77) v1

Overview


Name	IVF0014079
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Polyprotein
Location	chr01: 15395207 .. 15395596 (-)
RNA-Seq Expression	IVF0014079
Synteny	IVF0014079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCCTCAATACAATCAGCTACGATTCTCCAAAAAATTTTCCTATCAAGGTTTACAACACTAATATGAAGAATCATTACAAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACGCCTAGATTTTCGATCATTTGATGGAAATAATATTGAAACTTGGAACATTGATGGATGTTCTGAAGGGCAGATGATGATCATCTTTCAAGAAATGTTTGTTGCTGCAACAAGCTATCTTAGAAGAATGAGTCAAAGAGAGATTGTTGACGCCTTAACTGCAGGGTTTACAGGAAACCTCAGAAATTGGTGGCACAATCGTCTTACTGATGCAAATAGAGAAGCCTTAAAGAACGTTGTTTTGGAAAAATACAGAACAAGAACCTAA

mRNA sequence

ATGGGAAGCCTCAATACAATCAGCTACGATTCTCCAAAAAATTTTCCTATCAAGGTTTACAACACTAATATGAAGAATCATTACAAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACGCCTAGATTTTCGATCATTTGATGGAAATAATATTGAAACTTGGAACATTGATGGATGTTCTGAAGGGCAGATGATGATCATCTTTCAAGAAATGTTTGTTGCTGCAACAAGCTATCTTAGAAGAATGAGTCAAAGAGAGATTGTTGACGCCTTAACTGCAGGGTTTACAGGAAACCTCAGAAATTGGTGGCACAATCGTCTTACTGATGCAAATAGAGAAGCCTTAAAGAACGTTGTTTTGGAAAAATACAGAACAAGAACCTAA

Coding sequence (CDS)

ATGGGAAGCCTCAATACAATCAGCTACGATTCTCCAAAAAATTTTCCTATCAAGGTTTACAACACTAATATGAAGAATCATTACAAAAGGCCATCACCACCAGATCTAGGATGGGATGACTTACGCCTAGATTTTCGATCATTTGATGGAAATAATATTGAAACTTGGAACATTGATGGATGTTCTGAAGGGCAGATGATGATCATCTTTCAAGAAATGTTTGTTGCTGCAACAAGCTATCTTAGAAGAATGAGTCAAAGAGAGATTGTTGACGCCTTAACTGCAGGGTTTACAGGAAACCTCAGAAATTGGTGGCACAATCGTCTTACTGATGCAAATAGAGAAGCCTTAAAGAACGTTGTTTTGGAAAAATACAGAACAAGAACCTAA

Protein sequence

MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDGCSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNVVLEKYRTRT

Homology

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BLAST of IVF0014079 vs. ExPASy TrEMBL
Match: A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.0e-70
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG
Sbjct: 180 MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 239

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV
Sbjct: 240 CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 299

Query: 121 VLEKYRTRT 130
           VLEKYRTRT
Sbjct: 300 VLEKYRTRT 308

[Close]

BLAST of IVF0014079 vs. ExPASy TrEMBL
Match: A0A5A7SXJ8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK  PIK+YNT+MKNHYKRPSPPDLG DDLRLDFRSFDGNNIETWNIDG
Sbjct: 75  MGSLNTISYDSPKILPIKIYNTDMKNHYKRPSPPDLGCDDLRLDFRSFDGNNIETWNIDG 134

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLR+WWHN LTDANREA+K+ 
Sbjct: 135 CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRSWWHNHLTDANREAIKDA 194

Query: 121 VLEK 125
           +LEK
Sbjct: 195 ILEK 198

[Close]

BLAST of IVF0014079 vs. ExPASy TrEMBL
Match: A0A5D3C8Y5 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00920 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK  PIKVYNT+MKNHYKR SP DLGWDDLRLDFRSFDGNNIETWNIDG
Sbjct: 1   MGSLNTISYDSPKILPIKVYNTDMKNHYKRSSPSDLGWDDLRLDFRSFDGNNIETWNIDG 60

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQM+IIFQE+FVAATSYLRRMSQREI+DALTAGFTGNLR+WWHN LTDANREA+K+ 
Sbjct: 61  CSEGQMIIIFQEIFVAATSYLRRMSQREIIDALTAGFTGNLRSWWHNHLTDANREAIKDA 120

Query: 121 VLEK 125
           VLEK
Sbjct: 121 VLEK 124

[Close]

BLAST of IVF0014079 vs. ExPASy TrEMBL
Match: A0A5D3DBQ3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.3e-58
Identity = 111/128 (86.72%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MG+LNTISYDS K  PIKVYNTNMKNHYK+PSPPDLGWDDLR DFRSFD NNIETWNIDG
Sbjct: 75  MGNLNTISYDSLKILPIKVYNTNMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDG 134

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQM IIFQEMFVAATSYLRRMSQREIVDALT GFTGNLR+WWHN LTD NREA+K+ 
Sbjct: 135 CSEGQMAIIFQEMFVAATSYLRRMSQREIVDALTTGFTGNLRSWWHNHLTDENREAIKDA 194

Query: 121 VLEKYRTR 129
           VLEK  TR
Sbjct: 195 VLEKNGTR 202

[Close]

BLAST of IVF0014079 vs. ExPASy TrEMBL
Match: A0A5A7ULL8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00530 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.0e-58
Identity = 107/124 (86.29%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK+ PIKVYNT+MKNHY+RPSPPDLGWD+LRLDFRSFDGNNIETW+IDG
Sbjct: 1   MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 60

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQE+FVAATSY+RRMSQREIVD L  GFT NLR+WWHN LTDANREA+K  
Sbjct: 61  CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 120

Query: 121 VLEK 125
           VLEK
Sbjct: 121 VLEK 124

[Close]

BLAST of IVF0014079 vs. NCBI nr
Match: KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 1.46e-89
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG
Sbjct: 180 MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 239

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV
Sbjct: 240 CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 299

Query: 121 VLEKYRTRT 129
           VLEKYRTRT
Sbjct: 300 VLEKYRTRT 308

[Close]

BLAST of IVF0014079 vs. NCBI nr
Match: KAA0033915.1 (polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (614), Expect = 4.02e-78
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK  PIK+YNT+MKNHYKRPSPPDLG DDLRLDFRSFDGNNIETWNIDG
Sbjct: 75  MGSLNTISYDSPKILPIKIYNTDMKNHYKRPSPPDLGCDDLRLDFRSFDGNNIETWNIDG 134

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLR+WWHN LTDANREA+K+ 
Sbjct: 135 CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRSWWHNHLTDANREAIKDA 194

Query: 121 VLEK 124
           +LEK
Sbjct: 195 ILEK 198

[Close]

BLAST of IVF0014079 vs. NCBI nr
Match: KAA0056803.1 (polyprotein [Cucumis melo var. makuwa] >TYJ99927.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (591), Expect = 2.48e-76
Identity = 107/124 (86.29%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK+ PIKVYNT+MKNHY+RPSPPDLGWD+LRLDFRSFDGNNIETW+IDG
Sbjct: 1   MGSLNTISYDSPKSLPIKVYNTDMKNHYRRPSPPDLGWDNLRLDFRSFDGNNIETWSIDG 60

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQMMIIFQE+FVAATSY+RRMSQREIVD L  GFT NLR+WWHN LTDANREA+K  
Sbjct: 61  CSEGQMMIIFQEIFVAATSYIRRMSQREIVDVLIVGFTRNLRSWWHNHLTDANREAIKEA 120

Query: 121 VLEK 124
           VLEK
Sbjct: 121 VLEK 124

[Close]

BLAST of IVF0014079 vs. NCBI nr
Match: KAA0050633.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK07800.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 237 bits (604), Expect = 6.09e-76
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MGSLNTISYDSPK  PIKVYNT+MKNHYKR SP DLGWDDLRLDFRSFDGNNIETWNIDG
Sbjct: 1   MGSLNTISYDSPKILPIKVYNTDMKNHYKRSSPSDLGWDDLRLDFRSFDGNNIETWNIDG 60

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQM+IIFQE+FVAATSYLRRMSQREI+DALTAGFTGNLR+WWHN LTDANREA+K+ 
Sbjct: 61  CSEGQMIIIFQEIFVAATSYLRRMSQREIIDALTAGFTGNLRSWWHNHLTDANREAIKDA 120

Query: 121 VLEK 124
           VLEK
Sbjct: 121 VLEK 124

[Close]

BLAST of IVF0014079 vs. NCBI nr
Match: TYK21071.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (592), Expect = 2.19e-75
Identity = 111/128 (86.72%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGSLNTISYDSPKNFPIKVYNTNMKNHYKRPSPPDLGWDDLRLDFRSFDGNNIETWNIDG 60
           MG+LNTISYDS K  PIKVYNTNMKNHYK+PSPPDLGWDDLR DFRSFD NNIETWNIDG
Sbjct: 75  MGNLNTISYDSLKILPIKVYNTNMKNHYKKPSPPDLGWDDLRPDFRSFDKNNIETWNIDG 134

Query: 61  CSEGQMMIIFQEMFVAATSYLRRMSQREIVDALTAGFTGNLRNWWHNRLTDANREALKNV 120
           CSEGQM IIFQEMFVAATSYLRRMSQREIVDALT GFTGNLR+WWHN LTD NREA+K+ 
Sbjct: 135 CSEGQMAIIFQEMFVAATSYLRRMSQREIVDALTTGFTGNLRSWWHNHLTDENREAIKDA 194

Query: 121 VLEKYRTR 128
           VLEK  TR
Sbjct: 195 VLEKNGTR 202

The following BLAST results are available for this feature:

BLAST of IVF0014079 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0014079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLG3	6.0e-70	100.00	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE...	[more]
A0A5A7SXJ8	1.9e-60	91.13	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00890 PE=...	[more]
A0A5D3C8Y5	2.8e-59	89.52	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17...	[more]
A0A5D3DBQ3	5.3e-58	86.72	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00350 PE...	[more]
A0A5A7ULL8	9.0e-58	86.29	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00530 PE...	[more]

BLAST of IVF0014079 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049723.1	1.46e-89	100.00	polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var...	[more]
KAA0033915.1	4.02e-78	91.13	polyprotein [Cucumis melo var. makuwa] >TYK01297.1 polyprotein [Cucumis melo var...	[more]
KAA0056803.1	2.48e-76	86.29	polyprotein [Cucumis melo var. makuwa] >TYJ99927.1 polyprotein [Cucumis melo var...	[more]
KAA0050633.1	6.09e-76	89.52	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK07800.1 Enzymatic polyprote...	[more]
TYK21071.1	2.19e-75	86.72	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0014079 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014079.1	IVF0014079.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0016787	hydrolase activity